Ubuntu: Difference between revisions

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= Ubuntu installer =
= Ubuntu installer =


* updated for Ububtu LTS 20.04.01
* updated for Ububtu LTS 20.04.01, 22.04.1


* download the latest Ubuntu LTS desktop installer iso image
* download the latest Ubuntu LTS desktop installer iso image
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* right-click on the desktop, say "open in terminal", a shell will open
* right-click on the desktop, say "open in terminal", a shell will open
* say "sudo /bin/bash", enter the root password, you now have the root shell
* say "sudo /bin/bash", enter the root password, you now have the root shell
* run nm-connection-editor to configure the network
* run nm-connection-editor to configure the network. use netmask 255.255.224.0, gateway 142.90.100.18, DNS 142.90.100.19, search path "triumf.ca"
* after network is up (can ping ladd00), continue with post-installation steps below
* after network is up (can ping ladd00), continue with post-installation steps below


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== prepare ==
== prepare ==
<pre>
<pre>
apt-get update
apt update
apt-get upgrade
apt upgrade
</pre>
</pre>


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<pre>
<pre>
apt install ssh
apt install ssh
</pre>
== install git/scripts ==
<pre>
apt -y install git
mkdir ~root/git
cd ~root/git
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd scripts
git pull
</pre>
</pre>


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this is a good point to reboot the machine to boot
this is a good point to reboot the machine to boot
the latest kernel and to set the correct hostname
the latest kernel and to set the correct hostname
== install etckeeper ==
keep contents of /etc in a git repository:
<pre>
apt -y install etckeeper
</pre>
== set timezone ==
<pre>
timedatectl list-timezones | grep -i vancouver
timedatectl set-timezone America/Vancouver
</pre>


== install time synchronization ==
== install time synchronization ==
<pre>
<pre>
apt-get -y install chrony
apt -y install chrony
echo server time1.triumf.ca iburst >> /etc/chrony/chrony.conf
#echo server time1.triumf.ca iburst >> /etc/chrony/chrony.conf
echo server time2.triumf.ca iburst >> /etc/chrony/chrony.conf
#echo server time2.triumf.ca iburst >> /etc/chrony/chrony.conf
echo server time3.triumf.ca iburst >> /etc/chrony/chrony.conf
#echo server time3.triumf.ca iburst >> /etc/chrony/chrony.conf
cd ~/git/scripts
git pull
cd ~
cp ~/git/scripts/etc/triumf.sources /etc/chrony/sources.d/
systemctl disable systemd-timesyncd.service
systemctl disable systemd-timesyncd.service
systemctl stop systemd-timesyncd.service
systemctl stop systemd-timesyncd.service
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</pre>
</pre>


== enable outgoing email (debian 11) ==
NOTE1: if time1, time2, time3 are already listed in /etc/crony/chrony.conf, please remove them and restart chrony.
 
NOTE2: if time1, time2, time3 are not listed in "chronyc tracking" or if they are not selected by "chronyc tracking", check that /etc/crony/chrony.conf contains "sourcedir /etc/chrony/sources.d". old versions of this file may not have it.
 
NOTE3: read https://chrony-project.org/faq.html#_should_i_prefer_chrony_over_timesyncd_if_i_do_not_need_to_run_a_server
 
== reenable systemd-timesyncd ==
 
ONLY IF CHRONY DOES NOT WORK


this is different from ubuntu 20. it uses /etc/mailname and it hardwires the hostname into main.cf.
To configure systemd-timesyncd, set "NTP=" in /etc/systemd/timesyncd.conf
 
<pre>
apt remove chrony
cat /etc/systemd/timesyncd.conf
systemctl enable systemd-timesyncd.service
systemctl restart systemd-timesyncd.service
systemctl status systemd-timesyncd.service
timedatectl status
timedatectl timesync-status
</pre>
 
== enable outgoing email (debian 11) ==
 
this is different from ubuntu 20. it uses /etc/mailname and it hardwires the hostname into main.cf.
 
== enable outgoing email ==
 
we have an unusual email configuration. outgoing email should work to deliver error messages, notices, etc. incoming email is disabled, we do not receive email for local users.
 
this causes problems with TRIUMF smtp server. if our message cannot be delivered (wrong email address or receipient computer is turned off), TRIUMF smtp server will generate a delivery failure notification email and try to send it to the "from" address of the failed message. but the "from" address does not receive any email, so another delivery failure  notification email is generated and an attempt to deliver it. which again fails, rinse and repeat.
 
as solution, kray created a special rule, email from scrap.triumf.ca does not generate delivery failure notices. failed messages sit in the queue for 5 days, then they are deleted. (K.O. - confirmed with kray 3jan2024).
 
to make this work we use the msmtp MTA package.
 
<pre>
cd ~
apt -y remove postfix
apt -y purge postfix # remove old config files
apt -y install mailutils msmtp msmtp-mta # say "no" to apparmor support
apt -y install bsd-mailx
cd ~/git/scripts/etc
git pull
/bin/cp -fv aliases /etc/aliases
/bin/cp -fv msmtprc /etc/msmtprc
/bin/rm -vf ~root/.forward
/bin/rm -vf /etc/mailname
Mail root
Subject: test
test
^D
CC: <CR>
</pre>
 
== enable outgoing email (postfix) ==
 
THIS IS OBSOLETE!!!
 
* TRIUMF: use smtp.triumf.ca
* CERN: use cernmx.cern.ch


== enable outgoing email ==
<pre>
<pre>
dpkg-reconfigure postfix ### or
apt install postfix ### select "satellite system", enter full hostname "xxx.triumf.ca", enter "smtp.triumf.ca"
apt install postfix ### select "satellite system", enter full hostname "xxx.triumf.ca", enter "smtp.triumf.ca"
echo olchansk@triumf.ca >> ~root/.forward
apt install mailutils
apt-get install -y mailutils
dpkg-reconfigure postfix ### (if postfix already installed)
</pre>
<pre>
echo olchansk@triumf.ca lindner@triumf.ca bsmith@triumf.ca >> ~root/.forward
mailx root
mailx root
test
test
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</pre>
</pre>


== install missing packages ==
== enable ping for all users (debian 11) ==


(apt eats terminal input, even the "yes |" trick does not quite work,
Without this tweak, Debian will report "operation not permitted" if a user tries to ping somewhere.
repeat the following commands until they report that everything
is installed)


<pre>
<pre>
yes | apt -y install ssh tcsh ethtool ncat rsync strace net-tools sysstat smartmontools lm-sensors traceroute time minicom screen git lsof
echo 'net.ipv4.ping_group_range = 0 1000' > /etc/sysctl.d/99-ping.conf
</pre>
 
== disable apparmor ==
 
On NFS-Root network booted machines!
 
If "man man" returns "permission denied" and syslog reports apparmor "sendmsg DENIED" errors, disable apparmor. This is supposedly fixed in kernel 6.0 and later (to be confirmed), see https://bugs.launchpad.net/ubuntu/+source/apparmor/+bug/1784499
 
Disable apparmor, see https://ubuntu.com/server/docs/security-apparmor
 
This takes effect after a reboot.
 
<pre>
systemctl stop apparmor.service
systemctl disable apparmor.service
</pre>
 
== install missing packages ==
 
(apt eats terminal input, even the "yes |" trick does not quite work,
repeat the following commands until they report that everything
is installed)
 
<pre>
yes | apt -y install ssh tcsh ethtool ncat rsync strace net-tools sysstat smartmontools lm-sensors traceroute time minicom screen git lsof debsums tmux iptables
yes | apt -y install lsb-release
yes | apt -y install lsb-release
yes | apt -y install flex bison
yes | apt -y install flex bison
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yes | apt -y install snmp snmp-mibs-downloader
yes | apt -y install snmp snmp-mibs-downloader
yes | apt -y install git subversion g++ gfortran cmake doxygen
yes | apt -y install git subversion g++ gfortran cmake doxygen
yes | apt -y install python
yes | apt -y install curl libcurl4 libcurl4-openssl-dev
yes | apt -y install curl libcurl4 libcurl4-openssl-dev
yes | apt -y install mariadb-client ### mysql client
yes | apt -y install mariadb-client ### mysql client
yes | apt -y install libz-dev sqlite3 libsqlite3-dev unixodbc-dev
yes | apt -y install libz-dev libzstd-dev sqlite3 libsqlite3-dev unixodbc-dev
yes | apt -y install libssl-dev
yes | apt -y install libssl-dev
yes | apt -y install emacs xemacs21
yes | apt -y install emacs xemacs21 joe
yes | apt -y install gnuplot dos2unix
yes | apt -y install mutt bsd-mailx # email clients
yes | apt -y install mutt bsd-mailx # email clients
yes | apt -y install liblz4-tool pbzip2
yes | apt -y install liblz4-tool pbzip2
yes | apt -y install libc6-dev-i386 # otherwise no /usr/include/sys/types.h
yes | apt -y install libc6-dev-i386 # otherwise no /usr/include/sys/types.h
yes | apt -y install libreadline-dev
yes | apt -y install libreadline-dev
yes | apt -y install chromium-browser chromium-codecs-ffmpeg-extra
yes | apt -y install ubuntu-mate-themes
yes | apt -y install ubuntu-mate-themes
yes | apt -y install libmotif-dev libxmu-dev
yes | apt -y install libmotif-dev libxmu-dev
yes | apt -y install libusb-dev libusb-1.0-0-dev
yes | apt -y install i2c-tools libi2c-dev libi2c0
yes | apt -y install xfig gsfonts-x11 gsfonts-other # install fonts for xfig
yes | apt -y install xfig gsfonts-x11 gsfonts-other # install fonts for xfig
yes | apt -y install libjson-perl
yes | apt -y install libjson-perl
yes | apt -y install libgsl-dev # additional GNU Scientific Library
yes | apt -y install libgsl-dev # additional GNU Scientific Library
yes | apt -y install qt5-default # Qt development
yes | apt -y install python3-full python3-dev python3-dbg python3-pip ### for pyROOT
yes | apt -y install imagemagick imagemagick-common ckeditor # for elog
yes | apt -y install libjpeg-dev libjpeg-progs libjpeg-tools
yes | apt -y install linux-tools-common linux-tools-generic # cpupower frequency-info
yes | apt -y install linux-tools-common linux-tools-generic # cpupower frequency-info
yes | apt -y install rdesktop remmina remmina-plugin"*" # requested by POL
yes | apt -y install nlohmann-json3-dev # required to build MIDAS with ROOT 6.30 on Ubuntu-22
yes | apt -y install dpkg-dev cmake g++ gcc binutils libx11-dev libxpm-dev libxft-dev libxext-dev python3 libssl-dev libafterimage0 # from https://root.cern/install/dependencies/
yes | apt -y install apt install gfortran libpcre3-dev xlibmesa-glu-dev libglew-dev libftgl-dev libmysqlclient-dev libfftw3-dev libcfitsio-dev graphviz-dev libavahi-compat-libdnssd-dev libldap2-dev python3-dev python3-numpy libxml2-dev libkrb5-dev libgsl0-dev qtwebengine5-dev nlohmann-json3-dev # from https://root.cern/install/dependencies/
</pre>
Ubuntu LTS 20.04:
<pre>
yes | apt -y install linux-image-generic-hwe-20.04 linux-tools-virtual-hwe-20.04 # enable linux 5.11 series kernel
yes | apt -y install linux-image-generic-hwe-20.04 linux-tools-virtual-hwe-20.04 # enable linux 5.11 series kernel
</pre>
</pre>


== install git/scripts ==
Ubuntu LTS 22.04:
<pre>
<pre>
mkdir ~root/git
apt -y install linux-generic-hwe-22.04 # enable linux 6.2.0 series kernel
cd ~root/git
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd scripts
git pull
</pre>
</pre>


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</pre>
</pre>


== install ganglia ==
== configure DNS ==


<pre>
<pre>
yes | apt-get -y install ganglia-monitor
cd ~/git/scripts
systemctl enable ganglia-monitor
</pre>
<pre>
cd ~root/git/scripts
git pull
git pull
cp etc/gmond-ubuntu.conf /etc/ganglia/gmond.conf
mkdir /etc/systemd/resolved.conf.d
systemctl restart ganglia-monitor
cp etc/resolved-triumf.conf /etc/systemd/resolved.conf.d/
systemctl status ganglia-monitor
systemctl restart systemd-resolved
ps -efw | grep gmond
resolvectl
#systemd-analyze cat-config systemd/resolved.conf
</pre>
</pre>
== install ganglia ==
<pre>
<pre>
apt -y install ganglia-monitor
cd ~root/git/scripts/ganglia
cd ~root/git/scripts/ganglia
git pull
make install
make install
./ganglia-all.perl
./ganglia-all.perl
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mkdir ~/git
mkdir ~/git
cd ~/git
cd ~/git
git clone https://bitbucket.org/dd1/gonodeinfo.git
#git clone https://bitbucket.org/dd1/gonodeinfo.git
git clone https://daq00.triumf.ca/~olchansk/git/gonodeinfo.git
cd gonodeinfo
cd gonodeinfo
git pull
git pull
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* edit /etc/gonodeinfo.conf
* edit /etc/gonodeinfo.conf
* change "Description", "Location", "User" and "Administrator" as appropriate (or delete them)
* change "Description", "Location", "User" and "Administrator" as appropriate (or delete them)
* change "Servers" to read: Servers: ladd00.triumf.ca:8601
* change "Servers" to read: Servers: daq00.triumf.ca:8601
* run gonodeinfo
* run "gonodeinfo -v"
* if error is "connection refused". go to the nodeinfo server to add this client to the access control list:
* if error is "connection refused". go to the nodeinfo server to add this client to the access control list:
* on the gonodeinfo server: run gonodereceive -a daq13
* on the gonodeinfo server: run /opt/gonodeinfo/gonodereceive.exe -a daq13
* try gonodeinfo again, there should be no error
* try gonodeinfo again, there should be no error
* on the gonodeinfo server: run gonodereport, look at the web pages, the new machine should be listed now
* on the gonodeinfo server: run gonodereport, look at the web pages, the new machine should be listed now
== install fonts for EPICS ==
* apt install xfonts-100dpi xfonts-75dpi
* restart Xorg (i.e. "killall Xorg", this will log you out from the console)
* xlsfonts | grep -i helvetica ### should show fonts with different sizes, not just size 0 (scalable)


== install libz.so.1 for CentOS compatibility ==
== install libz.so.1 for CentOS compatibility ==
KO - confirm which versions on quartus need this.


<pre>
<pre>
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wget http://ftp.ca.debian.org/debian/pool/main/libp/libpng/libpng12-0_1.2.50-2+deb8u2_amd64.deb
wget http://ftp.ca.debian.org/debian/pool/main/libp/libpng/libpng12-0_1.2.50-2+deb8u2_amd64.deb
dpkg --install libpng12-0_1.2.50-2+deb8u2_amd64.deb
dpkg --install libpng12-0_1.2.50-2+deb8u2_amd64.deb
</pre>
== install libpng12.so.0 for Quartus 13.0sp1 ==
<pre>
wget https://daq00.triumf.ca/~olchansk/linux/libpng12.so.0
wget https://daq00.triumf.ca/~olchansk/linux/libpng12.so.0.50.0
/bin/cp -pv libpng12.so.0 libpng12.so.0.50.0 /lib/x86_64-linux-gnu/
</pre>
== install packages for Xilinx ==
ubuntu LTS 22.04 vivado 2020.1
<pre>
apt install autoconf libtool
apt install libtinfo5
apt install texinfo
apt install zlib1g:i386
</pre>
</pre>


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<pre>
<pre>
apt-get -y install libx11-dev libxpm-dev libxft-dev libxext-dev libpng-dev libjpeg-dev xlibmesa-glu-dev libxml2-dev libgsl-dev cmake
apt -y install libx11-dev libxpm-dev libxft-dev libxext-dev libpng-dev libjpeg-dev xlibmesa-glu-dev libxml2-dev libgsl-dev cmake
</pre>
</pre>


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physica
physica
@rangauss.pcm
@rangauss.pcm
</pre>
== install lightdm ==
unlike the default gdm login manager, lightdm shows the machine hostname and does not require an extra mouse click to swicth from screen saver to login mode.
<pre>
apt -y install lightdm
# select lightdm
</pre>
</pre>


== install desktop environments ==
== install desktop environments ==
note: default display manager and default desktop are deficient, please do not skip this step.


note: if apt asks to choose the display manager, select "lightdm"
note: if apt asks to choose the display manager, select "lightdm"
note: KO - I recommend the "MATE" desktop.
note: you will have to cut-and-paste this several times because "apt" eats commands, even with "-y" and even piped from "yes".


<pre>
<pre>
# install MATE desktop
# install MATE desktop
yes | apt-get -y install ubuntu-mate-core ubuntu-mate-desktop ubuntu-mate-themes
DEBIAN_FRONTEND=noninteractive apt -y install ubuntu-mate-core ubuntu-mate-desktop ubuntu-mate-themes
# install Cinnamon desktop
# install Cinnamon desktop
yes | apt-get -y install cinnamon
DEBIAN_FRONTEND=noninteractive apt -y install cinnamon
# install KDE desktop
# install KDE desktop
yes | apt-get -y install kubuntu-desktop
DEBIAN_FRONTEND=noninteractive apt -y install kubuntu-desktop
# install Lxqt desktop
# install Lxqt desktop
yes | apt-get -y install lxqt
DEBIAN_FRONTEND=noninteractive apt -y install lxqt
# install Xfce4 desktop
# install Xfce4 desktop
yes | apt-get -y install xfce4
DEBIAN_FRONTEND=noninteractive apt -y install xfce4
</pre>
</pre>


== install ROOT ==
== install ROOT ==


Please install ROOT per instructions at http://root.cern.ch.
Please install ROOT per instructions at https://root.cern.ch.


NOTE1: The ROOT package available from Ubuntu repositories is severely out of date and cannot be used with MIDAS and ROOTANA. ### DO NOT DO THIS! apt-get install root-system
NOTE1: The ROOT package available from Ubuntu repositories is severely out of date and cannot be used with MIDAS and ROOTANA. ### DO NOT DO THIS! apt-get install root-system
Line 331: Line 495:


== Install x2go ==
== Install x2go ==
KO - is this still needed? does it cause any security problems?


x2go instructions, thanks to Art O.
x2go instructions, thanks to Art O.
Line 340: Line 506:
</pre>
</pre>


== Post installation ==
== enable root login from ladd00/daq00 ==
 
* setup hostname
<pre>
<pre>
xemacs -nw /etc/hostname ### add .triumf.ca to the hostname if it is missing
ssh localhost
CTRL-C
/bin/cp ~root/git/scripts/etc/authorized_keys ~root/.ssh/
</pre>
</pre>


* install Konstantin's scripts
== disable ssh access from outside of TRIUMF ==
 
to stop ssh login spam, disable ssh access from outside of TRIUMF. this can be done by requesting a firewall block through the helpdesk or by local firewall rule:
 
<pre>
<pre>
mkdir ~root/git
echo iptables -I INPUT ! -s 142.90.0.0/255.255.0.0 -p tcp --dport 22 -j REJECT >> /etc/rc.local
cd ~root/git
/etc/rc.local
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd scripts
git pull
</pre>
</pre>


* enable root login from ladd00/daq00
== install smart-status ==
<pre>
<pre>
ssh localhost
ln -s ~/git/scripts/smart-status/smart-status.perl ~root/
CTRL-C
/bin/cp ~root/git/scripts/etc/authorized_keys ~root/.ssh/
</pre>
</pre>


* install smart-status
== enable boot menu and boot messages ==
 
This will enable the grub menu (with a 10 sec timeout) and
replace black screen with exciting linux boot messages.
 
* emacs -nw /etc/default/grub
<pre>
<pre>
ln -s ~/git/scripts/smart-status/smart-status.perl .
GRUB_DEFAULT=0
#GRUB_TIMEOUT_STYLE=hidden
GRUB_TIMEOUT=10
GRUB_DISTRIBUTOR=`lsb_release -i -s 2> /dev/null || echo Debian`
#GRUB_CMDLINE_LINUX_DEFAULT="vga=769 video=640x480"
GRUB_CMDLINE_LINUX_DEFAULT=""
GRUB_CMDLINE_LINUX=""
#GRUB_GFXMODE=640x480
</pre>
</pre>
 
* update grub config:
* install ganglia additional data
<pre>
<pre>
cd ~/git/scripts/ganglia
grub-mkconfig -o /boot/grub/grub.cfg
make
</pre>
</pre>


= Enable automatic updates =
== reboot ==
 
this completes installation of the base system.
 
following sections modify basic ubuntu to fix known problems and to enable special stuff.
 
= Enable automatic updates =
 
<pre>
apt install unattended-upgrades
cd ~/git/scripts
git pull
/bin/cp -v etc/99apt-conf-ko /etc/apt/apt.conf.d/
apt-config dump | grep Unattended
</pre>
 
Following is obsolete:


* apt install unattended-upgrades
* emacs -nw /etc/apt/apt.conf.d/50unattended-upgrades
* emacs -nw /etc/apt/apt.conf.d/50unattended-upgrades
** uncomment in Allowed-Origins "-security" and "-updates"
** uncomment in Allowed-Origins "-security" and "-updates"
Line 389: Line 578:
</pre>
</pre>
* test: unattended-upgrade --dry-run -v
* test: unattended-upgrade --dry-run -v
NOTE: update-on-shutdown is disabled.
NOTE: there is no update-on-boot, but:
NOTE: if machine was off for a long time, the systemd update timer would have expired and it will fire soon after reboot, causing an automatic update run. this is unwanted, and there is no fix or workaround for it. K.O. June-2023.
= Fix bpool is full (obsolete) =
THIS IS CAUSED BY OBSOLETE PACKAGE zsys. PLEASE: apt remove zsys
!!! only if ROOT on ZFS !!!
There is an error in the zsys package that causes bpool to run out of space,
see [[#Ubuntu zsys]] for more details.
To fix:
<pre>
cd ~/git/scripts
git pull
cp etc/zsys.conf /etc/
zsysctl service reload
zsysctl service gc
zpool list bpool
zfs list bpool
df /boot
</pre>


= IPMI instructions =
= IPMI instructions =
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* ipmitool sensor ### report hardware sensors
* ipmitool sensor ### report hardware sensors


= NIS instructions (debian 11) =
= move /home/wheel =
 
note: this MUST be done if ZFS root and NIS/autofs with /home.
 
Default location of wheel's home directory will collide with autofs /home, it has to be moved,
for example to /wheel.
 
<pre>
# logout from the wheel user
# go to another computer
ssh root@daqubuntuxxx
zfs list | grep wheel ### identify zfs name wheel_xxxxxx
zfs set mountpoint=/wheel rpool/USERDATA/wheel_hm8fzh
emacs -nw /etc/passwd ### change wheel's home directory from /home/wheel to /wheel
su - wheel ### check that user wheel still works
</pre>
 
This will break wheel's ability to run snap programs, such as firefox, install chrome as listed below.
 
= enable NIS (ubuntu 22.04, debian 11) =


<pre>
<pre>
Line 418: Line 653:
</pre>
</pre>


then as below:
enable ypserv:


= NIS instructions =
<pre>
sed -i s/NISSERVER=false/NISSERVER=slave/ /etc/default/nis
/usr/lib/yp/ypinit -s daq00
echo ypserver localhost >> /etc/yp.conf
sed -i "s/ypserver .*/ypserver localhost/" /etc/yp.conf
systemctl enable ypserv
systemctl restart ypserv
systemctl restart ypbind
</pre>
 
edit /etc/nsswitch.conf to read:
 
<pre>
# begin get data from nis
passwd: files nis
group: files nis
shadow: files nis
automount:  files nis
netgroup: files nis
# end get data from nis
</pre>
 
enable hourly update of nis maps:
 
<pre>
mkdir ~root/git
cd ~root/git
git clone http://daq00.triumf.ca/~olchansk/git/scripts.git
cd ~/git/scripts/etc
git pull
ln -s $PWD/ypxfr-cron-hourly /etc/cron.hourly
</pre>
 
If this is a new machine, then on the master NIS node (daq00), add this new node to /etc/netgroup, and update NIS maps (cd /var/yp; make)
 
= enable NIS (ubuntu 20.04) =


* apt-get -y install portmap nis ### will ask for NIS domain (DAQ-NIS)
* apt-get -y install portmap nis ### will ask for NIS domain (DAQ-NIS)
Line 428: Line 698:
** set "NISSERVER=slave"
** set "NISSERVER=slave"
** Ubuntu LTS 20.04, check that "YPBINDARGS=" is blank, remove "-no-dbus" if it is there
** Ubuntu LTS 20.04, check that "YPBINDARGS=" is blank, remove "-no-dbus" if it is there
* edit /etc/yp.conf, comment-out everything, add "domain DAQ-NIS server localhost"
* #edit /etc/yp.conf, comment-out everything, add "domain DAQ-NIS server localhost"
* edit /etc/yp.conf, comment-out everything, add "ypserver localhost"
* /usr/lib/yp/ypinit -s daq00
* /usr/lib/yp/ypinit -s daq00
* systemctl enable nis
* systemctl enable nis
* systemctl restart nis
* systemctl restart nis
* ypwhich
* ypwhich -m
* ypwhich -m
* ypcat -k passwd
* ypcat -k passwd
* apt-get -y install autofs
* systemctl enable autofs
* vi /etc/nsswitch.conf ### add the automount line, modify the passwd, group and shadow lines to read this:
* vi /etc/nsswitch.conf ### add the automount line, modify the passwd, group and shadow lines to read this:
<pre>
<pre>
Line 446: Line 716:
# end get data from nis
# end get data from nis
</pre>
</pre>
* systemctl restart autofs
* enable hourly update of NIS maps
* enable hourly update of NIS maps
<pre>
<pre>
mkdir ~root/git
cd ~root/git
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd ~/git/scripts/etc
cd ~/git/scripts/etc
git pull
git pull
Line 454: Line 726:
</pre>
</pre>
* ### NOT NEEDED sudo vi /etc/idmapd.conf ### add line: "Domain = triumf.ca"
* ### NOT NEEDED sudo vi /etc/idmapd.conf ### add line: "Domain = triumf.ca"
* reboot


= Fix systemd NIS breakage =
= enable autofs =


!!! THIS IS NOT NEEDED FOR UBUNTU LTS 20.04 !!!
<pre>
apt -y install autofs
systemctl enable autofs
systemctl restart autofs
ls -l /home/olchansk ### test autofs, check file owner is correct
</pre>
 
= enable NFS server =
 
<pre>
apt install nfs-kernel-server
#edit /etc/exports
systemctl enable nfs-server
systemctl restart nfs-server
</pre>
 
= NIS master =
 
notes for setting up the NIS master
 
== wheel user ==
 
"wheel" is the default administrative user. We do not want it's password exported to NIS (encrypted password hash is world visible) and we do not want it's home directory exported to NFS (~wheel/.ssh is world visible and potentially writable: anybody can change ~wheel/.ssh/authorized_keys).
 
* move wheel's home directory from /home/wheel to /wheel (see special section about this)
* change wheel's UID and GID from 1000 to a value below MINUID in /var/yp/Makefile
 
== coherent uids ==
 
we do not want system accounts defined in /etc/passwd of the NIS master
to be included in the NIS map "passwd". this causes trouble on NIS clients
where newly installed packages fail to create local system users because same
user already exists in NIS.
 
This is controlled by MINUID in /var/yp/Makefile.
 
Historical TRIUMF uids start from around 200, but several clusters do not have any historic TRIUMF uids below 500 and MINUID is set to:
* DAQ-NIS: MINUID=200
* ISAC-NIS: MINUID=500
* TITAN-NIS: MINUID=500
* MUSR-NIS: MINUID=500
* TIG-NIS: MINUID=500 (100 on SL6 mother8pi)
 
Ubuntu 20 has two programs to create users:
* adduser - creates new users with UID 1000 and up as specified in /etc/adduser.conf. No problems here.
* adduser --system - creates new system users with UID 100 and up as specified in /etc/adduser.conf. No problems here.
* useradd - creates new users with UID 1000 and up as specified in /etc/login.defs. No problems here.
* useradd --system - creates new system users with UID 999 and down (read "man useradd", section at the end about SYS_UID_MAX). This collides with NIS MINUID, these system users will be included in the NIS map and cause trouble.
 
This problem cannot be fixed, SYS_UID_MIN, SYS_UID_MAX and UID_MIN in /etc/login.defs do not seem
to have any effect on UIDs chosen by "useradd --system". (tested on Ubuntu LTS 20.04).
 
So far only these system accounts seem to be affected by this:
* systemd-coredump
* ganglia
 
To fix:
* run "sort -r -n -t: -k3 /etc/passwd" to identify the last unused system user uid (range 100..200)
* run "sort -r -n -t: -k3 /etc/group" to identify the last unused system user gid (range 100.200)
* systemd-coredump: manually change UID and GID (package systemd-coredump is usually not installed)
* ganglia: same thing, then change ownership on all ganglia files.
 
Also read systemd author's opinion on system vs user UIDs:
https://github.com/systemd/systemd/issues/4850#issuecomment-265698275
 
= Fix systemd-logind NIS breakage =
 
!!! THIS IS NOT NEEDED FOR UBUNTU LTS 20.04 !!!


there is a delay in ssh logins for normal users. "ssh -v" shows the delay is after "pledge...". this
there is a delay in ssh logins for normal users. "ssh -v" shows the delay is after "pledge...". this
Line 474: Line 812:
</pre>
</pre>


= Configure lightdm display manager =
= Fix systemd-udevd NIS breakage =
 
see same problem as above with udev getting stuck. ubuntu lts 20.04.


* enable it
<pre>
<pre>
systemctl disable gdm
mkdir /etc/systemd/system/systemd-udevd.service.d
echo -e "[Service]\nIPAddressDeny=\n" > /etc/systemd/system/systemd-udevd.service.d/local.conf
systemctl daemon-reload
systemctl cat systemd-udevd.service
</pre>
 
= Configure USB device permissions =
 
Configure USB device permissions for user access to USB-serial devices, Altera USB Blaster, etc.
 
* create file /etc/udev/rules.d/99-usb-chmod.rules with this contents:
 
<pre>
emacs -nw /etc/udev/rules.d/99-usb-chmod.rules
ACTION=="add", SUBSYSTEM=="usbmisc", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="usb_device", RUN+="/bin/chmod a+wr /dev/%c"
ACTION=="add", SUBSYSTEM=="usb_device", RUN+="/bin/chmod a+wr /proc/%c"
ACTION=="add", ENV{DEVTYPE}=="usb_device", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", ENV{DEVTYPE}=="usb_device", RUN+="/bin/chmod a+wr $env{DEVICE}"
ACTION=="add", ENV{PHYSDEVBUS}=="usb-serial", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", ENV{DEVPATH}=="/class/tty/ttyS*", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyUSB*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyACM*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyS*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", DEVPATH=="*video*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
</pre>
 
* reload udev rules: udevadm control --reload-rules
* apply new permissions: udevadm trigger --action=add
* watch udev activity: udevadm monitor -p
 
= Configure lightdm display manager =
 
* enable it
<pre>
echo lightdm | dpkg-reconfigure -fteletype lightdm
systemctl disable gdm
systemctl disable sddm
systemctl disable sddm
systemctl enable lightdm
systemctl enable lightdm
Line 497: Line 872:
* restart lightdm
* restart lightdm
<pre>
<pre>
systemctl stop gdm
systemctl restart lightdm
systemctl restart lightdm
</pre>
</pre>
Line 510: Line 886:


= Install google-chrome =
= Install google-chrome =
<pre>
wget https://dl.google.com/linux/direct/google-chrome-stable_current_amd64.deb
dpkg -i google-chrome-stable_current_amd64.deb
</pre>
confirm autoupdate is enabled, observe dl.google.com is present in the list of repositories:
<pre>
apt update
...
Get:5 https://dl.google.com/linux/chrome/deb stable/main amd64 Packages [1,094 B]
...
</pre>
FOLLOWING IS OBSOLETE:


Instructions from here:
Instructions from here:
Line 516: Line 907:
<pre>
<pre>
wget -q -O - https://dl-ssl.google.com/linux/linux_signing_key.pub | apt-key add -
wget -q -O - https://dl-ssl.google.com/linux/linux_signing_key.pub | apt-key add -
sh -c 'echo "deb [arch=amd64] http://dl.google.com/linux/chrome/deb/ stable main" >> /etc/apt/sources.list.d/google.list'
sh -c 'echo "deb [arch=amd64] http://dl.google.com/linux/chrome/deb/ stable main" >> /etc/apt/sources.list.d/google-tmp.list'
apt update
apt update
apt install google-chrome-stable
apt install google-chrome-stable
/bin/rm -f /etc/apt/sources.list.d/google.list
/bin/rm -f /etc/apt/sources.list.d/google-tmp.list
</pre>
</pre>


= Install amanda client =
= Install amanda client =
ONLY ONE MACHINES THAT HOST HOME DIRECTORIES


* apt install amanda-client
* apt install amanda-client
Line 543: Line 936:


* in amanda disklist, use dump type "bsdtcp-comp-user-tar"
* in amanda disklist, use dump type "bsdtcp-comp-user-tar"
* su - amanda and run amcheck -c daq00
* su - amanda and run amcheck -c daily daq00
<pre>
<pre>
-bash-4.1$ amcheck -c daily daq00
-bash-4.1$ amcheck -c daily daq00
Line 558: Line 951:
For reasons unknown, Ubuntu LTS 20.04 does not enable /etc/rc.local. Do this:
For reasons unknown, Ubuntu LTS 20.04 does not enable /etc/rc.local. Do this:


* emacs -nw /etc/rc.local with this content
<pre>
<pre>
#!/bin/bash
cd ~/git/scripts
 
git pull
exit 0
cp -n -v etc/rc.local /etc/
chmod a+rx /etc/rc.local
cp etc/rc-local.service /etc/systemd/system/
systemctl daemon-reload
systemctl enable rc-local
systemctl start rc-local
systemctl status rc-local
</pre>
</pre>
* chmod a+rx /etc/rc.local
* create systemd service file /etc/systemd/system/rc-local.service
<pre>
[Unit]
Description=/etc/rc.local Support
ConditionPathExists=/etc/rc.local
After=network.target nis.service autofs.service


[Service]
= Remove unwanted packages =
Type=forking
ExecStart=/etc/rc.local start
TimeoutSec=0
StandardOutput=tty
RemainAfterExit=yes


[Install]
<pre>
WantedBy=multi-user.target
apt remove zsys # broken, do not use
apt remove sddm # login manager
apt remove avahi-daemon avahi-autoipd # not sure what it does, observed using 100% CPU
apt remove modemmanager # probes all serial ports to see if it's a modem
</pre>
</pre>
* systemctl daemon-reload
* systemctl enable rc-local
* systemctl start rc-local
* systemctl status rc-local


= Disable unwanted services =
= Disable unwanted services =
Line 593: Line 978:
systemctl disable snapd
systemctl disable snapd
systemctl disable ModemManager
systemctl disable ModemManager
systemctl --global mask tracker-extract-3.service
systemctl --global mask tracker-miner-fs-3.service
systemctl daemon-reload
</pre>
</pre>


= Disable sleep and suspend =
= Disable sleep and suspend =
note: we see some computers randomly shutdown or go to sleep, log files indicates the "sleep" or "suspend" button was pushed by user, but no such buttons actually exist. this is the fix for this:


<pre>
<pre>
Line 633: Line 1,023:
* execute these commands:
* execute these commands:
<pre>
<pre>
apt install apache2
apt -y install apache2
cd /etc/apache2
cd /etc/apache2
</pre>
</pre>
Line 712: Line 1,102:


(Note: as of 2019-01-?? certbot requires use of port 80 for renewals)
(Note: as of 2019-01-?? certbot requires use of port 80 for renewals)
(Note: unsurprisingly, this requires outside access to connect with letsencrypt, so won't work if PC is only accessible from on-site network)


* check that port 80 is not used by anything:
* check that port 80 is not used by anything:
Line 734: Line 1,126:
* then answer questions:
* then answer questions:
* "choose redirect..." - say "1" (no redirect)
* "choose redirect..." - say "1" (no redirect)
* look inside /etc/apache2/sites-enabled/ssl-daq14.conf to see that SSLCertificateFile & co point to certbot certificates in
* look inside /etc/apache2/sites-enabled/daq14-ssl.conf to see that SSLCertificateFile & co point to certbot certificates in
/etc/letsencrypt/live/daq14.triumf.ca/
/etc/letsencrypt/live/daq14.triumf.ca/
* to check current renewal and to update the certbot config file in /etc/letsencrypt/renewal, run this:
* to check current renewal and to update the certbot config file in /etc/letsencrypt/renewal, run this:
Line 767: Line 1,159:
</pre>
</pre>


From here:
* enable proxy for MIDAS mhttpd - uncomment redirect in the config file above
* enable proxy for ELOG - ditto
<pre>
a2enmod proxy
a2enmod proxy_http
apache2ctl configtest
systemctl restart apache2
</pre>
* try accessing MIDAS https://daq14.triumf.ca/ (make sure mhttpd is running)
* try accessing MIDAS https://daq14.triumf.ca/ (make sure mhttpd is running)
* if it's not working, check odb setting FIXME!
* if it's not working, check odb setting FIXME!
Line 786: Line 1,169:
NOTE: if certbot fails with errors about 'module' object has no attribute 'pyopenssl',
NOTE: if certbot fails with errors about 'module' object has no attribute 'pyopenssl',
try this: pip install requests==2.6.0
try this: pip install requests==2.6.0
= Enable elog PDF preview =
see https://stackoverflow.com/questions/52998331/imagemagick-security-policy-pdf-blocking-conversion
* xemacs -nw /etc/ImageMagick-6/policy.xml
* remove this section at the end:
<pre>
<!-- disable ghostscript format types -->
<policy domain="coder" rights="none" pattern="PS" />
<policy domain="coder" rights="none" pattern="PS2" />
<policy domain="coder" rights="none" pattern="PS3" />
<policy domain="coder" rights="none" pattern="EPS" />
<policy domain="coder" rights="none" pattern="PDF" />
<policy domain="coder" rights="none" pattern="XPS" />
</pre>
= Install Jupyter notebook =
<pre>
From https://jupyter.org/install
apt install python3-pip
pip install jupyterlab
pip install notebook
~/.local/bin/jupyter notebook
watch the http://localhost:8888 URL that it printed
say "no" to offer to start firefox (it will not work!)
URL is: http://localhost:8888/tree?token=xxx
from the machine where you are running the web browser (i.e. google-chrome), run (replace trinat@trinatdaq with the username and machine name where you started jupyter)
open a new shell and run: ssh -v trinat@trinatdaq -L 8888:localhost:8888
in the web browser, open http://localhost:8888
this gives us the login page
in the password or token entry field, put the token from the "tree?token=xxx" above (printed by jupyter on startup)
push button "login"
jupyter page should open with the list of files in the trinat home directory
congratulate Brian with full success
</pre>
= Install ZFS quota report =
If there are any ZFS volumes, install script to report disk and quota usage
<pre>
cd ~/git/scripts/quotareport
git pull
mkdir /var/www/html/zfsquotareport
cp -pv ~/git/scripts/quotareport/sorttable.js /var/www/html/zfsquotareport/
ln -s $PWD/zfsquotareport.perl /etc/cron.daily/
touch /etc/crontab
</pre>
If httpd is configured to redirect "/" to MIDAS mhttpd:
* add following to /etc/apache2/sites-enabled/xxx-ssl.conf in front of "ProxyPass / ..."
* run "systemctl reload apache2"
<pre>
## do not proxy zfs quota report directory
ProxyPass /zfsquotareport/ !
</pre>


= Install PHP =
= Install PHP =
Line 799: Line 1,240:
* open https://daq00.triumf.ca/info.php
* open https://daq00.triumf.ca/info.php


= Configure GRUB boot loader =
= Configure TRIUMF printers =


This will enable the grub menu (with a 10 sec timeout) and
<pre>
replace black screen with exciting linux boot messages.
systemctl stop cups
systemctl disable cups
echo "ServerName printers.triumf.ca" > /etc/cups/client.conf
lpstat -a
</pre>
 
= Enable core dumps =
 
By default, Ubuntu LTS 20.04 installs the apport package
which disabled core dumps from user applications. (google it up!).
It is not meant to do this and documentation claims that
it is not installed and not enabled by default. Oh, well...
 
<pre>
apt remove apport
apt autoremove ### will remove apport-symptoms and a few other packages
</pre>
 
After this, core dumps are written to file "core" in the current directory.
See /proc/sys/kernel/core_pattern and /proc/sys/kernel/core_uses_pid.
 
Enable core dump file names to include process id, add following to /etc/rc.local
 
<pre>
echo 1 > /proc/sys/kernel/core_uses_pid
</pre>
 
= Enable debugger =
 
By default, Ubuntu LTS 20.04 does not permit debugger to attach and debug
already running programs. To enable it, add following to /etc/rc.local


* emacs -nw /etc/default/grub
<pre>
<pre>
GRUB_DEFAULT=0
echo 0 > /proc/sys/kernel/yama/ptrace_scope
#GRUB_TIMEOUT_STYLE=hidden
GRUB_TIMEOUT=10
GRUB_DISTRIBUTOR=`lsb_release -i -s 2> /dev/null || echo Debian`
#GRUB_CMDLINE_LINUX_DEFAULT="vga=769 video=640x480"
GRUB_CMDLINE_LINUX=""
#GRUB_GFXMODE=640x480
</pre>
</pre>
* update grub config:
 
= Disable Ubuntu Pro nag =
 
If "apt upgrade" requests Ubuntu Pro or esm-apps, disable the nag:
<pre>
<pre>
grub-mkconfig -o /boot/grub/grub.cfg
/bin/rm /etc/apt/apt.conf.d/20apt-esm-hook.conf
</pre>
</pre>


Line 826: Line 1,293:


= Finish installation =
= Finish installation =
Congratulations. There is nothing more to do!


* reboot
* reboot
Line 849: Line 1,318:
</pre>
</pre>


= Ubuntu package manager =
Update Ubuntu LTS 20.04 to LTS 22.04:


* apt-get install xxx # install package xxx
<pre>
* apt-get update
apt remove zsys
* apt-get upgrade
</pre>
* apt-get dist-upgrade
 
* apt-get autoremove # remove automatically installed packages required by a removed package
== daqubuntu ==
* apt-get remove xxx # remove package xxx
* apt-cache search . # list all available packages
* apt-cache show "." | grep ^Package # list al available packages
* apt-cache madison root-system # show all available versions of package root-system
* apt list # list all installed packages
* dpkg --listfiles libpng16-16 # list all files from this package
* apt list --installed # list all installed packages
* dpkg -S /bin/bash # what package provides this file?
* dpkg -L bash # what files provided by this package?


= Ubuntu boot loader =
<pre>
# reboot to clear out all updates
# vi /etc/update-manager/release-upgrades # set "Prompt=normal"
# do-release-upgrade -c
Checking for a new Ubuntu release
New release '22.04 LTS' available.
Run 'do-release-upgrade' to upgrade to it.
# do-release-upgrade
...
say yes...
...
login.defs, say "Y" (erase local changes, use packaged version)
/etc/systemd/resolved.conf, say "Y" (same as above)
firefox snap, say yes
unable to reach snap store, say "skip"
/etc/gmond.conf, say "Y"
/var/yp/Makefile, say "install the package maintainer's version"
/etc/ypserv.conf, same thing
/etc/ypserv.securenets, same thing
/etc/default/nis, same thing
/etc/speech-dispatcher/modules/mary-generic.conf, same thing
/etc/apt/apt.conf.d/50unattended-upgrades, same thing
...
278 packages are going to be removed, say yes
...
restart required, say yes
...
no ping... yes ping...
...
ssh daqubuntu, ok
apt update, fail, DNS does not work, "host security.ubuntu.com" does not resolve.
fix resolver per https://daq00.triumf.ca/DaqWiki/index.php/Ubuntu#Disable_NetworkManager
apt update, apt upgrade now works, 0 packages to update
NIS does not work.
</pre>


== boot from ZFS ==
== midm9a ==


* use UEFI boot with syslinux, see here: https://daq.triumf.ca/DaqWiki/index.php/SLinstall#Configure_UEFI_boot
* apt install zfs-initramfs
* update-initramfs -v -u
* ZFS structure:
<pre>
<pre>
root@daq00:~# zfs list
login.defs
NAME                                              USED  AVAIL    REFER  MOUNTPOINT
firefox snap
rpool                                              147G  1.62T      96K  /
gmond.conf
rpool/ROOT                                        17.8G  1.62T      96K  none
ypserv
rpool/ROOT/ubuntu_00aaaa                          17.8G  1.62T    6.22G  /
/etc/default/nis
unattended-upgrades
amanda-security.conf
remove obsolete (no)
reboot
configure dns
reenable nis
</pre>
 
== daq17 ==
 
<pre>
firefox snap
imagemagick policy.xml
gmond.conf
chrony.conf
/var/yp/Makefile
ypserv.conf
ypserv.securenets
/etc/default/nis
50unattended-upgrades
</pre>
</pre>
* copy OS image to rpool/ROOT/ubuntu_00aaaa
 
* zfs set mountpoint=/ rpool
== daq00 ==
* zfs set mountpoint=none rpool/ROOT
 
* zfs set mountpoint=/ rpool/ROOT/ubuntu_00aaaa
per https://serverpilot.io/docs/how-to-upgrade-ubuntu-20.04-to-22.04/
* zfs get all | grep mountpoint
 
<pre>
<pre>
rpool                    mountpoint            /                      local
do-release-upgrade -f DistUpgradeViewNonInteractive
rpool/ROOT                mountpoint            none                  local
rpool/ROOT/ubuntu_00aaaa  mountpoint            /                      local
</pre>
</pre>
* in linux kernel command line (syslinux.cfg), set "root=" to "root=ZFS=rpool/ROOT/ubuntu_00aaaa"


== boot from ZFS mirror ==
if it exists "too soon" without doing anything, run it without "-f xxx", most likely it does not like something about this machine. in case of daq00 it did not like how the EFI partitions were mounted. after fixing it, non-interactive upgrade was successful.


=== setup the EFI partitions ===
== isdaq08 ==


* assuming /dev/sdb is already setup for EFI boot, setup /dev/sda the same way:
* prepare
* partition the second boot disk same as first boot disk:
<pre>
<pre>
root@grsnis01:~# gdisk -l /dev/sdb
cd ~/git/scripts
Found valid GPT with protective MBR; using GPT.
git pull
Number  Start (sector)    End (sector)  Size      Code  Name
cd ~
  1            2048        1050623  512.0 MiB  EF00  EFI system partition
apt -y install debsums
  2        1050624      3907029134  1.8 TiB    8300  Linux filesystem
root@grsnis01:~#
</pre>
</pre>
* mkfs.msdos /dev/sdX1
* check for modified config files that make upgrade unhappy, deal with all files reported by debsums.
* create mount points
<pre>
<pre>
mkdir /boot/efi-sda
root@isdaq08:~# debsums -ce
mkdir /boot/efi-sdb
/etc/ganglia/gmond.conf
/etc/yp.conf
/etc/apt/apt.conf.d/10periodic
root@isdaq08:~#
</pre>
</pre>
* add to /etc/fstab
* restore original /etc/apt/apt.conf.d/10periodic
<pre>
<pre>
/dev/sda1 /boot/efi-sda      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0      1  
APT::Periodic::Update-Package-Lists "1";
/dev/sdb1 /boot/efi-sdb      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0       1
APT::Periodic::Download-Upgradeable-Packages "0";
APT::Periodic::AutocleanInterval "0";
</pre>
</pre>
* mount -a
* apt remove ganglia-monitor
* df | grep boot
* apt remove nis
* "debsums -ce" is now empty
 
Run the upgrade:
 
* do-release-upgrade -f DistUpgradeViewNonInteractive
 
Post upgrade:
 
* configure DNS
* apt -y install linux-generic-hwe-22.04
* /bin/cp -v ~/git/scripts/etc/99apt-conf-ko /etc/apt/apt.conf.d/ # restore nightly updates
* /bin/rm /etc/apt/apt.conf.d/20apt-esm-hook.conf # remove the ubuntu-pro nag
* install missing packages
* restore ganglia
* restore nis
* check zpool status, may need zpool upgrade
* reboot
 
= Upgrade to new version of Debian =
 
https://www.debian.org/releases/bookworm/amd64/release-notes/ch-upgrading.en.html
 
== 32-bit VME processor Debian 11 to 12 ==
 
* cd git/scripts; git pull; cd ~
* apt update
* apt upgrade
* edit /etc/apt/sources.list
<pre>
<pre>
root@grsnis01:~# df | grep boot
deb http://deb.debian.org/debian/ bookworm main
/dev/sdb1                    523248    98100    425148  19% /boot/efi-sdb
#deb http://deb.debian.org/debian/ bullseye main
/dev/sda1                    523248        4    523244  1% /boot/efi-sda
#deb-src http://deb.debian.org/debian/ bullseye main
</pre>
</pre>
* copy boot files to new boot disk
* apt update
* cd /boot/efi-sdX; rsync -av . /boot/efi-sdY
* apt upgrade --without-new-pkgs
* set BIOS to boot from "UEFI Hard drive", disable legacy boot (except for booting from USB key in legacy mode)
* apt full-upgrade
* if using UEFI boot syslinux per these instructions, linux kernel update has to be done manually by running the script update_efi_mirror.perl (provided by K.O.), follow instructions that it prints.
* apt list '~c'; apt purge '~c' # purge left-over config files [residual-config]
* reboot


=== zetup zfs mirror ===
= Ubuntu package manager =


* see here: https://daq.triumf.ca/DaqWiki/index.php/ZFS#Convert_pool_from_single_to_mirror
* apt-get install xxx # install package xxx
<pre>
* apt-get update
root@grsnis01:~# ls -l /dev/disk/by-id/ata*part2
* apt-get upgrade
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2 -> ../../sda2
* apt-get dist-upgrade
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 -> ../../sdb2
* apt-get autoremove # remove automatically installed packages required by a removed package
* apt-get remove xxx # remove package xxx
* apt-cache search . # list all available packages
* apt-cache show "." | grep ^Package # list al available packages
* apt-cache madison root-system # show all available versions of package root-system
* apt list # list all installed packages
* dpkg --listfiles libpng16-16 # list all files from this package
* apt list --installed # list all installed packages
* dpkg -S /bin/bash # what package provides this file?
* dpkg -L bash # what files provided by this package?
* debsums -ce # show modified config files
* apt-config dump # show apt configuration


root@grsnis01:~# zpool status
= Ubuntu zsys =
  pool: rpool
state: ONLINE
  scan: none requested
config:


        NAME                                            STATE    READ WRITE CKSUM
NOTE: DO NOT USE ZSYS, see https://github.com/ubuntu/zsys/issues/218 and https://github.com/ubuntu/zsys/issues/230
        rpool                                            ONLINE      0    0    0
          ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0


errors: No known data errors
* manual removal of old snapshots
<pre>
zsysctl show
zsysctl state remove xy69ye -s
zsysctl state remove xy69ye
zsysctl state remove xy69ye -u wheel
</pre>
* apt remove zsys


root@grsnis01:~# zpool attach rpool ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2
NOTE: old zsys snapshots must be cleaned manually, "zsysctl state remove xxx --system" is broken and does not remove user data snapshots


root@grsnis01:~# zpool status
* manages system snapshots
  pool: rpool
* documentation: https://github.com/ubuntu/zsys
state: ONLINE
* documentation: (go to next article via link "newer" at the bottom) https://didrocks.fr/2020/05/21/zfs-focus-on-ubuntu-20.04-lts-whats-new/
status: One or more devices is currently being resilvered. The pool will
* ubuntu 20.04 bug, too many snapshots cause /boot to become full and updates fail. https://github.com/ubuntu/zsys/issues/155
        continue to function, possibly in a degraded state.
* solution: use custom /etc/zsys.conf, limit number of snapshots to 10, see trinatdaq:/etc/zsys.conf
action: Wait for the resilver to complete.
* zsys commands:
  scan: resilver in progress since Fri Feb 19 16:54:39 2021
<pre>
        12.6G scanned at 3.16G/s, 1.02G issued at 262M/s, 12.6G total
update-grub # list of all snapshots, errors if some snapshots are broken
        1.02G resilvered, 8.09% done, 0 days 00:00:45 to go
zsysctl state remove lnc0k7 --system # remove snapshot
config:
xemacs -nw /etc/zsys.conf; zsysctl service reload; zsysctl service gc # cause gc to run with new settings in zsys.conf
zfs list -r -t snapshot -o name,used,referenced,creation bpool/BOOT # list snapshots
zsysctl show # show snapshots
</pre>
 
= Ubuntu cloning =


        NAME                                              STATE    READ WRITE CKSUM
to clone a ubuntu image:
        rpool                                              ONLINE      0    0    0
          mirror-0                                        ONLINE      0    0    0
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE      0    0    0  (resilvering)


errors: No known data errors
<pre>
cd /nfsroot/lxcpet
emacs -nw etc/hostname ### change hostname
emacs -nw etc/mailname ### change hostname (debian 11)
emacs -nw etc/defaultdomain ### change the NIS domainname
emacs -nw etc/yp.conf ### change the NIS server
cp -pvf ../lxcpet-SL610/etc/ssh/*key* etc/ssh/ ### preserve the ssh keys
emacs -nw opt/gonodeinfo/gonodeinfo.conf ### update information
emacs -nw root/.ssh/authorized_keys ### update root ssh keys
</pre>
</pre>
* wait
<pre>
root@grsnis01:~# zpool status
  pool: rpool
state: ONLINE
  scan: resilvered 12.7G in 0 days 00:00:40 with 0 errors on Fri Feb 19 16:55:19 2021
config:


        NAME                                              STATE    READ WRITE CKSUM
= Ubuntu boot loader =
        rpool                                              ONLINE      0    0    0
 
          mirror-0                                        ONLINE      0    0    0
== boot from ZFS ==
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE      0    0    0


errors: No known data errors
* use UEFI boot with syslinux, see here: https://daq.triumf.ca/DaqWiki/index.php/SLinstall#Configure_UEFI_boot
* apt install zfs-initramfs
* update-initramfs -v -u
* ZFS structure:
<pre>
root@daq00:~# zfs list
NAME                                              USED  AVAIL    REFER  MOUNTPOINT
rpool                                              147G  1.62T      96K  /
rpool/ROOT                                        17.8G  1.62T      96K  none
rpool/ROOT/ubuntu_00aaaa                          17.8G  1.62T    6.22G  /
</pre>
* copy OS image to rpool/ROOT/ubuntu_00aaaa
* zfs set mountpoint=/ rpool
* zfs set mountpoint=none rpool/ROOT
* zfs set mountpoint=/ rpool/ROOT/ubuntu_00aaaa
* zfs get all | grep mountpoint
<pre>
rpool                    mountpoint            /                      local
rpool/ROOT                mountpoint            none                  local
rpool/ROOT/ubuntu_00aaaa  mountpoint            /                      local
</pre>
</pre>
* in linux kernel command line (syslinux.cfg), set "root=" to "root=ZFS=rpool/ROOT/ubuntu_00aaaa"


== maintenance commands ==
== boot from ZFS mirror ==


* update-initramfs -v -u
=== setup the EFI partitions ===
* grub-install /dev/sda


= Disable NetworkManager =
* assuming /dev/sdb is already setup for EFI boot, setup /dev/sda the same way:
 
* partition the second boot disk same as first boot disk:
NetworkManager is useful for configuring dynamic
network interfaces, i.e. laptops that often move
between networks, or connect to multiple choice
of wifi networks, etc.
 
For machines with statically configured network interfaces,
NetworkManager is not necessary.
 
As it has been observed to become confused and observed
to malfunction when network links go up and down (it keeps
unnecessarily reconfiguring the ip address, etc), it can
be usefuil to disable it.
 
* list all network interfaces
<pre>
<pre>
# /bin/ls -1 /sys/class/net/
root@grsnis01:~# gdisk -l /dev/sdb
enp0s31f6
Found valid GPT with protective MBR; using GPT.
lo
Number  Start (sector)    End (sector)  Size      Code  Name
</pre>
  1           2048        1050623  512.0 MiB  EF00  EFI system partition
* edit /etc/network/interfaces:
  2        1050624      3907029134  1.8 TiB    8300  Linux filesystem
root@grsnis01:~#
</pre>
* mkfs.msdos /dev/sdX1
* create mount points
<pre>
<pre>
rename enp0s31f6=eth0
mkdir /boot/efi-sda
auto eth0
mkdir /boot/efi-sdb
iface eth0 inet static
  address 142.90.120.94/22
  gateway 142.90.100.18
</pre>
</pre>
* statically configure systemd-resolved
* add to /etc/fstab
<pre>
<pre>
xemacs -nw /etc/systemd/resolved.conf ### to read this:
/dev/sda1 /boot/efi-sda      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0      1
XXX
/dev/sdb1 /boot/efi-sdb      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0      1
[Resolve]
DNS=142.90.100.19
Domains=triumf.ca
XXX
systemctl restart systemd-resolved
resolvectl
</pre>
</pre>
* disable NetworkManager
* mount -a
* df | grep boot
<pre>
<pre>
systemctl disable NetworkManager
root@grsnis01:~# df | grep boot
/dev/sdb1                    523248    98100    425148  19% /boot/efi-sdb
/dev/sda1                    523248        4    523244  1% /boot/efi-sda
</pre>
</pre>
* reboot
* copy boot files to new boot disk
* cd /boot/efi-sdX; rsync -av . /boot/efi-sdY
* set BIOS to boot from "UEFI Hard drive", disable legacy boot (except for booting from USB key in legacy mode)
* if using UEFI boot syslinux per these instructions, linux kernel update has to be done manually:
* run ~/git/scripts/etc/update_efi_mirror.perl, follow instructions that it prints.


= Configure ECC memory =
=== setup zfs partitions ===


== Configure EDAC ==
use partitions compatible with Ubuntu "install on ZFS"


* apt install edac-utils
* gdisk "o" to create new GPT partition table
* gdisk "n" +512M ef00 to create EFI partition
* gdisk "n" +2G 8200 to create linux swap partition (not used)
* gdisk "n" +2G BE00 to create ZFS bpool partition
* gdisk "n" xxx BF00 create ZFS rpool partition


=== Intel E-2236 ===
<pre>
<pre>
root@daq00:~# edac-ctl --mainboard
# gdisk -l /dev/sda
edac-ctl: mainboard: Supermicro X11SCM-F
Number  Start (sector)    End (sector)  Size      Code  Name
root@daq00:~# edac-ctl --status
  1            2048        1050623  512.0 MiB  EF00  EFI System Partition
edac-ctl: drivers are loaded.
  2        1050624        5244927  2.0 GiB    8200 
root@daq00:~# edac-util
  3        5244928        9439231  2.0 GiB    BE00 
edac-util: No errors to report.
  4        9439232      234441614  107.3 GiB  BF00 
root@daq00:~# edac-util -s
root@midm9a:~#  
edac-util: EDAC drivers are loaded. 1 MC detected
</pre>
</pre>
* check edac sysfs files (Intel)
 
=== setup zfs mirror ===
 
* see here: https://daq.triumf.ca/DaqWiki/index.php/ZFS#Convert_pool_from_single_to_mirror
<pre>
<pre>
root@daq00:~# ls -l /sys/devices/system/edac/mc/mc0
root@grsnis01:~# ls -l /dev/disk/by-id/ata*part2
total 0
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2 -> ../../sda2
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_count
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 -> ../../sdb2
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_noinfo_count
 
-r--r--r-- 1 root root 4096 Jan 25 15:10 max_location
root@grsnis01:~# zpool status
-r--r--r-- 1 root root 4096 Jan 25 15:10 mc_name
  pool: rpool
drwxr-xr-x 2 root root    0 Jan 25 15:10 power
state: ONLINE
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank0
  scan: none requested
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank1
config:
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank2
 
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank3
        NAME                                            STATE    READ WRITE CKSUM
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank4
        rpool                                            ONLINE      0    0    0
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank5
          ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank6
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank7
--w------- 1 root root 4096 Jan 25 15:10 reset_counters
-r--r--r-- 1 root root 4096 Jan 25 15:10 seconds_since_reset
-r--r--r-- 1 root root 4096 Jan 25 15:10 size_mb
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_count
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Jan 25 15:10 uevent
root@daq00:~#
</pre>


=== Intel E3-1270 v6 ===
errors: No known data errors
<pre>
 
root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --mainboard
root@grsnis01:~# zpool attach rpool ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2
edac-ctl: mainboard: Supermicro X11SSH-F
 
root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --status
root@grsnis01:~# zpool status
edac-ctl: drivers are loaded.
  pool: rpool
root@grsnis01:~# edac-util
state: ONLINE
edac-util: No errors to report.
status: One or more devices is currently being resilvered.  The pool will
root@grsnis01:~# edac-util -s
        continue to function, possibly in a degraded state.
edac-util: EDAC drivers are loaded. 1 MC detected
action: Wait for the resilver to complete.
root@grsnis01:~# ls -l /sys/devices/system/edac/mc/mc0
  scan: resilver in progress since Fri Feb 19 16:54:39 2021
total 0
        12.6G scanned at 3.16G/s, 1.02G issued at 262M/s, 12.6G total
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_count
        1.02G resilvered, 8.09% done, 0 days 00:00:45 to go
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_noinfo_count
config:
-r--r--r-- 1 root root 4096 Feb 19 12:35 max_location
 
-r--r--r-- 1 root root 4096 Feb 19 12:35 mc_name
        NAME                                              STATE    READ WRITE CKSUM
drwxr-xr-x 2 root root    0 Feb 19 12:35 power
        rpool                                              ONLINE      0     0     0
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank0
          mirror-0                                         ONLINE      0     0     0
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank1
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank2
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE      0    0    0  (resilvering)
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank3
 
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank4
errors: No known data errors
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank5
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank6
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank7
--w------- 1 root root 4096 Feb 19 12:35 reset_counters
-r--r--r-- 1 root root 4096 Feb 19 12:35 seconds_since_reset
-r--r--r-- 1 root root 4096 Feb 19 12:35 size_mb
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Feb 19 12:35 uevent
root@grsnis01:~#
</pre>
</pre>
 
* wait
=== AMD 3700X ===
 
(memory is non-ECC)
 
<pre>
<pre>
root@daq13:~# edac-ctl --mainboard
root@grsnis01:~# zpool status
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
  pool: rpool
root@daq13:~#
state: ONLINE
root@daq13:~#
  scan: resilvered 12.7G in 0 days 00:00:40 with 0 errors on Fri Feb 19 16:55:19 2021
root@daq13:~# edac-ctl --status
config:
edac-ctl: drivers not loaded.
 
root@daq13:~# edac-util
        NAME                                              STATE    READ WRITE CKSUM
edac-util: Error: No memory controller data found.
        rpool                                              ONLINE      0    0    0
root@daq13:~# edac-util -s
          mirror-0                                         ONLINE      0    0    0
edac-util: EDAC drivers loaded. No memory controllers found
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE      0    0    0
root@daq13:~# ls -l /sys/devices/system/edac/mc
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE      0    0    0
total 0
 
drwxr-xr-x 2 root root    0 Jan 25 15:26 power
errors: No known data errors
lrwxrwxrwx 1 root root    0 Jan 21 16:16 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 Jan 21 16:16 uevent
</pre>
</pre>


(memory is ECC)
== maintenance commands ==


* update-initramfs -v -u
* grub-install /dev/sda
= Convert from single to dual mirrored ZFS SSD =
Assuming Ubuntu LTS 22.04 with "instal on ZFS" option, we will
add a second SSD, configure ZFS to use both SSDs in mirrored
configuration and setup grub to boot from either SSD. This
is intended to create a full redundant system where failure
of either SSD does not break the system.
* identify first SSD
<pre>
root@midm9b:~# ./smart-status.perl
        Disk                    model              serial    temperature  realloc  pending  uncorr  CRC err    RRER Errors    Link
    /dev/sda  WD Blue SA510 2.5 250GB        22243Z803769              24        .        ?        ?        .        ?        .      6.0
root@midm9b:~#
</pre>
* connect second SSD of identical size
<pre>
<pre>
root@trinatdaq:~# edac-ctl --mainboard
root@midm9b:~# ./smart-status.perl
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
        Disk                    model              serial    temperature  realloc  pending  uncorr  CRC err    RRER  Errors    Link
root@trinatdaq:~# edac-ctl --status
    /dev/sda  WD Blue SA510 2.5 250GB        22243Z803769              24        .        ?        ?        .        ?        .      6.0
edac-ctl: drivers are loaded.
    /dev/sdb  WD Blue SA510 2.5 250GB        22243Z803852              25        .        ?        ?        .        ?        .      6.0
root@trinatdaq:~# edac-util
root@midm9b:~#  
edac-util: No errors to report.
</pre>
root@trinatdaq:~# edac-util -s
* if second SSD is not autodetected, reboot
edac-util: EDAC drivers are loaded. 1 MC detected
* Clone partition table automatically
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc
If both SSDs are identical size, use this simpler method of duplicating the partition table:
total 0
<pre>
drwxr-xr-x 7 root root    0 Dec 15 13:04 mc0
root@midm9b:~# sfdisk -d /dev/sda > part_table
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
root@midm9b:~# grep -v ^label-id part_table | sed -e 's/, *uuid=[0-9A-F-]*//' | sfdisk /dev/sdb
lrwxrwxrwx 1 root root    0 Dec 13 18:31 subsystem -> ../../../../bus/edac
</pre>
-rw-r--r-- 1 root root 4096 Dec 13 18:31 uevent
The grep and sed in the second command are there to prevent disk ID and partition IDs from being cloned. Alternatively the part_table file can be edited manually to remove the label-id line and the uuid entries from the individual partitions.
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc/mc0
 
total 0
* Clone partition table manually (e.g. for different size disks)
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_count
* list partition table of first SSD:
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_noinfo_count
<pre>
-r--r--r-- 1 root root 4096 Dec 15 13:04 max_location
root@midm9b:~# fdisk -l /dev/sda
-r--r--r-- 1 root root 4096 Dec 15 13:04 mc_name
Disk /dev/sda: 232.89 GiB, 250059350016 bytes, 488397168 sectors
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
Disk model: WD Blue SA510 2.
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank4
Units: sectors of 1 * 512 = 512 bytes
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank5
Sector size (logical/physical): 512 bytes / 512 bytes
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank6
I/O size (minimum/optimal): 512 bytes / 512 bytes
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank7
Disklabel type: gpt
--w------- 1 root root 4096 Dec 15 13:04 reset_counters
Disk identifier: 951A4174-B4C6-400D-99F5-BE9B5627FA8E
-rw-r--r-- 1 root root 4096 Dec 15 13:04 sdram_scrub_rate
 
-r--r--r-- 1 root root 4096 Dec 15 13:04 seconds_since_reset
Device      Start      End  Sectors  Size Type
-r--r--r-- 1 root root 4096 Dec 15 13:04 size_mb
/dev/sda1    2048  1050623  1048576  512M EFI System
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_count
/dev/sda2  1050624  5244927  4194304    2G Linux swap
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_noinfo_count
/dev/sda3  5244928  9439231  4194304    2G Solaris boot
-rw-r--r-- 1 root root 4096 Dec 15 13:04 uevent
/dev/sda4  9439232 488397134 478957903 228.4G Solaris root
root@trinatdaq:~#
root@midm9b:~#
</pre>
</pre>
* create identical partitions on second SSD, use sector numbers from above.
<pre>
root@midm9b:~# gdisk /dev/sdb
GPT fdisk (gdisk) version 1.0.8
 
Partition table scan:
  MBR: not present
  BSD: not present
  APM: not present
  GPT: not present
 
Creating new GPT entries in memory.
 
Command (? for help): n
Partition number (1-128, default 1):  
First sector (34-488397134, default = 2048) or {+-}size{KMGTP}:  
Last sector (2048-488397134, default = 488397134) or {+-}size{KMGTP}: 1050623
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): ef00
Changed type of partition to 'EFI system partition'


=== AMD 5000G ===
Command (? for help): n
Partition number (2-128, default 2):
First sector (34-488397134, default = 1050624) or {+-}size{KMGTP}:
Last sector (1050624-488397134, default = 488397134) or {+-}size{KMGTP}: 5244927
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): 8200
Changed type of partition to 'Linux swap'


* no linux driver for AMD 5000-series "G" CPU
Command (? for help): n
* no mention of ECC in the BIOS settings
Partition number (3-128, default 3):
* unclear status of ECC support in AMD documentation (sais only "pro" "G" CPUs have ECC)
First sector (34-488397134, default = 5244928) or {+-}size{KMGTP}:
* unclear status of ECC support in ASUS documentation (web page out of date)
Last sector (5244928-488397134, default = 488397134) or {+-}size{KMGTP}: 9439231
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): be00
Changed type of partition to 'Solaris boot'


== Configure rasdaemon ==
Command (? for help): n
Partition number (4-128, default 4):
First sector (34-488397134, default = 9439232) or {+-}size{KMGTP}:
Last sector (9439232-488397134, default = 488397134) or {+-}size{KMGTP}:
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): bf00
Changed type of partition to 'Solaris root'


* apt install rasdaemon
Command (? for help): w
* systemctl enable rasdaemon
 
* systemctl start rasdaemon
Final checks complete. About to write GPT data. THIS WILL OVERWRITE EXISTING
* systemctl status rasdaemon
PARTITIONS!!
<pre>
 
● rasdaemon.service - RAS daemon to log the RAS events
Do you want to proceed? (Y/N): y
    Loaded: loaded (/lib/systemd/system/rasdaemon.service; enabled; vendor preset: enabled)
OK; writing new GUID partition table (GPT) to /dev/sdb.
    Active: active (running) since Mon 2021-01-25 15:16:37 PST; 3min 5s ago
The operation has completed successfully.
  Main PID: 2477175 (rasdaemon)
root@midm9b:~# fdisk -l /dev/sda /dev/sdb
      Tasks: 1 (limit: 76958)
Disk /dev/sda: 232.89 GiB, 250059350016 bytes, 488397168 sectors
    Memory: 17.1M
Disk model: WD Blue SA510 2.
    CGroup: /system.slice/rasdaemon.service
Units: sectors of 1 * 512 = 512 bytes
            └─2477175 /usr/sbin/rasdaemon -f -r
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: 951A4174-B4C6-400D-99F5-BE9B5627FA8E
 
Device      Start      End  Sectors  Size Type
/dev/sda1    2048  1050623  1048576  512M EFI System
/dev/sda2  1050624  5244927  4194304    2G Linux swap
/dev/sda3  5244928  9439231  4194304    2G Solaris boot
/dev/sda4  9439232 488397134 478957903 228.4G Solaris root


Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: ras:extlog_mem_event event enabled
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Enabled event ras:extlog_mem_event
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: ras:extlog_mem_event event enabled
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Listening to events for cpus 0 to 11
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: Enabled event ras:extlog_mem_event
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mc_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording aer_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording extlog_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mce_record events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording arm_event events
</pre>


== Get reports ==
Disk /dev/sdb: 232.89 GiB, 250059350016 bytes, 488397168 sectors
Disk model: WD Blue SA510 2.
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: EB251739-30C6-422F-A505-5887B5A0B603


* Intel 2x32GB ECC DIMMs
Device      Start      End  Sectors  Size Type
/dev/sdb1    2048  1050623  1048576  512M EFI System
/dev/sdb2  1050624  5244927  4194304    2G Linux swap
/dev/sdb3  5244928  9439231  4194304    2G Solaris boot
/dev/sdb4  9439232 488397134 478957903 228.4G Solaris root
root@midm9b:~#
</pre>
* identify second SSD partitions
<pre>
root@midm9b:~# ls -l /dev/disk/by-id/ata*part3
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part3 -> ../../sda3
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3 -> ../../sdb3
root@midm9b:~# ls -l /dev/disk/by-id/ata*part4
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part4 -> ../../sda4
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4 -> ../../sdb4
</pre>
* convert bpool from single disk to mirrored disk:
<pre>
<pre>
root@daq00:~# ras-mc-ctl --layout
root@midm9b:~# zpool status
          +-------------------------+
   pool: bpool
          |          mc0          |
state: ONLINE
          |   csrow0  |  csrow1  |
config:
----------+-------------------------+
 
channel1: |  16384 MB  |  16384 MB  |
NAME                                    STATE    READ WRITE CKSUM
channel0: |  16384 MB  |  16384 MB  |
bpool                                  ONLINE       0     0     0
----------+-------------------------+
  99e03dc0-7d4d-f24b-8fa1-f042b9f135db  ONLINE       0     0     0
root@daq00:~# ras-mc-ctl --error-count
 
Label                  CE      UE
errors: No known data errors
mc#0csrow#1channel#1    0       0
mc#0csrow#1channel#0   0      0
mc#0csrow#0channel#0    0       0
mc#0csrow#0channel#1    0      0
root@daq00:~#
</pre>


* Intel 4x16GB ECC DIMMs
   pool: rpool
<pre>
  state: ONLINE
root@daq00:~# ras-mc-ctl --error-count
config:
Label                  CE      UE
mc#0csrow#0channel#1    0      0
mc#0csrow#2channel#0    0      0
mc#0csrow#0channel#0    0      0
mc#0csrow#2channel#1    0      0
mc#0csrow#1channel#0    0      0
mc#0csrow#1channel#1    0      0
mc#0csrow#3channel#0    0      0
mc#0csrow#3channel#1    0      0
root@daq00:~#
root@daq00:~# ras-mc-ctl --layout
          +-----------------------+
          |          mc0          |
          |  csrow0  |  csrow1   |
----------+-----------------------+
channel1: |  8192 MB  |  8192 MB  |
channel0: |  8192 MB  |  8192 MB |
----------+-----------------------+
root@daq00:~#
root@daq00:~#
root@daq00:~#
root@daq00:~# ras-mc-ctl --print-labels
ras-mc-ctl: Error: No dimm labels for Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --summary
No Memory errors.


No PCIe AER errors.
NAME                                    STATE    READ WRITE CKSUM
rpool                                  ONLINE      0    0    0
  f6fd54f8-3af7-b943-ae3d-a4e480537fb9  ONLINE      0    0    0


No Extlog errors.
errors: No known data errors
root@midm9b:~# zpool attach bpool 99e03dc0-7d4d-f24b-8fa1-f042b9f135db /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3
root@midm9b:~# zpool status bpool
  pool: bpool
state: ONLINE
  scan: resilvered 247M in 00:00:00 with 0 errors on Fri Jan 20 19:39:40 2023
config:


DBD::SQLite::db prepare failed: no such table: devlink_event at /usr/sbin/ras-mc-ctl line 1181.
NAME                                                STATE    READ WRITE CKSUM
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1182.
bpool                                              ONLINE      0    0    0
root@daq00:~#
  mirror-0                                          ONLINE      0    0    0
    99e03dc0-7d4d-f24b-8fa1-f042b9f135db            ONLINE      0    0    0
    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3  ONLINE      0    0    0
 
errors: No known data errors
</pre>
</pre>
* convert rpool
<pre>
root@midm9b:~# ls -l /dev/disk/by-id/ata*part4
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part4 -> ../../sda4
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4 -> ../../sdb4
root@midm9b:~# zpool attach rpool f6fd54f8-3af7-b943-ae3d-a4e480537fb9 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4
root@midm9b:~# zpool status rpool
  pool: rpool
state: ONLINE
status: One or more devices is currently being resilvered.  The pool will
continue to function, possibly in a degraded state.
action: Wait for the resilver to complete.
  scan: resilver in progress since Fri Jan 20 19:40:45 2023
5.83G scanned at 664M/s, 2.92M issued at 332K/s, 9.11G total
0B resilvered, 0.03% done, no estimated completion time
config:


= sensors =
NAME                                                STATE    READ WRITE CKSUM
rpool                                              ONLINE      0    0    0
  mirror-0                                          ONLINE      0    0    0
    f6fd54f8-3af7-b943-ae3d-a4e480537fb9            ONLINE      0    0    0
    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4  ONLINE      0    0    0
 
errors: No known data errors
root@midm9b:~#
</pre>
* wait for resilver to complete
<pre>
root@midm9b:~# zpool status
  pool: bpool
state: ONLINE
  scan: resilvered 247M in 00:00:00 with 0 errors on Fri Jan 20 19:39:40 2023
config:


== ASUS P9X79 WS ==
NAME                                                STATE    READ WRITE CKSUM
bpool                                              ONLINE      0    0    0
  mirror-0                                          ONLINE      0    0    0
    99e03dc0-7d4d-f24b-8fa1-f042b9f135db            ONLINE      0    0    0
    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3  ONLINE      0    0    0


* https://www.asus.com/supportonly/P9X79%20WS/HelpDesk_Manual/
errors: No known data errors
* BIOS version 4802
* modprobe nct6775
* modprobe coretemp


<pre>
  pool: rpool
root@daq14:~# sensors
state: ONLINE
coretemp-isa-0000
  scan: resilvered 9.65G in 00:00:36 with 0 errors on Fri Jan 20 19:41:21 2023
Adapter: ISA adapter
config:
Package id 0: +35.0°C  (high = +82.0°C, crit = +100.0°C)
 
Core 0:       +29.0°C  (high = +82.0°C, crit = +100.0°C)
NAME                                                STATE    READ WRITE CKSUM
Core 1:       +24.0°C  (high = +82.0°C, crit = +100.0°C)
rpool                                              ONLINE      0    0    0
Core 2:       +35.0°C (high = +82.0°C, crit = +100.0°C)
  mirror-0                                          ONLINE      0    0    0
Core 3:       +32.0°C (high = +82.0°C, crit = +100.0°C)
    f6fd54f8-3af7-b943-ae3d-a4e480537fb9            ONLINE      0    0    0
    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4  ONLINE      0    0    0
 
errors: No known data errors
</pre>
* enable booting from second SSD: (instead of /dev/sda1, /dev/sdb1, use UUID=xxx)
<pre>
root@midm9b:~# mkfs.msdos /dev/sdb1
root@midm9b:~# mkdir /boot/efi-sda
root@midm9b:~# mkdir /boot/efi-sdb
root@midm9b:~# echo "/dev/sda1 /boot/efi-sda      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0      1" >> /etc/fstab
root@midm9b:~# echo "/dev/sdb1 /boot/efi-sdb      vfat    umask=0022,fmask=0022,dmask=0022,nofail      0      1" >> /etc/fstab
root@midm9b:~# mount -a
root@midm9b:~# df -kl
Filesystem                                      1K-blocks    Used Available Use% Mounted on
...
/dev/sda1                                          523244  13720    509524  3% /boot/efi
/dev/sdb1                                          523244      4    523240  1% /boot/efi-sdb
...
root@midm9b:~# rsync -av /boot/efi/ /boot/efi-sdb/
sending incremental file list
EFI/
...
root@midm9b:~# ls -l /boot/efi-sda
total 8
drwxr-xr-x 4 root root 4096 Jan 19 23:26 EFI
drwxr-xr-x 5 root root 4096 Jan 19 23:26 grub
root@midm9b:~# ls -l /boot/efi-sdb
total 8
drwxr-xr-x 4 root root 4096 Jan 19 23:26 EFI
drwxr-xr-x 5 root root 4096 Jan 19 23:26 grub
root@midm9b:~#
</pre>
* setup script to update grub on second SSD, it must be run manually after every kernel update
<pre>
root@midm9b:~# ln -s ~/git/scripts/etc/update_efi_grub.perl ~/
root@midm9b:~# ~/update_efi_grub.perl -u
EFI dir: /boot/efi-sda
/boot/efi-sda: update grub: rsync -av --delete-after --modify-window=2 /boot/efi/grub/ /boot/efi-sda/grub
building file list ... done
 
sent 5,313 bytes  received 11 bytes  10,648.00 bytes/sec
total size is 7,944,644  speedup is 1,492.23
/boot/efi-sda: update efi:  rsync  -av --delete-after --modify-window=2 /boot/efi/EFI/  /boot/efi-sda/EFI
building file list ... done


nouveau-pci-0200
sent 216 bytes  received 11 bytes  454.00 bytes/sec
Adapter: PCI adapter
total size is 5,452,378 speedup is 24,019.29
GPU core:    900.00 mV (min = +0.85 V, max =  +1.00 V)
EFI dir: /boot/efi-sdb
temp1:       +39.0°C (high = +95.0°C, hyst =  +3.0°C)
/boot/efi-sdb: update grub: rsync -av --delete-after --modify-window=2 /boot/efi/grub/ /boot/efi-sdb/grub
                      (crit = +105.0°C, hyst =  +5.0°C)
building file list ... done
                      (emerg = +135.0°C, hyst =  +5.0°C)


nct6776-isa-0290
sent 5,313 bytes received 11 bytes 10,648.00 bytes/sec
Adapter: ISA adapter
total size is 7,944,644 speedup is 1,492.23
Vcore:          1.04 V  (min =  +0.00 V, max = +1.74 V)
/boot/efi-sdb: update efi:  rsync -av --delete-after --modify-window=2 /boot/efi/EFI/ /boot/efi-sdb/EFI
in1:            1.01 V (min =  +0.00 V, max =  +0.00 V)  ALARM
building file list ... done
AVCC:            3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
+3.3V:          3.33 V  (min =  +0.00 V, max = +0.00 V)  ALARM
in4:            1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:             2.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:           904.00 mV (min = +0.00 V, max = +0.00 V)  ALARM
3VSB:            3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
Vbat:            3.30 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:          1265 RPM  (min =    0 RPM)
fan2:          1909 RPM  (min =    0 RPM)
fan3:            0 RPM  (min =    0 RPM)
fan4:            0 RPM  (min =    0 RPM)
fan5:            0 RPM  (min =    0 RPM)
SYSTIN:        +34.0°C  (high =  +0.0°C, hyst =  +0.0°C)  ALARM  sensor = thermistor
CPUTIN:        +58.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermal diode
AUXTIN:        +31.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
PECI Agent 0:  +31.0°C  (high = +80.0°C, hyst = +75.0°C)
                        (crit = +96.0°C)
PCH_CHIP_TEMP:  +0.0°C 
PCH_CPU_TEMP:    +0.0°C 
PCH_MCH_TEMP:    +0.0°C 
intrusion0:    ALARM
intrusion1:    ALARM
beep_enable:  disabled


root@daq14:~#  
sent 216 bytes  received 11 bytes  454.00 bytes/sec
total size is 5,452,378  speedup is 24,019.29
root@midm9b:~#  
</pre>
</pre>


= Enable CPU turbo mode =
= Disable NetworkManager =
 
NOTE: THIS IS BROKEN IN UBUNTU LTS 22.04


* Intel CPU has a nominal CPU frequency (i.e. 3.4GHz) and a turbo-boost CPU frequency (i.e. 4.0GHz). Here we will enable this turbo-boost mode.
NetworkManager is useful for configuring dynamic
* Find out CPU capability
network interfaces, i.e. laptops that often move
<pre>
between networks, or connect to multiple choice
root@daq01:~# lscpu | grep Hz
of wifi networks, etc.
Model name:                      Intel(R) Core(TM) i7-6700 CPU @ 3.40GHz
 
CPU MHz:                        3965.803
For machines with statically configured network interfaces,
CPU max MHz:                    4000.0000
NetworkManager is not necessary.
CPU min MHz:                    800.0000
 
root@daq01:~#
As it has been observed to become confused and observed
to malfunction when network links go up and down (it keeps
unnecessarily reconfiguring the ip address, etc), it can
be usefuil to disable it.
 
* list all network interfaces
<pre>
# /bin/ls -1 /sys/class/net/
enp0s31f6
lo
</pre>
</pre>
* Look up this CPU in the Intel ARK database - google for the CPU model name, i.e.
* edit /etc/network/interfaces:
https://ark.intel.com/content/www/us/en/ark/products/88196/intel-core-i7-6700-processor-8m-cache-up-to-4-00-ghz.html
* Find current frequency settings:
<pre>
<pre>
root@daq01:~# cpupower frequency-info
rename enp0s31f6=eth0
analyzing CPU 0:
auto eth0
  driver: intel_pstate
iface eth0 inet static
  CPUs which run at the same hardware frequency: 0
  address 142.90.120.94/19
  CPUs which need to have their frequency coordinated by software: 0
  gateway 142.90.100.18
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "powersave" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 2.72 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
root@daq01:~#
</pre>
</pre>
* Note the following:
* statically configure systemd-resolved
** current governor is "powersave"
** create /etc/systemd/resolved.conf.d/resolved.conf with this contents:
** "performance" governor is available
** "boost state support" is supported and active.
* Confirm CPU frequency governor:
<pre>
<pre>
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
[Resolve]
powersave
DNS=142.90.100.19
powersave
Domains=triumf.ca
powersave
</pre>
powersave
** systemctl restart systemd-resolved
powersave
** resolvectl
powersave
** systemd-analyze cat-config systemd/resolved.conf
powersave
* disable NetworkManager
powersave
root@daq01:~#
</pre>
* Change governor to "performance":
<pre>
<pre>
root@daq01:~# cpupower frequency-set --governor performance
systemctl disable NetworkManager
Setting cpu: 0
</pre>
Setting cpu: 1
* reboot
Setting cpu: 2
 
Setting cpu: 3
= Configure ECC memory =
Setting cpu: 4
 
Setting cpu: 5
== Configure EDAC ==
Setting cpu: 6
 
Setting cpu: 7
* apt install edac-utils
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
 
performance
=== Intel i3-2120 ===
performance
<pre>
performance
root@musr00:~# edac-ctl --mainboard
performance
edac-ctl: mainboard: Supermicro X9SCL/X9SCM
performance
root@musr00:~# edac-ctl --status
performance
edac-ctl: drivers not loaded.
performance
performance
root@daq01:~# cpupower frequency-info
analyzing CPU 0:
  driver: intel_pstate
  CPUs which run at the same hardware frequency: 0
  CPUs which need to have their frequency coordinated by software: 0
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "performance" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 3.93 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
</pre>
</pre>
* monitor CPU frequency:
 
<pre>
=== Intel E-2236 ===
root@daq01:~# cpupower monitor
<pre>
    | Nehalem                  || Mperf              || Idle_Stats                                   
root@daq00:~# edac-ctl --mainboard
CPU| C3  | C6  | PC3  | PC6  || C0  | Cx  | Freq  || POLL | C1  | C1E  | C3  | C6  | C7s  | C8   
edac-ctl: mainboard: Supermicro X11SCM-F
  0|  0.00|  0.00|  0.00|  0.00|| 88.80| 11.20|  3973||  0.00|  0.00|  0.01|  0.02|  0.31|  0.00|  4.25
root@daq00:~# edac-ctl --status
  4|  0.00|  0.00|  0.00|  0.00||  4.70| 95.30|  3945||  0.00|  0.00|  0.00|  0.00|  0.00|  0.00| 95.03
edac-ctl: drivers are loaded.
  1|  0.73|  3.70|  0.00|  0.00||  4.52| 95.48|  3864||  0.00|  0.01|  1.19|  0.44|  2.82|  0.00| 90.23
root@daq00:~# edac-util
  5|  0.73|  3.70|  0.00|  0.00||  0.37| 99.63|  3807||  0.00|  0.00|  0.03|  0.09|  1.70|  0.00| 97.64
edac-util: No errors to report.
  2|  2.28| 12.86|  0.00|  0.00||  1.41| 98.59|  3829||  0.00|  0.86|  3.17|  0.46|  7.70|  0.00| 85.87
root@daq00:~# edac-util -s
  6|  2.28| 12.86|  0.00|  0.00||  2.88| 97.12|  3856||  0.00|  0.11|  4.56|  2.15| 10.31|  0.00| 78.99
edac-util: EDAC drivers are loaded. 1 MC detected
  3|  1.33|  4.81|  0.00|  0.00||  0.99| 99.01|  3804||  0.00|  0.49|  0.79|  0.01|  1.03|  0.00| 96.12
  7|  1.34|  4.81|  0.00|  0.00||  1.26| 98.74|  3818||  0.00|  0.01|  2.32|  0.47|  5.02|  0.00| 90.06
root@daq01:~#  
</pre>
</pre>
* check that the CPU is not overheating:
* check edac sysfs files (Intel)
<pre>
<pre>
root@daq01:~# sensors
root@daq00:~# ls -l /sys/devices/system/edac/mc/mc0
coretemp-isa-0000
total 0
Adapter: ISA adapter
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_count
Package id 0: +51.0°C  (high = +84.0°C, crit = +100.0°C)
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_noinfo_count
Core 0:       +51.0°C  (high = +84.0°C, crit = +100.0°C)
-r--r--r-- 1 root root 4096 Jan 25 15:10 max_location
Core 1:       +38.0°C  (high = +84.0°C, crit = +100.0°C)
-r--r--r-- 1 root root 4096 Jan 25 15:10 mc_name
Core 2:       +34.0°C  (high = +84.0°C, crit = +100.0°C)
drwxr-xr-x 2 root root    0 Jan 25 15:10 power
Core 3:       +32.0°C  (high = +84.0°C, crit = +100.0°C)
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank0
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank1
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank2
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank3
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank4
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank5
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank6
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank7
--w------- 1 root root 4096 Jan 25 15:10 reset_counters
-r--r--r-- 1 root root 4096 Jan 25 15:10 seconds_since_reset
-r--r--r-- 1 root root 4096 Jan 25 15:10 size_mb
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_count
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Jan 25 15:10 uevent
root@daq00:~#
</pre>
</pre>
* congratulations, we are running at 4 GHz now!


= Setup ubuntu as gateway to private network =
=== Intel E3-1270 v6 ===
 
See also:
* https://daq.triumf.ca/DaqWiki/index.php/VME-CPU#Setup_the_boot_host_computer_.28el7.29
* http://www.triumf.info/wiki/DAQwiki/index.php/Dhcpd_on_eth1
 
== Steps to do ==
 
* assign network numbers to the private network, i.e. 192.168.1.x, 192.168.2.x, etc
* (on the gateway machine, each private network interface has to have a different network number)
* (each network interface can have multiple networks attached, via VLANs or via eth0:0, eth0:1 constructs)
* assign IP addresses on the private network, save them in /etc/hosts i.e. "hvps 192.168.1.10"
* (for simplicity, assign 192.168.1.1 to the gateway machine itself)
* (IP addresses 192.168.1.0 and 192.168.1.255 are "special", do not use them)
* setup DNS server (dnsmasq) to serve contents of /etc/hosts via DNS (otherwise, many programs will see inconsistent name to IP address mapping)
* setup DHCP server (ISC dhcpd or dnsmasq) to give out the IP addresses
* setup tftp, pxelinux and NFS for diskless booting
* setup time server (chronyd) to provide common time to all devices
* setup NAT so machines on private network can access the internet (to get OS updates, etc)
* setup NIS and NFS so machines on the private network can use common home directories
* setup rsync backup of machines on the private network
 
== setup hosts ==
 
* edit /etc/hosts
<pre>
<pre>
192.168.1.101 dsfe01
root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --mainboard
... and so forth
edac-ctl: mainboard: Supermicro X11SSH-F
</pre>
root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --status
edac-ctl: drivers are loaded.
root@grsnis01:~# edac-util
edac-util: No errors to report.
root@grsnis01:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@grsnis01:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_noinfo_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 max_location
-r--r--r-- 1 root root 4096 Feb 19 12:35 mc_name
drwxr-xr-x 2 root root    0 Feb 19 12:35 power
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank0
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank1
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank2
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank3
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank4
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank5
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank6
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank7
--w------- 1 root root 4096 Feb 19 12:35 reset_counters
-r--r--r-- 1 root root 4096 Feb 19 12:35 seconds_since_reset
-r--r--r-- 1 root root 4096 Feb 19 12:35 size_mb
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Feb 19 12:35 uevent
root@grsnis01:~#
</pre>


== setup dns and dhcp ==
=== Intel E3-1245 v6 ===


* apt-get install dnsmasq
* edit /etc/dnsmasq.conf
<pre>
<pre>
# /etc/dnsmasq.conf
[root@alphagdaq ~]# edac-ctl --mainboard
# DNS settings
edac-ctl: mainboard: Supermicro X11SSH-F
#port=0 # disable DNS function
[root@alphagdaq ~]# edac-ctl --mainboard
port=53
edac-ctl: mainboard: Supermicro X11SSH-F
domain-needed
[root@alphagdaq ~]# edac-ctl --status
bogus-priv
edac-ctl: drivers are loaded.
no-resolv
[root@alphagdaq ~]# edac-util
server=142.90.100.19
edac-util: No errors to report.
# DHCP settings
[root@alphagdaq ~]# edac-util -s
interface=enp1s0f0 # DHCP interface
edac-util: EDAC drivers are loaded. 1 MC detected
#dhcp-range=192.168.1.50,192.168.1.150,infinite
[root@alphagdaq ~]# ras-mc-ctl --layout
dhcp-range=192.168.1.0,static
          +-----------------------------------------------+
dhcp-boot=pxelinux.0
          |                      mc0                      |
#dhcp-host=ac:1f:6b:9e:7f:4a,192.168.1.100,10m
          |  csrow0  |  csrow1  |  csrow2  |  csrow3  |
dhcp-host=ac:1f:6b:9e:7f:4a,dsfe01,infinite
----------+-----------------------------------------------+
# TFTP settings
channel1: |  8192 MB  |  8192 MB  |  8192 MB  |  8192 MB  |
enable-tftp
channel0: |  8192 MB  |  8192 MB  |  8192 MB  |  8192 MB  |
tftp-root=/zssd/tftpboot
----------+-----------------------------------------------+
[root@alphagdaq ~]# ras-mc-ctl --error-count
Label              CE UE
mc#0csrow#3channel#0 0 0
mc#0csrow#2channel#1 0 0
mc#0csrow#3channel#1 0 0
mc#0csrow#0channel#0 0 0
mc#0csrow#1channel#1 0 0
mc#0csrow#0channel#1 0 0
mc#0csrow#1channel#0 0 0
mc#0csrow#2channel#0 0 0
[root@alphagdaq ~]# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: Supermicro model X11SSH-F
[root@alphagdaq ~]# ras-mc-ctl --summary
DBD::SQLite::db prepare failed: no such table: mc_event at /usr/sbin/ras-mc-ctl line 1129.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1130.
[root@alphagdaq ~]#
</pre>
</pre>
* mkdir /zssd/tftpboot ### per tftp-root
* systemctl enable dnsmasq
* systemctl restart dnsmasq


== setup chronyd ==
=== AMD 3700X ===


* enable ntp server:
(memory is non-ECC)
* configure and enable chronyd per instructions above
* emacs -nw /etc/chrony/chrony.conf
** add "allow 192.168.1.0/24" at the end
* systemctl restart chronyd
* chronyc tracking ### wait until time is synchronized (a few seconds)
 
== setup diskless network booting ==


=== setup pxelinux ===
<pre>
<pre>
cd ~
root@daq13:~# edac-ctl --mainboard
wget https://www.kernel.org/pub/linux/utils/boot/syslinux/4.xx/syslinux-4.03.tar.bz2
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
tar xjvf syslinux-4.03.tar.bz2
root@daq13:~#
cd syslinux-4.03
root@daq13:~#
cp -pv ./core/pxelinux.0 ./com32/hdt/hdt.c32 ./memdisk/memdisk ./com32/menu/menu.c32 /zssd/tftpboot/
root@daq13:~# edac-ctl --status
edac-ctl: drivers not loaded.
root@daq13:~# edac-util
edac-util: Error: No memory controller data found.
root@daq13:~# edac-util -s
edac-util: EDAC drivers loaded. No memory controllers found
root@daq13:~# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 2 root root    0 Jan 25 15:26 power
lrwxrwxrwx 1 root root    0 Jan 21 16:16 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 Jan 21 16:16 uevent
</pre>
</pre>
* cd /zssd/tftpboot
<pre>
wget http://ladd00.triumf.ca/tftpboot/memtest86+-4.20.iso.zip
wget http://ladd00.triumf.ca/tftpboot/memtest86+-5.01.iso.gz
wget http://ladd00.triumf.ca/tftpboot/modules.alias
wget http://ladd00.triumf.ca/tftpboot/modules.pcimap
wget http://ladd00.triumf.ca/tftpboot/pci.ids
</pre>
* mkdir pxelinux.cfg
* emacs -nw pxelinux.cfg/default
<pre>
default menu.c32
prompt 0


menu title Welcome to the DSVSLICE PXE boot menu
(memory is ECC)


timeout 50
<pre>
 
root@trinatdaq:~# edac-ctl --mainboard
label hdt
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
  kernel hdt.c32
root@trinatdaq:~# edac-ctl --status
 
edac-ctl: drivers are loaded.
label memtest86+-5.01
root@trinatdaq:~# edac-util
  kernel memdisk iso initrd=memtest86+-5.01.iso.gz
edac-util: No errors to report.
 
root@trinatdaq:~# edac-util -s
label memtest86+-4.20
edac-util: EDAC drivers are loaded. 1 MC detected
  kernel memdisk iso initrd=memtest86+-4.20.iso.zip
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc
 
total 0
label vmlinuz-5.3.0-26-generic
drwxr-xr-x 7 root root    0 Dec 15 13:04 mc0
  menu default
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
  kernel vmlinuz-5.3.0-26-generic
lrwxrwxrwx 1 root root    0 Dec 13 18:31 subsystem -> ../../../../bus/edac
  append initrd=initrd.img-5.3.0-26-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.1.1:/zssd/nfsroot/dsfe01 toram ip=dhcp panic=60 BOOTIF=enp1s0f0
-rw-r--r-- 1 root root 4096 Dec 13 18:31 uevent
 
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc/mc0
#end
total 0
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_noinfo_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 max_location
-r--r--r-- 1 root root 4096 Dec 15 13:04 mc_name
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank4
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank5
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank6
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank7
--w------- 1 root root 4096 Dec 15 13:04 reset_counters
-rw-r--r-- 1 root root 4096 Dec 15 13:04 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Dec 15 13:04 seconds_since_reset
-r--r--r-- 1 root root 4096 Dec 15 13:04 size_mb
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Dec 15 13:04 uevent
root@trinatdaq:~#  
</pre>
</pre>


=== setup linux kernel ===
=== AMD 5000G ===
 
* no linux driver for AMD 5000-series "G" CPU
* no mention of ECC in the BIOS settings
* unclear status of ECC support in AMD documentation (sais only "pro" "G" CPUs have ECC)
* unclear status of ECC support in ASUS documentation (web page out of date)
 
=== AMD 5600X ===


* copy the kernel files
<pre>
<pre>
cd /boot
root@daq17:~# edac-ctl --mainboard
rsync -av config* initrd* System.map* vmlinuz* /zssd/tftpboot/
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-XE GAMING WIFI
</pre>
root@daq17:~# edac-ctl --status
* cd /zssd/tftpboot
edac-ctl: drivers are loaded.
* chmod a+r *
root@daq17:~# edac-util
edac-util: No errors to report.
root@daq17:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@daq17:~# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 7 root root    0 Aug 19 19:27 mc0
drwxr-xr-x 2 root root    0 Aug 19 19:27 power
lrwxrwxrwx 1 root root    0 May 10 10:11 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 May 10 10:11 uevent
root@daq17:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Aug 19 19:27 ce_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 ce_noinfo_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 max_location
-r--r--r-- 1 root root 4096 Aug 19 19:27 mc_name
drwxr-xr-x 2 root root    0 Aug 19 19:27 power
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank4
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank5
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank6
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank7
--w------- 1 root root 4096 Aug 19 19:27 reset_counters
-rw-r--r-- 1 root root 4096 Aug 19 19:27 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Aug 19 19:27 seconds_since_reset
-r--r--r-- 1 root root 4096 Aug 19 19:27 size_mb
-r--r--r-- 1 root root 4096 Aug 19 19:27 ue_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Aug 19 19:27 uevent
root@daq17:~#
</pre>


=== setup nfs ===
=== AMD 3955WX ===


* apt-get install nfs-kernel-server
* emacs -nw /etc/exports
<pre>
<pre>
/zssd/nfsroot/dsfe01 dsfe01(rw,no_root_squash,async,no_subtree_check)
root@alphasuperdaq:~/git/scripts/quotareport# edac-ctl --mainboard
edac-ctl: mainboard: ASUSTeK COMPUTER INC. Pro WS WRX80E-SAGE SE WIFI
root@alphasuperdaq:~/git/scripts/quotareport# edac-ctl --status
edac-ctl: drivers are loaded.
root@alphasuperdaq:~/git/scripts/quotareport# edac-util
edac-util: No errors to report.
root@alphasuperdaq:~/git/scripts/quotareport# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@alphasuperdaq:~/git/scripts/quotareport# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 19 root root    0 Dez 12 04:48 mc0
drwxr-xr-x  2 root root    0 Dez 12 04:48 power
lrwxrwxrwx  1 root root    0 Dez  9 05:31 subsystem -> ../../../../bus/edac
-rw-r--r--  1 root root 4096 Dez  9 05:31 uevent
root@alphasuperdaq:~/git/scripts/quotareport#
root@alphasuperdaq:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Feb 28 22:19 ce_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 ce_noinfo_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 max_location
-r--r--r-- 1 root root 4096 Feb 28 22:19 mc_name
drwxr-xr-x 2 root root    0 Dez 12 04:48 power
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank0
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank1
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank10
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank11
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank12
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank13
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank14
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank15
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank2
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank3
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank4
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank5
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank6
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank7
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank8
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank9
--w------- 1 root root 4096 Feb 28 22:19 reset_counters
-rw-r--r-- 1 root root 4096 Feb 28 22:19 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Feb 28 22:19 seconds_since_reset
-r--r--r-- 1 root root 4096 Feb 28 22:19 size_mb
-r--r--r-- 1 root root 4096 Feb 28 22:19 ue_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Feb 28 22:19 uevent
root@alphasuperdaq:~#
root@alphasuperdaq:~# ras-mc-ctl --layout
Use of uninitialized value $max_pos[3] in modulus (%) at /usr/sbin/ras-mc-ctl line 868.
Use of uninitialized value $d in numeric ge (>=) at /usr/sbin/ras-mc-ctl line 869.
Use of uninitialized value $d in sprintf at /usr/sbin/ras-mc-ctl line 872.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
    +-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
    |                                                                                              mc0                                                                                              |
    |                                            csrow0                                            |                                            csrow1                                            |
    | channel0  | channel1  | channel2  | channel3  | channel4  | channel5  | channel6  | channel7  | channel0  | channel1  | channel2  | channel3  | channel4  | channel5  | channel6  | channel7  |
----+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
 
0: |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |    0 MB  |
----+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
root@alphasuperdaq:~# ras-mc-ctl --error-count
Label              CE UE
mc#0csrow#0channel#2 0 0
mc#0csrow#1channel#7 0 0
mc#0csrow#0channel#3 0 0
mc#0csrow#1channel#4 0 0
mc#0csrow#1channel#2 0 0
mc#0csrow#0channel#7 0 0
mc#0csrow#1channel#3 0 0
mc#0csrow#0channel#4 0 0
mc#0csrow#1channel#1 0 0
mc#0csrow#1channel#0 0 0
mc#0csrow#1channel#5 0 0
mc#0csrow#0channel#6 0 0
mc#0csrow#0channel#1 0 0
mc#0csrow#0channel#5 0 0
mc#0csrow#0channel#0 0 0
mc#0csrow#1channel#6 0 0
root@alphasuperdaq:~# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: ASUSTeK COMPUTER INC. model Pro WS WRX80E-SAGE SE WIFI
root@alphasuperdaq:~# ras-mc-ctl --summary
No Memory errors.
 
No PCIe AER errors.
 
No Extlog errors.
 
DBD::SQLite::db prepare failed: no such table: devlink_event at /usr/sbin/ras-mc-ctl line 1181.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1182.
root@alphasuperdaq:~#
</pre>
</pre>
* enable services
 
== Configure rasdaemon ==
 
<pre>
<pre>
systemctl enable nfs-server
apt install rasdaemon
systemctl enable nfs-mountd
</pre>
systemctl enable nfs-idmapd
systemctl restart nfs-server
systemctl restart nfs-mountd
systemctl restart nfs-idmapd
</pre>
* after editing /etc/exports, run
<pre>
<pre>
exportfs -av
systemctl enable rasdaemon
systemctl restart rasdaemon
systemctl status rasdaemon
</pre>
</pre>


=== setup userland ===
<pre>
● rasdaemon.service - RAS daemon to log the RAS events
    Loaded: loaded (/lib/systemd/system/rasdaemon.service; enabled; vendor preset: enabled)
    Active: active (running) since Mon 2021-01-25 15:16:37 PST; 3min 5s ago
  Main PID: 2477175 (rasdaemon)
      Tasks: 1 (limit: 76958)
    Memory: 17.1M
    CGroup: /system.slice/rasdaemon.service
            └─2477175 /usr/sbin/rasdaemon -f -r


* zfs create zssd/nfsroot
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: ras:extlog_mem_event event enabled
* zfs set dedup=verify zssd/nfsroot ### enable deduplication to save disk space because most linux images have mostly identical files
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Enabled event ras:extlog_mem_event
* clone ubuntu
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: ras:extlog_mem_event event enabled
<pre>
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Listening to events for cpus 0 to 11
mkdir /zssd/nfsroot/dsfe01
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: Enabled event ras:extlog_mem_event
cd /
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mc_event events
rsync -avx . /zssd/nfsroot/dsfe01
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording aer_event events
</pre>
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording extlog_event events
* edit config files:
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mce_record events
* cd /zssd/nfsroot/dsfe01
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording arm_event events
* emacs -nw etc/hostname ### change to dsfe01
</pre>
* emacs -nw etc/fstab ### add this
 
== Get reports ==
 
* Intel 2x32GB ECC DIMMs
<pre>
<pre>
192.168.1.1:/zssd/nfsroot/dsfe01 / nfs defaults,nolock 0 0
root@daq00:~# ras-mc-ctl --layout
          +-------------------------+
          |          mc0          |
          |  csrow0  |  csrow1  |
----------+-------------------------+
channel1: |  16384 MB  |  16384 MB  |
channel0: |  16384 MB  |  16384 MB  |
----------+-------------------------+
root@daq00:~# ras-mc-ctl --error-count
Label                  CE      UE
mc#0csrow#1channel#1   0      0
mc#0csrow#1channel#0    0      0
mc#0csrow#0channel#0    0      0
mc#0csrow#0channel#1   0       0
root@daq00:~#
</pre>
</pre>
* emacs -nw etc/chrony/chrony.conf
** comment-out all "pool" and "server" entries
** add entry "server 192.168.1.1 iburst"


After dsfe01 is booted:
* Intel 4x16GB ECC DIMMs
 
<pre>
* disable services:
root@daq00:~# ras-mc-ctl --error-count
<pre>
Label                  CE      UE
systemctl disable apache2
mc#0csrow#0channel#1    0      0
systemctl disable dnsmasq
mc#0csrow#2channel#0    0      0
systemctl disable zfs-import-cache
mc#0csrow#0channel#0    0      0
mc#0csrow#2channel#1    0      0
mc#0csrow#1channel#0    0      0
mc#0csrow#1channel#1    0      0
mc#0csrow#3channel#0    0      0
mc#0csrow#3channel#1    0      0
root@daq00:~#
root@daq00:~# ras-mc-ctl --layout
          +-----------------------+
          |          mc0          |
          |  csrow0  |  csrow1  |
----------+-----------------------+
channel1: |  8192 MB  |  8192 MB  |
channel0: |  8192 MB  |  8192 MB  |
----------+-----------------------+
root@daq00:~#
root@daq00:~#
root@daq00:~#
root@daq00:~# ras-mc-ctl --print-labels
ras-mc-ctl: Error: No dimm labels for Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --summary
No Memory errors.
 
No PCIe AER errors.
 
No Extlog errors.
 
DBD::SQLite::db prepare failed: no such table: devlink_event at /usr/sbin/ras-mc-ctl line 1181.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1182.
root@daq00:~#
</pre>
 
note: ubuntu LTS 22.04 DBD::SQLite::db error is not there.
 
= sensors =
 
== ASUS H110M-A/M.2 ==
 
* BIOS version 4202
* echo modprobe coretemp >> /etc/rc.local
* echo modprobe nct6775 >> /etc/rc.local
 
<pre>
root@midpol:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +33.0°C  (high = +80.0°C, crit = +100.0°C)
Core 0:        +33.0°C  (high = +80.0°C, crit = +100.0°C)
Core 1:        +30.0°C  (high = +80.0°C, crit = +100.0°C)
 
acpitz-acpi-0
Adapter: ACPI interface
temp1:        +27.8°C  (crit = +119.0°C)
temp2:        +29.8°C  (crit = +119.0°C)
 
nct6793-isa-0290
Adapter: ISA adapter
in0:                      368.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                      152.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      928.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.14 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                      1000.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                    152.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                    128.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                    136.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                    120.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                    136.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                    1004 RPM  (min =    0 RPM)
fan2:                    1143 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
fan6:                        0 RPM  (min =    0 RPM)
SYSTIN:                  +118.0°C  (high = +98.0°C, hyst = +95.0°C)  sensor = thermistor
CPUTIN:                    +29.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                  +30.0°C    sensor = thermistor
AUXTIN1:                  +112.0°C    sensor = thermistor
AUXTIN2:                  +111.0°C    sensor = thermistor
AUXTIN3:                  +110.0°C    sensor = thermistor
PECI Agent 0:              +31.0°C  (high = +98.0°C, hyst = +95.0°C)
                                    (crit = +100.0°C)
PECI Agent 0 Calibration:  +36.5°C 
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C 
PCH_CHIP_TEMP:              +0.0°C 
TSI2_TEMP:                +3892314.0°C 
TSI3_TEMP:                +3892314.0°C 
TSI4_TEMP:                +3892314.0°C 
TSI5_TEMP:                +3892314.0°C 
TSI6_TEMP:                +3892314.0°C 
TSI7_TEMP:                +3892314.0°C 
intrusion0:              ALARM
intrusion1:              ALARM
beep_enable:              disabled
 
root@midpol:~#
</pre>
 
== ASUS P9X79 WS ==
 
* https://www.asus.com/supportonly/P9X79%20WS/HelpDesk_Manual/
* BIOS version 4802
* modprobe nct6775
* modprobe coretemp
 
<pre>
root@daq14:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +35.0°C  (high = +82.0°C, crit = +100.0°C)
Core 0:        +29.0°C  (high = +82.0°C, crit = +100.0°C)
Core 1:        +24.0°C  (high = +82.0°C, crit = +100.0°C)
Core 2:        +35.0°C  (high = +82.0°C, crit = +100.0°C)
Core 3:        +32.0°C  (high = +82.0°C, crit = +100.0°C)
 
nouveau-pci-0200
Adapter: PCI adapter
GPU core:    900.00 mV (min =  +0.85 V, max =  +1.00 V)
temp1:        +39.0°C  (high = +95.0°C, hyst =  +3.0°C)
                      (crit = +105.0°C, hyst =  +5.0°C)
                      (emerg = +135.0°C, hyst =  +5.0°C)
 
nct6776-isa-0290
Adapter: ISA adapter
Vcore:          1.04 V  (min =  +0.00 V, max =  +1.74 V)
in1:            1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
AVCC:            3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
+3.3V:          3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:            1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:            2.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:          904.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
3VSB:            3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
Vbat:            3.30 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:          1265 RPM  (min =    0 RPM)
fan2:          1909 RPM  (min =    0 RPM)
fan3:            0 RPM  (min =    0 RPM)
fan4:            0 RPM  (min =    0 RPM)
fan5:            0 RPM  (min =    0 RPM)
SYSTIN:        +34.0°C  (high =  +0.0°C, hyst =  +0.0°C)  ALARM  sensor = thermistor
CPUTIN:        +58.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermal diode
AUXTIN:        +31.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
PECI Agent 0:  +31.0°C  (high = +80.0°C, hyst = +75.0°C)
                        (crit = +96.0°C)
PCH_CHIP_TEMP:  +0.0°C 
PCH_CPU_TEMP:    +0.0°C 
PCH_MCH_TEMP:    +0.0°C 
intrusion0:    ALARM
intrusion1:    ALARM
beep_enable:  disabled
 
root@daq14:~#
</pre>
 
== ASUS TUF GAMING B550M-PLUS WIFI II ==
 
* BIOS 2803, 2806
* echo modprobe nct6775 >> /etc/rc.local
 
<pre>
root@midm9a:~# sensors
nct6798-isa-0290
Adapter: ISA adapter
in0:                      488.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.82 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                      1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                      1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                      1.03 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                      1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                      1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                        0 RPM  (min =    0 RPM)
fan2:                      760 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan7:                    1264 RPM  (min =    0 RPM)
SYSTIN:                    +25.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +22.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                  +95.0°C    sensor = thermistor
AUXTIN1:                  +25.0°C    sensor = thermistor
AUXTIN2:                  +25.0°C    sensor = thermistor
AUXTIN3:                  +25.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +23.5°C 
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C 
PCH_CHIP_TEMP:              +0.0°C 
PCH_CPU_TEMP:              +0.0°C 
TSI0_TEMP:                +32.4°C 
intrusion0:              ALARM
intrusion1:              ALARM
beep_enable:              disabled
 
amdgpu-pci-0800
Adapter: PCI adapter
vddgfx:        1.45 V 
vddnb:      993.00 mV
edge:        +28.0°C 
PPT:          20.00 W 
 
k10temp-pci-00c3
Adapter: PCI adapter
Tctl:        +33.4°C 
 
root@midm9a:~#
</pre>
 
== ASUS ASUS ROG STRIX B550-XE GAMING WIFI ==
 
* BIOS 2423, 2604
* echo modprobe nct6775 >> /etc/rc.local
 
<pre>
root@daq13:~# sensors
nct6798-isa-0290
Adapter: ISA adapter
in0:                      344.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                      992.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                      960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      216.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.30 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.81 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                    960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                    960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                      1.03 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                    280.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                    208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                      845 RPM  (min =    0 RPM)
fan2:                      998 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +28.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +27.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                  +94.0°C    sensor = thermistor
AUXTIN1:                  +28.0°C    sensor = thermistor
AUXTIN2:                  +28.0°C    sensor = thermistor
AUXTIN3:                  +97.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +27.5°C 
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C 
PCH_CHIP_TEMP:              +0.0°C 
PCH_CPU_TEMP:              +0.0°C 
TSI0_TEMP:                +33.6°C 
intrusion0:              ALARM
intrusion1:              ALARM
beep_enable:              disabled
 
amdgpu-pci-0600
Adapter: PCI adapter
vddgfx:        1.45 V 
vddnb:      999.00 mV
edge:        +29.0°C 
PPT:          14.00 W 
 
iwlwifi_1-virtual-0
Adapter: Virtual device
temp1:        +30.0°C 
 
k10temp-pci-00c3
Adapter: PCI adapter
Tctl:        +33.9°C 
 
root@daq13:~#
</pre>
 
== ASUS ASUS ROG STRIX B550-E GAMING ==
 
* bios 2803
* echo modprobe jc42 >> /etc/rc.local
* echo modprobe nct6775 >> /etc/rc.local
 
<pre>
root@daq17:~# sensors
jc42-i2c-1-1b
Adapter: SMBus PIIX4 adapter port 0 at 0b00
temp1:        +25.0°C  (low  =  +0.0°C)                  ALARM (HIGH, CRIT)
                      (high =  +0.0°C, hyst =  +0.0°C)
                      (crit =  +0.0°C, hyst =  +0.0°C)
 
iwlwifi_1-virtual-0
Adapter: Virtual device
temp1:        +28.0°C 
 
nouveau-pci-0800
Adapter: PCI adapter
GPU core:    900.00 mV (min =  +0.85 V, max =  +1.00 V)
temp1:        +34.0°C  (high = +95.0°C, hyst =  +3.0°C)
                      (crit = +105.0°C, hyst =  +5.0°C)
                      (emerg = +135.0°C, hyst =  +5.0°C)
 
nct6798-isa-0290
Adapter: ISA adapter
in0:                      288.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      224.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.31 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.79 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                      1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                      1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                      1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                    280.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                    208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                      843 RPM  (min =    0 RPM)
fan2:                      629 RPM  (min =    0 RPM)
fan3:                      746 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +22.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +25.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                  +93.0°C    sensor = thermistor
AUXTIN1:                  +22.0°C    sensor = thermistor
AUXTIN2:                  +22.0°C    sensor = thermistor
AUXTIN3:                  +96.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +25.5°C 
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C 
PCH_CHIP_TEMP:              +0.0°C 
PCH_CPU_TEMP:              +0.0°C 
TSI0_TEMP:                +27.6°C 
intrusion0:              ALARM
intrusion1:              ALARM
beep_enable:              disabled
 
jc42-i2c-1-1a
Adapter: SMBus PIIX4 adapter port 0 at 0b00
temp1:        +23.2°C  (low  =  +0.0°C)                  ALARM (HIGH, CRIT)
                      (high =  +0.0°C, hyst =  +0.0°C)
                      (crit =  +0.0°C, hyst =  +0.0°C)
 
asusec-isa-0000
Adapter: ISA adapter
CPU_Opt:        0 RPM
Chipset:      +34.0°C 
CPU:          +25.0°C 
Motherboard:  +22.0°C 
T_Sensor:    -40.0°C 
VRM:          +31.0°C 
 
k10temp-pci-00c3
Adapter: PCI adapter
Tctl:        +28.0°C 
Tccd1:        +27.5°C 
 
root@daq17:~#
</pre>
 
== ASUS PRIME B650-PLUS ==
 
* BIOS 1811
* echo modprobe nct6775 >> /etc/rc.local
 
<pre>
root@dsdaqgw:~# sensors
amdgpu-pci-0b00
Adapter: PCI adapter
vddgfx:      930.00 mV
vddnb:        1.19 V 
edge:        +38.0°C 
PPT:          25.10 W 
 
nct6799-isa-0290
Adapter: ISA adapter
in0:                      920.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      320.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.28 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                      1.28 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                      1.10 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                      1.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                    416.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                    328.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                        0 RPM  (min =    0 RPM)
fan2:                    1253 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
fan7:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +33.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +35.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                  +78.0°C    sensor = thermistor
AUXTIN1:                  +11.0°C    sensor = thermistor
AUXTIN2:                  +20.0°C    sensor = thermistor
AUXTIN3:                  +82.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +35.5°C 
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C 
PCH_CHIP_TEMP:              +0.0°C 
PCH_CPU_TEMP:              +0.0°C 
TSI0_TEMP:                +42.6°C 
intrusion0:              ALARM
intrusion1:              OK
beep_enable:              disabled
 
k10temp-pci-00c3
Adapter: PCI adapter
Tctl:        +42.6°C 
Tccd1:        +36.4°C 
 
root@dsdaqgw:~#
</pre>
 
= Enable CPU turbo mode =
 
* Intel CPU has a nominal CPU frequency (i.e. 3.4GHz) and a turbo-boost CPU frequency (i.e. 4.0GHz). Here we will enable this turbo-boost mode.
* Find out CPU capability
<pre>
root@daq01:~# lscpu | grep Hz
Model name:                      Intel(R) Core(TM) i7-6700 CPU @ 3.40GHz
CPU MHz:                        3965.803
CPU max MHz:                    4000.0000
CPU min MHz:                    800.0000
root@daq01:~#
</pre>
* Look up this CPU in the Intel ARK database - google for the CPU model name, i.e.
https://ark.intel.com/content/www/us/en/ark/products/88196/intel-core-i7-6700-processor-8m-cache-up-to-4-00-ghz.html
* Find current frequency settings:
<pre>
root@daq01:~# cpupower frequency-info
analyzing CPU 0:
  driver: intel_pstate
  CPUs which run at the same hardware frequency: 0
  CPUs which need to have their frequency coordinated by software: 0
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "powersave" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 2.72 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
root@daq01:~#
</pre>
* Note the following:
** current governor is "powersave"
** "performance" governor is available
** "boost state support" is supported and active.
* Confirm CPU frequency governor:
<pre>
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
powersave
powersave
powersave
powersave
powersave
powersave
powersave
powersave
root@daq01:~#
</pre>
* Change governor to "performance":
<pre>
root@daq01:~# cpupower frequency-set --governor performance
Setting cpu: 0
Setting cpu: 1
Setting cpu: 2
Setting cpu: 3
Setting cpu: 4
Setting cpu: 5
Setting cpu: 6
Setting cpu: 7
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
performance
performance
performance
performance
performance
performance
performance
performance
root@daq01:~# cpupower frequency-info
analyzing CPU 0:
  driver: intel_pstate
  CPUs which run at the same hardware frequency: 0
  CPUs which need to have their frequency coordinated by software: 0
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "performance" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 3.93 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
</pre>
* monitor CPU frequency:
<pre>
root@daq01:~# cpupower monitor
    | Nehalem                  || Mperf              || Idle_Stats                                   
CPU| C3  | C6  | PC3  | PC6  || C0  | Cx  | Freq  || POLL | C1  | C1E  | C3  | C6  | C7s  | C8   
  0|  0.00|  0.00|  0.00|  0.00|| 88.80| 11.20|  3973||  0.00|  0.00|  0.01|  0.02|  0.31|  0.00|  4.25
  4|  0.00|  0.00|  0.00|  0.00||  4.70| 95.30|  3945||  0.00|  0.00|  0.00|  0.00|  0.00|  0.00| 95.03
  1|  0.73|  3.70|  0.00|  0.00||  4.52| 95.48|  3864||  0.00|  0.01|  1.19|  0.44|  2.82|  0.00| 90.23
  5|  0.73|  3.70|  0.00|  0.00||  0.37| 99.63|  3807||  0.00|  0.00|  0.03|  0.09|  1.70|  0.00| 97.64
  2|  2.28| 12.86|  0.00|  0.00||  1.41| 98.59|  3829||  0.00|  0.86|  3.17|  0.46|  7.70|  0.00| 85.87
  6|  2.28| 12.86|  0.00|  0.00||  2.88| 97.12|  3856||  0.00|  0.11|  4.56|  2.15| 10.31|  0.00| 78.99
  3|  1.33|  4.81|  0.00|  0.00||  0.99| 99.01|  3804||  0.00|  0.49|  0.79|  0.01|  1.03|  0.00| 96.12
  7|  1.34|  4.81|  0.00|  0.00||  1.26| 98.74|  3818||  0.00|  0.01|  2.32|  0.47|  5.02|  0.00| 90.06
root@daq01:~#
</pre>
* check that the CPU is not overheating:
<pre>
root@daq01:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +51.0°C  (high = +84.0°C, crit = +100.0°C)
Core 0:        +51.0°C  (high = +84.0°C, crit = +100.0°C)
Core 1:        +38.0°C  (high = +84.0°C, crit = +100.0°C)
Core 2:        +34.0°C  (high = +84.0°C, crit = +100.0°C)
Core 3:        +32.0°C  (high = +84.0°C, crit = +100.0°C)
</pre>
* congratulations, we are running at 4 GHz now!
 
= Setup ubuntu as gateway to private network =
 
See also:
* https://daq.triumf.ca/DaqWiki/index.php/VME-CPU#Setup_the_boot_host_computer_.28el7.29
* http://www.triumf.info/wiki/DAQwiki/index.php/Dhcpd_on_eth1
 
== Steps to do ==
 
!!! UPDATED 16feb2024 Ubuntu-22.04.03 !!!
 
* assign network numbers to the private network, i.e. 192.168.1.x, 192.168.2.x, etc
* (on the gateway machine, each private network interface has to have a different network number)
* (each network interface can have multiple networks attached, via VLANs or via eth0:0, eth0:1 constructs)
* assign IP addresses on the private network, save them in /etc/hosts i.e. "hvps 192.168.1.10"
* (for simplicity, assign 192.168.1.1 to the gateway machine itself)
* (IP addresses 192.168.1.0 and 192.168.1.255 are "special", do not use them)
* setup DNS server (dnsmasq) to serve contents of /etc/hosts via DNS (otherwise, many programs will see inconsistent name to IP address mapping)
* setup DHCP server (dnsmasq) to give out the IP addresses
* setup TFTP server (dnsmasq), pxelinux and NFS for diskless booting
* setup time server (chronyd) to provide common time to all devices
* setup NAT so machines on private network can access the internet (to get OS updates, etc)
* setup NIS and NFS so machines on the private network can use common home directories
* setup rsync backup of machines on the private network
 
== setup hosts ==
 
* edit /etc/hosts
<pre>
192.168.1.101 dsfe01
... and so forth
</pre>
 
== setup dns and dhcp ==
 
!!! updated 16feb2024 for Ubuntu 22.04.3 !!!
 
!!! note: stock systemd-resolved remains, is configured to forward queries to dnsmasq, configured to forward queries to TRIUMF DNS !!!
 
!!! note: per authors of systemd, bare hostnames are not permitted, a DNS domain name must always be used. DNS domain name "dsdaq" is used in this example !!!
 
* apt install dnsmasq
* ensure dnsmasq starts after all interfaces are up (Ubuntu-22)
<pre>
mkdir /etc/systemd/system/dnsmasq.service.d
echo -e "[Unit]\nAfter=network-online.target\n" > /etc/systemd/system/dnsmasq.service.d/local.conf
</pre>
* edit /etc/dnsmasq.conf
<pre>
# /etc/dnsmasq.conf
# DNS settings
#port=0 # disable DNS function
port=53 # enable DNS function
bind-interfaces # do not collide with systemd-resolved, we use 127.0.0.1:53, they use 127.0.0.53:53
domain-needed
bogus-priv
no-resolv
#log-queries # log DNS quesries
# TRIUMF DNS settings
server=142.90.100.19
expand-hosts
domain=dsdaq
local=/dsdaq/
localmx # do not forward MX queries to TRIUMF
 
# DHCP settings
interface=enp1s0f0 # VX network 192.168.0.x
#interface=missing  # FEP and TSP network 192.168.1.x
interface=enp1s0f1 # controls network 192.168.2.x
#dhcp-range=192.168.1.50,192.168.1.150,infinite
dhcp-range=192.168.0.0,static
dhcp-range=192.168.2.0,static
log-dhcp # log DHCP queries
#quiet-dhcp
dhcp-ignore=tag:!known
#dhcp-boot=pxelinux.0
dhcp-option=option:dns-server,192.168.0.248
dhcp-option=option:ntp-server,192.168.0.248
# TFTP settings
enable-tftp
tftp-root=/tftpboot
</pre>
* #mkdir /tftpboot ### per tftp-root (if no ZFS)
* zfs create -o mountpoint=/tftpboot rpool/tftpboot ### (if root is ZFS)
* create resolved-dsdaq.conf with main IP address of dnsmasq
<pre>
[Resolve]
DNS=192.168.0.248
Domains=dsdaq triumf.ca
</pre>
* mkdir -p /etc/systemd/resolved.conf.d/
* /bin/rm -f /etc/systemd/resolved.conf.d/*.conf
* cp resolved-dsdaq.conf /etc/systemd/resolved.conf.d/
* systemctl stop systemd-resolved.service
* systemctl disable systemd-resolved.service
* systemctl enable dnsmasq
* systemctl restart dnsmasq
* try to "ping" or "host" some names from /etc/hosts, it should work
* try to ping daq00, daq00.triumf.ca, all should work
* resolved-dsdaq.conf goes into /etc/systemd/resolved.conf.d/ of all machines on the private network
* if not using systemd-resolved, edit /etc/resolv.conf
 
== setup chronyd ==
 
* enable ntp server:
* disable systemd-timesyncd, configure and enable chronyd per instructions above
* create dsdaq.conf
<pre>
# chrony config for dsdaq server
 
#allow 192.168.0.0
#allow 192.168.1.0
#allow 192.168.2.0
allow all
 
# end
</pre>
* cp dsdaq.conf /etc/chrony/conf.d/
* systemctl restart chronyd
* chronyc tracking ### wait until time is synchronized (a few seconds)
* create dsdaq.sources # use hostname or IP address of chronyd server
<pre>
# Put this file in /etc/chrony/sources.d
# systemctl restart chrony
# chronyc sources
# chronyc tracking
server dsdaqgw iburst prefer
# end
</pre>
* dsdaq.sources goes to /etc/chrony/sources.d of all machines on the private network
 
== setup diskless network booting ==
 
=== setup pxelinux for legacy pxe boot ===
 
* add bits in dnsmasq.conf
<pre>
dhcp-host=ac:1f:6b:9e:7f:4a,dsfe01,infinite
dhcp-boot=pxelinux.0
dhcp-option=17,"192.168.0.251:/nfsroot/%s,vers=3"
</pre>
* setup pxelinux for Ubuntu-18
<pre>
cd ~
wget https://www.kernel.org/pub/linux/utils/boot/syslinux/4.xx/syslinux-4.03.tar.bz2
tar xjvf syslinux-4.03.tar.bz2
cd syslinux-4.03
cp -pv ./core/pxelinux.0 ./com32/hdt/hdt.c32 ./memdisk/memdisk ./com32/menu/menu.c32 /zssd/tftpboot/
</pre>
* cd /zssd/tftpboot
<pre>
wget http://ladd00.triumf.ca/tftpboot/memtest86+-4.20.iso.zip
wget http://ladd00.triumf.ca/tftpboot/memtest86+-5.01.iso.gz
wget http://ladd00.triumf.ca/tftpboot/modules.alias
wget http://ladd00.triumf.ca/tftpboot/modules.pcimap
wget http://ladd00.triumf.ca/tftpboot/pci.ids
</pre>
* mkdir pxelinux.cfg
* emacs -nw pxelinux.cfg/default
<pre>
default menu.c32
prompt 0
 
menu title Welcome to the DSVSLICE PXE boot menu
 
timeout 50
 
label hdt
  kernel hdt.c32
 
label memtest86+-5.01
  kernel memdisk iso initrd=memtest86+-5.01.iso.gz
 
label memtest86+-4.20
  kernel memdisk iso initrd=memtest86+-4.20.iso.zip
 
label vmlinuz-5.3.0-26-generic
  menu default
  kernel vmlinuz-5.3.0-26-generic
  append initrd=initrd.img-5.3.0-26-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.1.1:/zssd/nfsroot/dsfe01 toram ip=dhcp panic=60 BOOTIF=enp1s0f0
 
#end
</pre>
 
=== setup pxelinux for efi pxe boot ===
 
* https://c-nergy.be/blog/?p=13808
* add dnsmasq.conf bits. note: root-path does not actually work, it is hardwired pxelinux.cfg/default file.
<pre>
# uefi pxe
 
dhcp-boot=tag:uefipxe,uefi/syslinux.efi
dhcp-option-force=tag:fe01,option:root-path,192.168.0.248:/nfsroot/fe01
 
# VX network 192.168.0.x
 
dhcp-host=40:a6:b7:c1:d9:c5,fe01,infinite,set:uefipxe,set:fe01
</pre>
* apt install syslinux pxelinux syslinux-common syslinux-efi syslinux-utils
<pre>
mkdir /tftpboot/uefi
cp /usr/lib/SYSLINUX.EFI/efi64/syslinux.efi /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/ldlinux.e64 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/menu.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/hdt.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libutil.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libmenu.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libcom32.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libgpl.c32 /tftpboot/uefi/
</pre>
* try to boot, it should bomb with "cannot load pxelinux.cfg/default"
* mkdir /tftpboot/uefi/pxelinux.cfg
* create /tftpboot/uefi/pxelinux.cfg/default, note nfsroot path is hardwired, note "http:" is used to load vmlinuz and initrd files (because tftp is super slow)
<pre>
default menu.c32
prompt 0
 
menu title Welcome to the DSDAQGW UEFI PXE boot menu
 
timeout 50
 
label vmlinuz-6.5.0-17-generic
  kernel http://192.168.0.248:8088/uefi/vmlinuz-6.5.0-17-generic
  append initrd=http://192.168.0.248:8088/uefi/initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=auto rw ip=dhcp panic=60
 
# append initrd=http://192.168.0.248:8088/uefi/initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.0.248:/nfsroot/fe01 rw ip=dhcp panic=60
 
#  append initrd=initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.0.248:/nfsroot/fe01 rw ip=dhcp panic=60
#  append initrd=initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=auto ip=dhcp rw panic=60
 
#end
</pre>
* try to boot, it will bomb with "cannot load http://...."
* install mini_httpd on port 8088, see https://acme.com/software/mini_httpd/
<pre>
apt install mini-httpd
emacs -nw /etc/default/mini-httpd # set "START=1"
emacs -nw /etc/mini-httpd.conf # set "host=192.168.0.248", "port=8088", "data_dir=/tftpboot"
mkdir /etc/systemd/system/mini-httpd.service.d
echo -e "[Unit]\nAfter=network-online.target\n" > /etc/systemd/system/mini-httpd.service.d/local.conf
systemctl enable mini-httpd
systemctl restart mini-httpd
systemctl status mini-httpd
wget http://192.168.0.248:8088/uefi/syslinux.efi
tail -100 /var/log/mini_httpd.log
</pre>
* fix initramfs bug for "nfsroot=auto", otherwise, "nfsroot=" has to be different for each machine and you have to have separate pxelinux config files for each machine
** emacs -nw /usr/lib/initramfs-tools/etc/dhcp/dhclient-enter-hooks.d/config
** add "echo ROOTPATH=..." if it is missing (Ubuntu LTS 22.04)
<pre>
                echo "ROOTSERVER='${new_routers%% *}'"
                echo "ROOTPATH='$new_root_path'"
                echo "HOSTNAME='$new_host_name'"
</pre>
** regenerate initramfs (be careful you generate it for the right kernel!)
** see https://bugs.launchpad.net/ubuntu/+source/initramfs-tools/+bug/2054482
<pre>
mkinitramfs 6.5.0-18-generic
</pre>
* copy linux kernel and initrd
<pre>
cp /boot/vmlinuz-6.5.0-18-generic /tftpboot/uefi/
cp /boot/initrd.img-6.5.0-18-generic /tftpboot/uefi/
chmod a+r /tftpboot/uefi/*
</pre>
* try to boot, should bomb with messages about "trying to mount root filesystem"
* tail /var/log/syslog
<pre>
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 vendor class: PXEClient:Arch:00007:UNDI:003016
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 1:netmask, 2:time-offset, 3:router, 4, 5,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 6:dns-server, 12:hostname, 13:boot-file-size,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 15:domain-name, 17:root-path, 18:extension-path,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 22:max-datagram-reassembly, 23:default-ttl,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 28:broadcast, 40:nis-domain, 41:nis-server,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 42:ntp-server, 43:vendor-encap, 50:requested-address,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 51:lease-time, 54:server-identifier, 58:T1,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 59:T2, 60:vendor-class, 66:tftp-server, 67:bootfile-name,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 97:client-machine-id, 128, 129, 130, 131,
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 132, 133, 134, 135
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 next server: 192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 broadcast response
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  1 option: 53 message-type  2
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 18 option: 67 bootfile-name  uefi/syslinux.efi
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 12 hostname  fe01
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 vendor class: PXEClient:Arch:00007:UNDI:003016
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 1:netmask, 2:time-offset, 3:router, 4, 5,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 6:dns-server, 12:hostname, 13:boot-file-size,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 15:domain-name, 17:root-path, 18:extension-path,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 22:max-datagram-reassembly, 23:default-ttl,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 28:broadcast, 40:nis-domain, 41:nis-server,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 42:ntp-server, 43:vendor-encap, 50:requested-address,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 51:lease-time, 54:server-identifier, 58:T1,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 59:T2, 60:vendor-class, 66:tftp-server, 67:bootfile-name,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 97:client-machine-id, 128, 129, 130, 131,
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 132, 133, 134, 135
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 next server: 192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 broadcast response
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  1 option: 53 message-type  5
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 18 option: 67 bootfile-name  uefi/syslinux.efi
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 12 hostname  fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: error 8 User aborted the transfer received from 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/syslinux.efi to 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/syslinux.efi to 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 requested options: 1:netmask, 3:router, 6:dns-server
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 bootfile name: uefi/syslinux.efi
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 next server: 192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 broadcast response
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  1 option: 53 message-type  2
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 requested options: 1:netmask, 3:router, 6:dns-server
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 bootfile name: uefi/syslinux.efi
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 next server: 192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 broadcast response
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  1 option: 53 message-type  5
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/ldlinux.e64 to 192.168.0.110
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/01-40-a6-b7-c1-d9-c5 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8006E not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8006 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A800 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A80 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/pxelinux.cfg/default to 192.168.0.110
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/menu.c32 to 192.168.0.110
Feb 16 20:43:10 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/libutil.c32 to 192.168.0.110
Feb 16 20:43:10 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/pxelinux.cfg/default to 192.168.0.110
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 client provides name: dsdaqgw.triumf.ca
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 1:netmask, 28:broadcast, 2:time-offset, 3:router,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 15:domain-name, 6:dns-server, 119:domain-search,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 12:hostname, 44:netbios-ns, 47:netbios-scope,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 26:mtu, 121:classless-static-route, 42:ntp-server
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 bootfile name: uefi/syslinux.efi
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 next server: 192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  1 option: 53 message-type  2
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 client provides name: dsdaqgw.triumf.ca
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 1:netmask, 28:broadcast, 2:time-offset, 3:router,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 15:domain-name, 6:dns-server, 119:domain-search,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 12:hostname, 44:netbios-ns, 47:netbios-scope,
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 26:mtu, 121:classless-static-route, 42:ntp-server
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 bootfile name: uefi/syslinux.efi
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 next server: 192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  1 option: 53 message-type  5
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 12 hostname  fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw rpc.mountd[3350210]: authenticated mount request from 192.168.0.110:981 for /nfsroot/fe01 (/nfsroot/fe01)
Feb 16 20:45:07 dsdaqgw rpc.mountd[3350210]: authenticated unmount request from 192.168.0.110:859 for /nfsroot/fe01/tmp/autoDY4k5u (/nfsroot/fe01)
</pre>
* tail /var/log/mini_httpd.log
<pre>
192.168.0.110 - - [16/Feb/2024:20:43:15 -0800] "GET /uefi/vmlinuz-6.5.0-17-generic HTTP/1.0" 200 14227944 "" "Syslinux/6.04"
192.168.0.110 - - [16/Feb/2024:20:43:24 -0800] "GET /uefi/initrd.img-6.5.0-17-generic HTTP/1.0" 200 137824833 "" "Syslinux/6.04"
</pre>
 
=== setup efi http boot ===
 
https://documentation.suse.com/sles/15-SP2/html/SLES-all/cha-deployment-prep-uefi-httpboot.html
 
=== setup linux kernel ===
 
* copy the kernel files
<pre>
cd /boot
rsync -av config* initrd* System.map* vmlinuz* /tftpboot/
</pre>
* cd /tftpboot
* chmod a+r *
 
=== setup nfs ===
 
* apt-get install nfs-kernel-server
* enable NFS over UDP, edit /etc/nfs.conf add "udp=y":
<pre>
udp=y
</pre>
<pre>
systemctl restart nfs-server.service
</pre>
* emacs -nw /etc/exports
<pre>
/nfsroot/dsfe01 dsfe01(rw,no_root_squash,async,no_subtree_check)
</pre>
* enable services
<pre>
systemctl enable nfs-server
systemctl enable nfs-mountd
systemctl enable nfs-idmapd
systemctl restart nfs-server
systemctl restart nfs-mountd
systemctl restart nfs-idmapd
</pre>
* after editing /etc/exports, run
<pre>
exportfs -av
</pre>
 
=== setup userland ===
 
!!! ubuntu-18 version !!!
 
* zfs create rpool/nfsroot
* zfs set dedup=verify rpool/nfsroot ### enable deduplication to save disk space because most linux images have mostly identical files
* clone ubuntu
<pre>
mkdir /nfsroot/dsfe01
cd /
rsync -avx . /nfsroot/dsfe01
</pre>
* edit config files:
* cd /nfsroot/dsfe01
* emacs -nw etc/hostname ### change to dsfe01
* emacs -nw etc/mailname ### change to dsfe01
* emacs -nw etc/yp.conf ### change daq00.triumf.ca to musr00.triumf.ca
* emacs -nw etc/defaultdomain ### change to MUSR-NIS
* cp -pvf ../lxcpet-SL610/etc/ssh/*key* etc/ssh/ ### preserve the ssh keys
* emacs -nw opt/gonodeinfo/gonodeinfo.conf ### update information
* emacs -nw root/.ssh/authorized_keys ### update root ssh keys
* emacs -nw etc/fstab ### add this
<pre>
192.168.1.1:/nfsroot/dsfe01 / nfs defaults,nolock 0 0
</pre>
* emacs -nw etc/chrony/chrony.conf
** comment-out all "pool" and "server" entries
** add entry "server 192.168.1.1 iburst"
 
After dsfe01 is booted:
 
* disable services:
<pre>
systemctl disable apache2
systemctl disable dnsmasq
systemctl disable zfs-import-cache
</pre>
 
To setup additional machines, clone dsfe01 instead of cloning the gateway machine
 
=== Allow manpages to be viewed ===
 
If <code>/</code> is mounted over NFS, <code>man</code> will report a permission error. Fix it with:
 
<pre>
ln -s /etc/apparmor.d/usr.bin.man /etc/apparmor.d/disable/
apparmor_parser -R /etc/apparmor.d/usr.bin.man
</pre>
 
== setup shared home directory ==
 
=== on the gateway machine ===
* define netgroups
* emacs -nw /etc/netgroup
<pre>
dsfe (dsfe01,,) (dsfe02,,)
</pre>
* emacs -nw /etc/nsswitch.conf ### edit the netgroup line to read:
<pre>
netgroup: files
</pre>
* export the home directories:
* emacs -nw /etc/exports ### add this:
<pre>
/zssd/home1 @dsfe(rw,no_root_squash,async,no_subtree_check)
</pre>
* exportfs -rc
 
=== on the frontend machine ===
 
* mkdir /home
* emacs -nw /etc/fstab ### add this:
<pre>
192.168.1.1:/zssd/home1 /home nfs defaults 0 0
</pre>
* mount -a
 
== setup NAT ==
 
NAT allows machines on the private network to connect to the internet: https://en.wikipedia.org/wiki/Network_address_translation
 
In these examples:
* replace "eno1" with name of the outgoing interface (the one connected to the TRIUMF network).
* replace "enp11s0" with name of the private network interface (192.168.1.x network)
 
* emacs -nw /etc/rc.local ### add this:
<pre>
# /etc/rc.local
 
# enable NAT
 
/sbin/iptables -t nat -A POSTROUTING -o eno1 -j MASQUERADE
iptables -L -v
 
# uncomment following lines if machine has prohibitive FORWARD rules:
#/sbin/iptables -I FORWARD -i eno1 -o enp11s0 -m state --state RELATED,ESTABLISHED -j ACCEPT
#/sbin/iptables -I FORWARD -i enp11s0 -o eno1 -j ACCEPT
#iptables -L -v
 
iptables -L -v
sysctl -w net.ipv4.ip_forward=1
#sysctl -a | grep forward
 
sh /etc/firewall-rfc1918.sh
 
# end
</pre>
* emacs -nw /etc/firewall-rfc1918.sh
<pre>
# firewall-rfc1918.sh
 
# prevent RFC1918 private network IP addresses from
# going in and out from our uplink.
 
ETH=eno1
 
iptables -F in-rfc1918
iptables -N in-rfc1918
iptables -A in-rfc1918 --dst 10.0.0.0/8      -j REJECT
iptables -A in-rfc1918 --dst 172.16.0.0/12  -j REJECT
iptables -A in-rfc1918 --dst 192.168.0.0/16  -j REJECT
 
iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -I INPUT -j in-rfc1918 -i $ETH
 
iptables -F out-rfc1918
iptables -N out-rfc1918
iptables -A out-rfc1918 --dst 10.0.0.0/8      -j REJECT
iptables -A out-rfc1918 --dst 172.16.0.0/12  -j REJECT
iptables -A out-rfc1918 --dst 192.168.0.0/16  -j REJECT
 
iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -I OUTPUT -j out-rfc1918 -o $ETH
 
iptables -D FORWARD -j out-rfc1918 -o $ETH
iptables -D FORWARD -j out-rfc1918 -o $ETH
iptables -I FORWARD -j out-rfc1918 -o $ETH
 
# allow TRIUMF-SECURE network
 
iptables -I in-rfc1918 -s 10.90.0.0/255.255.0.0 -j ACCEPT
iptables -I out-rfc1918 -d 10.90.0.0/255.255.0.0 -j ACCEPT
 
# show configuration
 
iptables -L -v
 
#end
</pre>
 
= KVM =
 
<pre>
apt install cpu-checker
 
root@daq13:~# kvm-ok
INFO: /dev/kvm exists
KVM acceleration can be used
root@daq13:~#
 
(if not, shutdown, go into BIOS settings, enable CPU virtualization)
 
apt install virtinst ### will install many packages
apt install libvirt-clients libvirt-daemon-system-systemd libvirt-daemon qemu qemu-kvm libvirt-daemon-system virtinst bridge-utils
 
root@daq13:/home1/wheel# virsh list --all
Id  Name          State
------------------------------
1    ubuntu-guest  running
 
apt install virt-manager
 
virt-install --name ubuntu-guest --os-variant ubuntu20.04 --vcpus 2 --ram 2048 --location /daq/daqstore/olchansk/linux/Ubuntu/ubuntu-20.04.3-desktop-amd64.iso --network bridge=virbr0,model=virtio --graphics none --extra-args='console=ttyS0,115200n8 serial'
 
virtual machine will start, boot, etc
to get out of it, CTRL + Shift followed by ]
 
ssh wheel@daq13
virt-manager
 
run virt-install again, omit "--graphics none", open graphics console from virt-manager, it booted into ubuntu installer desktop
 
virt-install --name test10 --os-variant centos6.10 --vcpus 2 --ram 2048 --import --filesystem /kvm_ladd00,/ --network bridge=virbr0,model=virtio --boot kernel=/kvm_ladd00/boot/vmlinuz-2.6.32-754.35.1.el6.x86_64,initrd=/kvm_ladd00/boot/initramfs-2.6.32-754.35.1.el6.x86_64.img,kernel_args="root=/dev/sda console=ttyS0,115200n8 serial" --graphics none
 
virt-install --name test14 --os-variant centos6.10 --vcpus 2 --ram 2048 --import --disk /tmp/xxx/ladd00.img,bus=sata --network bridge=virbr0,model=virtio --boot kernel=/kvm_ladd00/boot/vmlinuz-2.6.32-754.35.1.el6.x86_64,initrd=/kvm_ladd00/boot/initramfs-2.6.32-754.35.1.el6.x86_64.img,kernel_args="root=/dev/sda console=ttyS0,115200n8 serial rdshell" --graphics none --check path_in_use=off
</pre>
 
build image
 
<pre>
dd if=/dev/zero of=/tmp/xxx/ladd00.img bs=1024M count=20
mkfs.ext3 /tmp/xxx/ladd00.img ### ext4 fails to mount by SL6 kernel, "unknown ext4 options"
cd /kvm_ladd00/
mount -o loop /tmp/xxx/ladd00.img /mnt/tmp
rsync -av . /mnt/tmp/ --delete
umount /mnt/tmp
</pre>
 
on the guest, configure network: /etc/rc.local
<pre>
#!/bin/sh
#
# This script will be executed *after* all the other init scripts.
# You can put your own initialization stuff in here if you don't
# want to do the full Sys V style init stuff.
 
touch /var/lock/subsys/local
 
ifconfig eth2 192.168.122.2
route add -net 0.0.0.0 gw 192.168.122.1
ifconfig -a
netstat -rn
 
# end
</pre>
</pre>


To setup additional machines, clone dsfe01 instead of cloning the gateway machine
= ARM cross-compiler =


=== Allow manpages to be viewed ===
NOTE!!!


If <code>/</code> is mounted over NFS, <code>man</code> will report a permission error. Fix it with:
THIS IS NOT AN AARCH64 (arm64) CROSSCOMPILER!


<pre>
NOTE!!!
ln -s /etc/apparmor.d/usr.bin.man /etc/apparmor.d/disable/
apparmor_parser -R /etc/apparmor.d/usr.bin.man
</pre>


== setup shared home directory ==
* install packages:
 
=== on the gateway machine ===
* define netgroups
* emacs -nw /etc/netgroup
<pre>
dsfe (dsfe01,,) (dsfe02,,)
</pre>
* emacs -nw /etc/nsswitch.conf ### edit the netgroup line to read:
<pre>
<pre>
netgroup: files
apt install libgcc-9-dev-arm64-cross
apt install gcc-arm-linux-gnueabi
apt install gcc-arm-linux-gnueabihf
apt install g++-arm-linux-gnueabihf
apt install g++-arm-linux-gnueabi
</pre>
</pre>
* export the home directories:
* find out the correct -march setting, on the target machine, run:
* emacs -nw /etc/exports ### add this:
<pre>
<pre>
/zssd/home1 @dsfe(rw,no_root_squash,async,no_subtree_check)
root@gdm00:~# g++ -Q --help=target | grep march
  -march=                    armv8-a
</pre>
</pre>
* exportfs -rc


=== on the frontend machine ===


* mkdir /home
* emacs -nw /etc/fstab ### add this:
<pre>
<pre>
192.168.1.1:/zssd/home1 /home nfs defaults 0 0
arm-linux-gnueabi-gcc -o ttcp1 ttcp.c -march=armv7 -static
arm-linux-gnueabi-gcc -o memcpy.armv7 memcpy.cc -march=armv7 -static -O2
</pre>
</pre>
* mount -a


== setup NAT ==
= 32-bit intel cross-compiler =


NAT allows machines on the private network to connect to the internet: https://en.wikipedia.org/wiki/Network_address_translation
Ubuntu 22.04:


In these examples:
* replace "eno1" with name of the outgoing interface (the one connected to the TRIUMF network).
* replace "enp11s0" with name of the private network interface (192.168.1.x network)
* emacs -nw /etc/rc.local ### add this:
<pre>
<pre>
# /etc/rc.local
apt install libstdc++-11-dev:i386
 
apt install zlib1g-dev:i386
/sbin/iptables -t nat -A POSTROUTING -o eno1 -j MASQUERADE
iptables -L -v
 
# uncomment following lines if machine has prohibitive FORWARD rules:
#/sbin/iptables -I FORWARD -i eno1 -o enp11s0 -m state --state RELATED,ESTABLISHED -j ACCEPT
#/sbin/iptables -I FORWARD -i enp11s0 -o eno1 -j ACCEPT
#iptables -L -v
 
iptables -L -v
sysctl -w net.ipv4.ip_forward=1
#sysctl -a | grep forward
 
sh /etc/firewall-rfc1918.sh
 
# end
</pre>
</pre>
* emacs -nw /etc/firewall-rfc1918.sh
<pre>
# firewall-rfc1918.sh
# prevent RFC1918 private network IP addresses from
# going in and out from our uplink.
ETH=eno1


iptables -F in-rfc1918
NOTES:
iptables -N in-rfc1918
* "g++ -m32" does not find libstdc++, please use "g++ -m32 -L/usr/lib/gcc/i686-linux-gnu/11/"
iptables -A in-rfc1918 --dst 10.0.0.0/8      -j REJECT
* to cross-build 32-bit MIDAS, use "make linux32".
iptables -A in-rfc1918 --dst 172.16.0.0/12  -j REJECT
* executables cross-build on Ubuntu-22 do NOT run on 32-bit Debain-11 (GLIBC and GLIBCXX version mismatch)
iptables -A in-rfc1918 --dst 192.168.0.0/16  -j REJECT
* executables cross-build on Ubuntu-22 run on 32-bit Debian-12.
iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -I INPUT -j in-rfc1918 -i $ETH
 
iptables -F out-rfc1918
iptables -N out-rfc1918
iptables -A out-rfc1918 --dst 10.0.0.0/8      -j REJECT
iptables -A out-rfc1918 --dst 172.16.0.0/12  -j REJECT
iptables -A out-rfc1918 --dst 192.168.0.0/16  -j REJECT
iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -I OUTPUT -j out-rfc1918 -o $ETH
 
iptables -L -v
 
#end
</pre>

Latest revision as of 15:59, 19 April 2024

About Ubuntu

AAA


Ubuntu version

lsb_release -a
uname -a

Ubuntu installer

  • updated for Ububtu LTS 20.04.01, 22.04.1
  • download the latest Ubuntu LTS desktop installer iso image
  • dd the image to a USB key
  • power down, disconnect all disks (all HDDs, all SSDs, all M.2)
  • connect the SSD to be used as system disk
  • if system will use mirrored SSDs (using ZFS mirror), leave second SSD disconnected, we will activate it later
  • power up
  • boot from USB key in legacy mode or UEFI mode (select this in the BIOS boot menu - F8 for ASUS, F11 for Supermicro)
  • follow the instruction:
  • "try ubuntu or install ubuntu" - choose "install"
  • select language - accept default
  • "updates and other software" - accept default settings ("normal install")
  • "installation type" - select "advanced features" and "experimental: use ZFS"
  • accept partition choice
  • "where are you?" - select "Vancouver" (PST time zone)
  • "who are you?" - leave all fields blank, except "username" set to "wheel", "password" set to the root password. hostname will be set later after configuring the network
  • installation runs in a few minutes, when finished, reboot
  • login as user wheel
  • answer annouying questions:
  • "livepatch" - say "next"
  • "help improve" - select "do not send", say "next"
  • "privacy" - leave "location" as "off", say "next"
  • "ready to go", say "done"
  • right-click on the desktop, say "open in terminal", a shell will open
  • say "sudo /bin/bash", enter the root password, you now have the root shell
  • run nm-connection-editor to configure the network. use netmask 255.255.224.0, gateway 142.90.100.18, DNS 142.90.100.19, search path "triumf.ca"
  • after network is up (can ping ladd00), continue with post-installation steps below

Install instructions

prepare

apt update
apt upgrade

install ssh

apt install ssh

install git/scripts

apt -y install git
mkdir ~root/git
cd ~root/git
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd scripts
git pull

configure hostname

vi /etc/hostname

disable swap

ubuntu installer creates a 2 GB swap partition, not useful on 32-64 GB machine, disable it: 

vi /etc/fstab ### comment out the "swap" line

maybe reboot

this is a good point to reboot the machine to boot the latest kernel and to set the correct hostname

install etckeeper

keep contents of /etc in a git repository: 

apt -y install etckeeper

set timezone

timedatectl list-timezones | grep -i vancouver
timedatectl set-timezone America/Vancouver

install time synchronization

apt -y install chrony
#echo server time1.triumf.ca iburst >> /etc/chrony/chrony.conf
#echo server time2.triumf.ca iburst >> /etc/chrony/chrony.conf
#echo server time3.triumf.ca iburst >> /etc/chrony/chrony.conf
cd ~/git/scripts
git pull
cd ~
cp ~/git/scripts/etc/triumf.sources /etc/chrony/sources.d/
systemctl disable systemd-timesyncd.service
systemctl stop systemd-timesyncd.service
systemctl disable ntp
systemctl stop ntp
systemctl enable chrony
systemctl restart chrony
chronyc sources
chronyc tracking

NOTE1: if time1, time2, time3 are already listed in /etc/crony/chrony.conf, please remove them and restart chrony.

NOTE2: if time1, time2, time3 are not listed in "chronyc tracking" or if they are not selected by "chronyc tracking", check that /etc/crony/chrony.conf contains "sourcedir /etc/chrony/sources.d". old versions of this file may not have it.

NOTE3: read https://chrony-project.org/faq.html#_should_i_prefer_chrony_over_timesyncd_if_i_do_not_need_to_run_a_server

reenable systemd-timesyncd

ONLY IF CHRONY DOES NOT WORK

To configure systemd-timesyncd, set "NTP=" in /etc/systemd/timesyncd.conf 

apt remove chrony
cat /etc/systemd/timesyncd.conf
systemctl enable systemd-timesyncd.service
systemctl restart systemd-timesyncd.service
systemctl status systemd-timesyncd.service
timedatectl status
timedatectl timesync-status

enable outgoing email (debian 11)

this is different from ubuntu 20. it uses /etc/mailname and it hardwires the hostname into main.cf.

enable outgoing email

we have an unusual email configuration. outgoing email should work to deliver error messages, notices, etc. incoming email is disabled, we do not receive email for local users.

this causes problems with TRIUMF smtp server. if our message cannot be delivered (wrong email address or receipient computer is turned off), TRIUMF smtp server will generate a delivery failure notification email and try to send it to the "from" address of the failed message. but the "from" address does not receive any email, so another delivery failure notification email is generated and an attempt to deliver it. which again fails, rinse and repeat.

as solution, kray created a special rule, email from scrap.triumf.ca does not generate delivery failure notices. failed messages sit in the queue for 5 days, then they are deleted. (K.O. - confirmed with kray 3jan2024).

to make this work we use the msmtp MTA package. 

cd ~
apt -y remove postfix
apt -y purge postfix # remove old config files
apt -y install mailutils msmtp msmtp-mta # say "no" to apparmor support
apt -y install bsd-mailx
cd ~/git/scripts/etc
git pull
/bin/cp -fv aliases /etc/aliases
/bin/cp -fv msmtprc /etc/msmtprc
/bin/rm -vf ~root/.forward
/bin/rm -vf /etc/mailname
Mail root
Subject: test
test
^D
CC: <CR>

enable outgoing email (postfix)

THIS IS OBSOLETE!!!

  • TRIUMF: use smtp.triumf.ca
  • CERN: use cernmx.cern.ch
apt install postfix ### select "satellite system", enter full hostname "xxx.triumf.ca", enter "smtp.triumf.ca"
apt install mailutils
dpkg-reconfigure postfix ### (if postfix already installed)

echo olchansk@triumf.ca lindner@triumf.ca bsmith@triumf.ca >> ~root/.forward
mailx root
test
^D

enable ping for all users (debian 11)

Without this tweak, Debian will report "operation not permitted" if a user tries to ping somewhere. 

echo 'net.ipv4.ping_group_range = 0 1000' > /etc/sysctl.d/99-ping.conf

disable apparmor

On NFS-Root network booted machines!

If "man man" returns "permission denied" and syslog reports apparmor "sendmsg DENIED" errors, disable apparmor. This is supposedly fixed in kernel 6.0 and later (to be confirmed), see https://bugs.launchpad.net/ubuntu/+source/apparmor/+bug/1784499

Disable apparmor, see https://ubuntu.com/server/docs/security-apparmor

This takes effect after a reboot. 

systemctl stop apparmor.service
systemctl disable apparmor.service

install missing packages

(apt eats terminal input, even the "yes |" trick does not quite work, repeat the following commands until they report that everything is installed) 

yes | apt -y install ssh tcsh ethtool ncat rsync strace net-tools sysstat smartmontools lm-sensors traceroute time minicom screen git lsof debsums tmux iptables
yes | apt -y install lsb-release
yes | apt -y install flex bison
yes | apt -y install neofetch
yes | apt -y install snmp snmp-mibs-downloader
yes | apt -y install git subversion g++ gfortran cmake doxygen
yes | apt -y install curl libcurl4 libcurl4-openssl-dev
yes | apt -y install mariadb-client ### mysql client
yes | apt -y install libz-dev libzstd-dev sqlite3 libsqlite3-dev unixodbc-dev
yes | apt -y install libssl-dev
yes | apt -y install emacs xemacs21 joe
yes | apt -y install gnuplot dos2unix
yes | apt -y install mutt bsd-mailx # email clients
yes | apt -y install liblz4-tool pbzip2
yes | apt -y install libc6-dev-i386 # otherwise no /usr/include/sys/types.h
yes | apt -y install libreadline-dev
yes | apt -y install ubuntu-mate-themes
yes | apt -y install libmotif-dev libxmu-dev
yes | apt -y install libusb-dev libusb-1.0-0-dev
yes | apt -y install i2c-tools libi2c-dev libi2c0
yes | apt -y install xfig gsfonts-x11 gsfonts-other # install fonts for xfig
yes | apt -y install libjson-perl
yes | apt -y install libgsl-dev # additional GNU Scientific Library
yes | apt -y install qt5-default # Qt development
yes | apt -y install python3-full python3-dev python3-dbg python3-pip ### for pyROOT
yes | apt -y install imagemagick imagemagick-common ckeditor # for elog
yes | apt -y install libjpeg-dev libjpeg-progs libjpeg-tools
yes | apt -y install linux-tools-common linux-tools-generic # cpupower frequency-info
yes | apt -y install rdesktop remmina remmina-plugin"*" # requested by POL
yes | apt -y install nlohmann-json3-dev # required to build MIDAS with ROOT 6.30 on Ubuntu-22
yes | apt -y install dpkg-dev cmake g++ gcc binutils libx11-dev libxpm-dev libxft-dev libxext-dev python3 libssl-dev libafterimage0 # from https://root.cern/install/dependencies/
yes | apt -y install apt install gfortran libpcre3-dev xlibmesa-glu-dev libglew-dev libftgl-dev libmysqlclient-dev libfftw3-dev libcfitsio-dev graphviz-dev libavahi-compat-libdnssd-dev libldap2-dev python3-dev python3-numpy libxml2-dev libkrb5-dev libgsl0-dev qtwebengine5-dev nlohmann-json3-dev # from https://root.cern/install/dependencies/

Ubuntu LTS 20.04: 

yes | apt -y install linux-image-generic-hwe-20.04 linux-tools-virtual-hwe-20.04 # enable linux 5.11 series kernel

Ubuntu LTS 22.04: 

apt -y install linux-generic-hwe-22.04 # enable linux 6.2.0 series kernel

disable swap (debian 11)

  • on 64 GB RAM machines swap is not useful
  • on machines booted from network (NFS-ROOT), swap does not work
  • on machines running from flash (RPi, etc), flash is too slow for useful swap
  • swap configured by linux installers invariably has wrong size and is not useful
systemctl disable dphys-swapfile
systemctl stop dphys-swapfile
dphys-swapfile uninstall

configure DNS

cd ~/git/scripts
git pull
mkdir /etc/systemd/resolved.conf.d
cp etc/resolved-triumf.conf /etc/systemd/resolved.conf.d/
systemctl restart systemd-resolved
resolvectl
#systemd-analyze cat-config systemd/resolved.conf

install ganglia

apt -y install ganglia-monitor
cd ~root/git/scripts/ganglia
git pull
make install
./ganglia-all.perl

install gonodeinfo

yes | apt-get -y install golang
mkdir ~/git
cd ~/git
#git clone https://bitbucket.org/dd1/gonodeinfo.git
git clone https://daq00.triumf.ca/~olchansk/git/gonodeinfo.git
cd gonodeinfo
git pull
make
make install # install gonodeinfo agent
cd ~ # this is important
  • edit /etc/gonodeinfo.conf
  • change "Description", "Location", "User" and "Administrator" as appropriate (or delete them)
  • change "Servers" to read: Servers: daq00.triumf.ca:8601
  • run "gonodeinfo -v"
  • if error is "connection refused". go to the nodeinfo server to add this client to the access control list:
  • on the gonodeinfo server: run /opt/gonodeinfo/gonodereceive.exe -a daq13
  • try gonodeinfo again, there should be no error
  • on the gonodeinfo server: run gonodereport, look at the web pages, the new machine should be listed now

install fonts for EPICS

  • apt install xfonts-100dpi xfonts-75dpi
  • restart Xorg (i.e. "killall Xorg", this will log you out from the console)
  • xlsfonts | grep -i helvetica ### should show fonts with different sizes, not just size 0 (scalable)

install libz.so.1 for CentOS compatibility

KO - confirm which versions on quartus need this. 

yes | apt-get -y install zlib1g
yes | apt-get -y install zlib1g:i386 libc6:i386 libgcc1:i386 gcc-6-base:i386

install libpng12.so.0 for Quartus compatibility

(does not work anymore!!!) 

wget http://ftp.ca.debian.org/debian/pool/main/libp/libpng/libpng12-0_1.2.50-2+deb8u2_amd64.deb
dpkg --install libpng12-0_1.2.50-2+deb8u2_amd64.deb

install libpng12.so.0 for Quartus 13.0sp1

wget https://daq00.triumf.ca/~olchansk/linux/libpng12.so.0
wget https://daq00.triumf.ca/~olchansk/linux/libpng12.so.0.50.0
/bin/cp -pv libpng12.so.0 libpng12.so.0.50.0 /lib/x86_64-linux-gnu/

install packages for Xilinx

ubuntu LTS 22.04 vivado 2020.1 

apt install autoconf libtool
apt install libtinfo5
apt install texinfo
apt install zlib1g:i386

install packages for building ROOT

apt -y install libx11-dev libxpm-dev libxft-dev libxext-dev libpng-dev libjpeg-dev xlibmesa-glu-dev libxml2-dev libgsl-dev cmake

install 32-bit libraries for PHYSICA

these instructions are for running 32-bit physica executable built for SL6 on ubuntu LTS 20.04

install physica sources (cannot build, do not have g77) 

cd ~/packages
git clone https://bitbucket.org/ttriumfdaq/physica.git

install 32-bit libraries using ubuntu package manager: 

apt install lib32z1 # libz.so

copy 32-bit SL6 shared libraries to /lib32 

root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libX11.so.6 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libgd.so.2 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libpng12.so.0 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libreadline.so.6 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libncurses.so.5 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libg2c.so.0 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libxcb.so.1 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libXpm.so.4 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libjpeg.so.62 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libfontconfig.so.1 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libfreetype.so.6 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libtinfo.so.5 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libXau.so.6 /lib32/
root@trinatdaq:~# cp /daq/daqstore/olchansk/daq/physica-SL6/libexpat.so.1 /lib32/

ldd should report: 

trinatdaq:trinat> ldd /usr/local/physica/physica.exe
	linux-gate.so.1 (0xf7fa2000)
	libX11.so.6 => /lib32/libX11.so.6 (0xf7e43000)
	libgd.so.2 => /lib32/libgd.so.2 (0xf7dfe000)
	libpng12.so.0 => /lib32/libpng12.so.0 (0xf7dd6000)
	libz.so.1 => /lib32/libz.so.1 (0xf7db8000)
	libreadline.so.6 => /lib32/libreadline.so.6 (0xf7d7e000)
	libncurses.so.5 => /lib32/libncurses.so.5 (0xf7d5b000)
	libg2c.so.0 => /lib32/libg2c.so.0 (0xf7d3d000)
	libm.so.6 => /lib32/libm.so.6 (0xf7c39000)
	libgcc_s.so.1 => /lib32/libgcc_s.so.1 (0xf7c1a000)
	libc.so.6 => /lib32/libc.so.6 (0xf7a2f000)
	libxcb.so.1 => /lib32/libxcb.so.1 (0xf7a05000)
	libdl.so.2 => /lib32/libdl.so.2 (0xf79ff000)
	libXpm.so.4 => /lib32/libXpm.so.4 (0xf79ee000)
	libjpeg.so.62 => /lib32/libjpeg.so.62 (0xf7997000)
	libfontconfig.so.1 => /lib32/libfontconfig.so.1 (0xf7962000)
	libfreetype.so.6 => /lib32/libfreetype.so.6 (0xf78c9000)
	libtinfo.so.5 => /lib32/libtinfo.so.5 (0xf78b0000)
	/lib/ld-linux.so.2 (0xf7fa4000)
	libXau.so.6 => /lib32/libXau.so.6 (0xf78ad000)
	libexpat.so.1 => /lib32/libexpat.so.1 (0xf7885000)
trinatdaq:trinat>

set login environment: 

setenv TRIUMF_FONTS $HOME/packages/physica/fonts
setenv PHYSICA_DIR $HOME/packages/physica
alias physica $PHYSICA_DIR/physica-SL6-32

test: 

cd ~/packages/physica
physica
@rangauss.pcm

install lightdm

unlike the default gdm login manager, lightdm shows the machine hostname and does not require an extra mouse click to swicth from screen saver to login mode. 

apt -y install lightdm
# select lightdm

install desktop environments

note: default display manager and default desktop are deficient, please do not skip this step.

note: if apt asks to choose the display manager, select "lightdm"

note: KO - I recommend the "MATE" desktop.

note: you will have to cut-and-paste this several times because "apt" eats commands, even with "-y" and even piped from "yes". 

# install MATE desktop
DEBIAN_FRONTEND=noninteractive apt -y install ubuntu-mate-core ubuntu-mate-desktop ubuntu-mate-themes
# install Cinnamon desktop
DEBIAN_FRONTEND=noninteractive apt -y install cinnamon
# install KDE desktop
DEBIAN_FRONTEND=noninteractive apt -y install kubuntu-desktop
# install Lxqt desktop
DEBIAN_FRONTEND=noninteractive apt -y install lxqt
# install Xfce4 desktop
DEBIAN_FRONTEND=noninteractive apt -y install xfce4

install ROOT

Please install ROOT per instructions at https://root.cern.ch.

NOTE1: The ROOT package available from Ubuntu repositories is severely out of date and cannot be used with MIDAS and ROOTANA. ### DO NOT DO THIS! apt-get install root-system

NOTE2: as of 2017-Jan-09, ROOT binary kits for Ubuntu do not work (use GCC 5 instead of GCC6), build from source instead.

Install x2go

KO - is this still needed? does it cause any security problems?

x2go instructions, thanks to Art O. 

add-apt-repository ppa:x2go/stable
apt-get update
apt-get install x2goserver x2goserver-xsession

enable root login from ladd00/daq00

ssh localhost
CTRL-C
/bin/cp ~root/git/scripts/etc/authorized_keys ~root/.ssh/

disable ssh access from outside of TRIUMF

to stop ssh login spam, disable ssh access from outside of TRIUMF. this can be done by requesting a firewall block through the helpdesk or by local firewall rule: 

echo iptables -I INPUT ! -s 142.90.0.0/255.255.0.0 -p tcp --dport 22 -j REJECT >> /etc/rc.local
/etc/rc.local

install smart-status

ln -s ~/git/scripts/smart-status/smart-status.perl ~root/

enable boot menu and boot messages

This will enable the grub menu (with a 10 sec timeout) and replace black screen with exciting linux boot messages.

  • emacs -nw /etc/default/grub
GRUB_DEFAULT=0
#GRUB_TIMEOUT_STYLE=hidden
GRUB_TIMEOUT=10
GRUB_DISTRIBUTOR=`lsb_release -i -s 2> /dev/null || echo Debian`
#GRUB_CMDLINE_LINUX_DEFAULT="vga=769 video=640x480"
GRUB_CMDLINE_LINUX_DEFAULT=""
GRUB_CMDLINE_LINUX=""
#GRUB_GFXMODE=640x480
  • update grub config:
grub-mkconfig -o /boot/grub/grub.cfg

reboot

this completes installation of the base system.

following sections modify basic ubuntu to fix known problems and to enable special stuff.

Enable automatic updates

apt install unattended-upgrades
cd ~/git/scripts
git pull
/bin/cp -v etc/99apt-conf-ko /etc/apt/apt.conf.d/
apt-config dump | grep Unattended

Following is obsolete:

  • emacs -nw /etc/apt/apt.conf.d/50unattended-upgrades
    • uncomment in Allowed-Origins "-security" and "-updates"
    • add in Allowed-Origins: "Google LLC:stable";
    • uncomment/add: "Unattended-Upgrade::Mail "root";
  • emacs -nw /etc/apt/apt.conf.d/10periodic
APT::Periodic::Update-Package-Lists "1";
APT::Periodic::Download-Upgradeable-Packages "1";
APT::Periodic::AutocleanInterval "7";
APT::Periodic::Unattended-Upgrade "1";
  • test: unattended-upgrade --dry-run -v

NOTE: update-on-shutdown is disabled.

NOTE: there is no update-on-boot, but:

NOTE: if machine was off for a long time, the systemd update timer would have expired and it will fire soon after reboot, causing an automatic update run. this is unwanted, and there is no fix or workaround for it. K.O. June-2023.

Fix bpool is full (obsolete)

THIS IS CAUSED BY OBSOLETE PACKAGE zsys. PLEASE: apt remove zsys

!!! only if ROOT on ZFS !!!

There is an error in the zsys package that causes bpool to run out of space, see #Ubuntu zsys for more details.

To fix: 

cd ~/git/scripts
git pull
cp etc/zsys.conf /etc/
zsysctl service reload
zsysctl service gc
zpool list bpool
zfs list bpool
df /boot

IPMI instructions

IPMI is the board management hardware on Supermicro and other server motherboards. This includes hardware sensors - fan rotation speed, temperatures and power supply voltages. 

apt-get install ipmitool
systemctl enable ipmievd
systemctl restart ipmievd

Run:

  • ipmitool sel list ### event list
  • ipmitool sel elist ### event list
  • ipmitool sel clear ### clear event list (if it becomes full)
  • ipmitool sensor ### report hardware sensors

move /home/wheel

note: this MUST be done if ZFS root and NIS/autofs with /home.

Default location of wheel's home directory will collide with autofs /home, it has to be moved, for example to /wheel. 

# logout from the wheel user
# go to another computer
ssh root@daqubuntuxxx
zfs list | grep wheel ### identify zfs name wheel_xxxxxx
zfs set mountpoint=/wheel rpool/USERDATA/wheel_hm8fzh
emacs -nw /etc/passwd ### change wheel's home directory from /home/wheel to /wheel
su - wheel ### check that user wheel still works

This will break wheel's ability to run snap programs, such as firefox, install chrome as listed below.

enable NIS (ubuntu 22.04, debian 11)

apt -y install rpcbind nis
echo DAQ-NIS >> /etc/defaultdomain
echo ypserver daq00.triumf.ca >> /etc/yp.conf
systemctl enable ypbind.service
systemctl restart ypbind.service
systemctl status ypbind.service
ypwhich -m

enable ypserv: 

sed -i s/NISSERVER=false/NISSERVER=slave/ /etc/default/nis
/usr/lib/yp/ypinit -s daq00
echo ypserver localhost >> /etc/yp.conf
sed -i "s/ypserver .*/ypserver localhost/" /etc/yp.conf
systemctl enable ypserv
systemctl restart ypserv
systemctl restart ypbind

edit /etc/nsswitch.conf to read: 

# begin get data from nis
passwd: files nis
group: files nis
shadow: files nis
automount:  files nis
netgroup: files nis
# end get data from nis

enable hourly update of nis maps: 

mkdir ~root/git
cd ~root/git
git clone http://daq00.triumf.ca/~olchansk/git/scripts.git
cd ~/git/scripts/etc
git pull
ln -s $PWD/ypxfr-cron-hourly /etc/cron.hourly

If this is a new machine, then on the master NIS node (daq00), add this new node to /etc/netgroup, and update NIS maps (cd /var/yp; make)

enable NIS (ubuntu 20.04)

  • apt-get -y install portmap nis ### will ask for NIS domain (DAQ-NIS)
  • dpkg-reconfigure nis ### reconfigure if already installed
  • ypwhich -m
  • edit /etc/default/nis
    • set "NISSERVER=slave"
    • Ubuntu LTS 20.04, check that "YPBINDARGS=" is blank, remove "-no-dbus" if it is there
  • #edit /etc/yp.conf, comment-out everything, add "domain DAQ-NIS server localhost"
  • edit /etc/yp.conf, comment-out everything, add "ypserver localhost"
  • /usr/lib/yp/ypinit -s daq00
  • systemctl enable nis
  • systemctl restart nis
  • ypwhich
  • ypwhich -m
  • ypcat -k passwd
  • vi /etc/nsswitch.conf ### add the automount line, modify the passwd, group and shadow lines to read this:
# begin get data from nis
passwd: files nis
group: files nis
shadow: files nis
automount:  files nis
netgroup: files nis
# end get data from nis
  • enable hourly update of NIS maps
mkdir ~root/git
cd ~root/git
git clone https://daq00.triumf.ca/~olchansk/git/scripts.git
cd ~/git/scripts/etc
git pull
ln -s $PWD/ypxfr-cron-hourly /etc/cron.hourly
  • ### NOT NEEDED sudo vi /etc/idmapd.conf ### add line: "Domain = triumf.ca"

enable autofs

apt -y install autofs
systemctl enable autofs
systemctl restart autofs
ls -l /home/olchansk ### test autofs, check file owner is correct

enable NFS server

apt install nfs-kernel-server
#edit /etc/exports
systemctl enable nfs-server
systemctl restart nfs-server

NIS master

notes for setting up the NIS master

wheel user

"wheel" is the default administrative user. We do not want it's password exported to NIS (encrypted password hash is world visible) and we do not want it's home directory exported to NFS (~wheel/.ssh is world visible and potentially writable: anybody can change ~wheel/.ssh/authorized_keys).

  • move wheel's home directory from /home/wheel to /wheel (see special section about this)
  • change wheel's UID and GID from 1000 to a value below MINUID in /var/yp/Makefile

coherent uids

we do not want system accounts defined in /etc/passwd of the NIS master to be included in the NIS map "passwd". this causes trouble on NIS clients where newly installed packages fail to create local system users because same user already exists in NIS.

This is controlled by MINUID in /var/yp/Makefile.

Historical TRIUMF uids start from around 200, but several clusters do not have any historic TRIUMF uids below 500 and MINUID is set to:

  • DAQ-NIS: MINUID=200
  • ISAC-NIS: MINUID=500
  • TITAN-NIS: MINUID=500
  • MUSR-NIS: MINUID=500
  • TIG-NIS: MINUID=500 (100 on SL6 mother8pi)

Ubuntu 20 has two programs to create users:

  • adduser - creates new users with UID 1000 and up as specified in /etc/adduser.conf. No problems here.
  • adduser --system - creates new system users with UID 100 and up as specified in /etc/adduser.conf. No problems here.
  • useradd - creates new users with UID 1000 and up as specified in /etc/login.defs. No problems here.
  • useradd --system - creates new system users with UID 999 and down (read "man useradd", section at the end about SYS_UID_MAX). This collides with NIS MINUID, these system users will be included in the NIS map and cause trouble.

This problem cannot be fixed, SYS_UID_MIN, SYS_UID_MAX and UID_MIN in /etc/login.defs do not seem to have any effect on UIDs chosen by "useradd --system". (tested on Ubuntu LTS 20.04).

So far only these system accounts seem to be affected by this:

  • systemd-coredump
  • ganglia

To fix:

  • run "sort -r -n -t: -k3 /etc/passwd" to identify the last unused system user uid (range 100..200)
  • run "sort -r -n -t: -k3 /etc/group" to identify the last unused system user gid (range 100.200)
  • systemd-coredump: manually change UID and GID (package systemd-coredump is usually not installed)
  • ganglia: same thing, then change ownership on all ganglia files.

Also read systemd author's opinion on system vs user UIDs: https://github.com/systemd/systemd/issues/4850#issuecomment-265698275

Fix systemd-logind NIS breakage

!!! THIS IS NOT NEEDED FOR UBUNTU LTS 20.04 !!!

there is a delay in ssh logins for normal users. "ssh -v" shows the delay is after "pledge...". this fix removes the delay.

systemd developers think that we should not use NIS and made sure there are problems if we do. To give them credit, they do offer a workaround. Read this: https://github.com/poettering/systemd/commit/695fe4078f0df6564a1be1c4a6a9e8a640d23b67 

mkdir /etc/systemd/system/systemd-logind.service.d
echo -e "[Service]\nIPAddressDeny=\n" > /etc/systemd/system/systemd-logind.service.d/local.conf
systemctl daemon-reload
systemctl cat systemd-logind.service

Fix systemd-udevd NIS breakage

see same problem as above with udev getting stuck. ubuntu lts 20.04. 

mkdir /etc/systemd/system/systemd-udevd.service.d
echo -e "[Service]\nIPAddressDeny=\n" > /etc/systemd/system/systemd-udevd.service.d/local.conf
systemctl daemon-reload
systemctl cat systemd-udevd.service

Configure USB device permissions

Configure USB device permissions for user access to USB-serial devices, Altera USB Blaster, etc.

  • create file /etc/udev/rules.d/99-usb-chmod.rules with this contents:
emacs -nw /etc/udev/rules.d/99-usb-chmod.rules
ACTION=="add", SUBSYSTEM=="usbmisc", RUN+="/bin/chmod a+wr $env{DEVNAME}" 
ACTION=="add", SUBSYSTEM=="usb_device", RUN+="/bin/chmod a+wr /dev/%c"
ACTION=="add", SUBSYSTEM=="usb_device", RUN+="/bin/chmod a+wr /proc/%c"
ACTION=="add", ENV{DEVTYPE}=="usb_device", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", ENV{DEVTYPE}=="usb_device", RUN+="/bin/chmod a+wr $env{DEVICE}"
ACTION=="add", ENV{PHYSDEVBUS}=="usb-serial", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", ENV{DEVPATH}=="/class/tty/ttyS*", RUN+="/bin/chmod a+wr $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyUSB*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyACM*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", SUBSYSTEM=="tty", DEVPATH=="*ttyS*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
ACTION=="add", DEVPATH=="*video*", RUN+="/bin/chmod a+rw $env{DEVNAME}"
  • reload udev rules: udevadm control --reload-rules
  • apply new permissions: udevadm trigger --action=add
  • watch udev activity: udevadm monitor -p

Configure lightdm display manager

  • enable it
echo lightdm | dpkg-reconfigure -fteletype lightdm
systemctl disable gdm
systemctl disable sddm
systemctl enable lightdm
  • make the MATE desktop as default
cd ~root/git/scripts/
git pull
/bin/cp -v etc/lightdm_default_mate.conf /etc/lightdm/lightdm.conf.d/
  • enable login by NIS users
/bin/cp -v etc/lightdm_enable_nis_login.conf /etc/lightdm/lightdm.conf.d/
  • restart lightdm
systemctl stop gdm
systemctl restart lightdm

Install libpng12.so.0

Quartus 16 needs libpng12: 

wget http://mirrors.kernel.org/ubuntu/pool/main/libp/libpng/libpng12-0_1.2.54-1ubuntu1_amd64.deb
dpkg --install libpng12-0_1.2.54-1ubuntu1_amd64.deb

Install google-chrome

wget https://dl.google.com/linux/direct/google-chrome-stable_current_amd64.deb
dpkg -i google-chrome-stable_current_amd64.deb

confirm autoupdate is enabled, observe dl.google.com is present in the list of repositories: 

apt update
...
Get:5 https://dl.google.com/linux/chrome/deb stable/main amd64 Packages [1,094 B]
...

FOLLOWING IS OBSOLETE:

Instructions from here: https://www.ubuntuupdates.org/ppa/google_chrome?dist=stable 

wget -q -O - https://dl-ssl.google.com/linux/linux_signing_key.pub | apt-key add -
sh -c 'echo "deb [arch=amd64] http://dl.google.com/linux/chrome/deb/ stable main" >> /etc/apt/sources.list.d/google-tmp.list'
apt update
apt install google-chrome-stable
/bin/rm -f /etc/apt/sources.list.d/google-tmp.list

Install amanda client

ONLY ONE MACHINES THAT HOST HOME DIRECTORIES

  • apt install amanda-client
  • edit /etc/amandahosts
amanda.triumf.ca amanda amdump
  • check permissions on /etc/amandahosts:
root@daq00:/var/log/amanda# ls -l /etc/amandahosts
-rw------- 1 backup backup 49 Jan 27 10:48 /etc/amandahosts
  • fix if needed: chown backup.backup /etc/amandahosts; chmod a= /etc/amandahosts; chmod u=wr /etc/amandahosts
  • edit /etc/amanda-security.conf, add this line:
runtar:gnutar_path=/usr/bin/tar

On the amanda machine:

  • in amanda disklist, use dump type "bsdtcp-comp-user-tar"
  • su - amanda and run amcheck -c daily daq00
-bash-4.1$ amcheck -c daily daq00

Amanda Backup Client Hosts Check
--------------------------------
Client check: 1 host checked in 0.092 seconds.  0 problems found.

(brought to you by Amanda 3.3.7p1.git.685ff76d)

Enable rc.local

For reasons unknown, Ubuntu LTS 20.04 does not enable /etc/rc.local. Do this: 

cd ~/git/scripts
git pull
cp -n -v etc/rc.local /etc/
chmod a+rx /etc/rc.local
cp etc/rc-local.service /etc/systemd/system/
systemctl daemon-reload
systemctl enable rc-local
systemctl start rc-local
systemctl status rc-local

Remove unwanted packages

apt remove zsys # broken, do not use
apt remove sddm # login manager
apt remove avahi-daemon avahi-autoipd # not sure what it does, observed using 100% CPU
apt remove modemmanager # probes all serial ports to see if it's a modem

Disable unwanted services

systemctl disable mpd
systemctl disable snapd
systemctl disable ModemManager
systemctl --global mask tracker-extract-3.service
systemctl --global mask tracker-miner-fs-3.service
systemctl daemon-reload

Disable sleep and suspend

note: we see some computers randomly shutdown or go to sleep, log files indicates the "sleep" or "suspend" button was pushed by user, but no such buttons actually exist. this is the fix for this: 

systemctl mask sleep.target suspend.target hibernate.target hybrid-sleep.target systemd-suspend.service systemd-hybrid-sleep.service

Enable crontab @reboot for MIDAS

startup scripts have a bug - cron @reboot entries for normal users can run before autofs is ready, so if the home directory is on autofs/NFS, it cannot be accessed and the cron job fails. If MIDAS is supposed to be started by cron @reboot, it will not start (there *will* be an error message in /var/log/cron). 

mkdir /etc/systemd/system/cron.service.d
echo -e "[Unit]\nAfter=ypbind.service autofs.service\n" > /etc/systemd/system/cron.service.d/local.conf
systemctl daemon-reload
systemctl cat cron.service

Explore the systemd dependency tree using "systemctl list-dependencies" maybe with "--all".

Visualize the exact boot sequence from previous boot: "systemd-analyze plot > xxx.svg", look at the svg file using a web browser.

Crontab entry to start midas: (install in the midas user crontab, not root crontab) 

su - midasuser
crontab -l
#@reboot /bin/bash -l -c "/home/trinat/bin/start-daq-applications"
#@reboot /bin/tcsh -c "/home/trinat/bin/start-daq-applications"

Install apache httpd proxy for midas and elog

This will configure the HTTPS/SSL certificate using "certbot" and "letsencrypt" and configure an HTTPS web server using apache2.

First, configure apache2:

  • execute these commands:
apt -y install apache2
cd /etc/apache2
  • create new file conf-available/ssl-daq14.conf # use actual hostname instead of daq14
SSLSessionCache         shmcb:/run/httpd/sslcache(512000)
SSLSessionCacheTimeout  300
SSLRandomSeed startup file:/dev/urandom  256
SSLRandomSeed connect builtin
SSLCryptoDevice builtin
  • create new file sites-available/daq14-ssl.conf # use actual hostname instead of daq14
<IfModule mod_ssl.c>
    <VirtualHost *:443>
        ServerName daq14.triumf.ca
        DocumentRoot /var/www/html
        ErrorLog /var/log/apache2/daq14.log
        SSLEngine on
        # note SSLProtocol, SSLCipherSuite and some other settings are overwritten by /etc/letsencrypt/options-ssl-apache.conf
        SSLProtocol all -SSLv2 -SSLv3 -TLSv1 -TLSv1.1
        SSLCipherSuite HIGH:MEDIUM:!aNULL:!MD5:!SEED:!IDEA:!RC4
        ## use port specified in elogd.cfg
        #ProxyPass /elog/ http://localhost:8082/ retry=1 
        ## use mhttpd port
        #ProxyPass /      http://localhost:8080/ retry=1 
        Header always set Strict-Transport-Security "max-age=31536000; includeSubDomains"
        <Location />
            SSLRequireSSL
            AuthType Basic
            AuthName "DAQ password protected site"
            Require valid-user
            # create password file: touch /etc/apache2/htpasswd
            # to add new user or change password: htpasswd /etc/apache2/htpasswd username
            AuthUserFile /etc/apache2/htpasswd
        </Location>
    </VirtualHost>
</IfModule>
  • stop apache2 from listening on port 80: edit /etc/apache2/ports.conf, comment-out the line "Listen 80"
  • stop apache2 from listening on port 80: edit /etc/apache2/ports.conf, comment-out the line "Listen 80"
  • enable ssl module
  • enable new configurations
a2enmod ssl
a2enmod headers
a2enmod proxy
a2enmod proxy_http
a2enconf ssl-daq14
a2ensite daq14-ssl
  • disable default ssl sites
a2dissite 000-default-le-ssl
a2dissite 000-default
ls -l /etc/apache2/sites-enabled/ ### should show only daq14-ssl.conf
  • check that there are no syntax problems
apache2ctl configtest
  • enable and start apache2:
systemctl enable apache2
systemctl restart apache2
systemctl status apache2
  • apache2 may fail to start, look in /var/log/apache2/error.log and /var/log/apache2/daq14.log
  • if it says "Failed to configure ... certificate", proceed to the step for setting certbot.
  • try to access https://daq14.triumf.ca
    • you should see a complaint about self-signed certificate
    • you should see a request for password (do not login yet)
    • if you get "connection refused", HTTPS port 443 may need to be enabled in the local firewall, look at documentation for ufw.

Second, configure certbot:

(Note: as of 2018-01-18 certbot requires use of http port 80 to get the initial https certificate, renewal can continue to use the https port 443)

(Note: as of 2019-01-?? certbot requires use of port 80 for renewals)

(Note: unsurprisingly, this requires outside access to connect with letsencrypt, so won't work if PC is only accessible from on-site network)

  • check that port 80 is not used by anything:
  • netstat -an | grep LISTEN | grep ^tcp | grep 80
  • lsof -P | grep -i tcp | grep LISTEN | grep 80
  • if lsof reports that apache2 is listening on port 80, follow the apache2 instructions above (remove "listen 80" from apache2.conf
  • install certbot (if necessary open tcp port 80 in the firewall, see documentation for ufw):
apt install certbot python3-certbot-apache
certbot certonly --standalone --installer apache
  • then answer questions:
  • "activate HTTPS for daq14.triumf.ca" - say ok
  • "enter email address" - enter your own email address
  • "please read terms..." - read the terms and say "agree"
  • it will take a few moments...
  • "congratulations..." - say ok.
certbot install --apache --cert-name daq14.triumf.ca
  • then answer questions:
  • "choose redirect..." - say "1" (no redirect)
  • look inside /etc/apache2/sites-enabled/daq14-ssl.conf to see that SSLCertificateFile & co point to certbot certificates in

/etc/letsencrypt/live/daq14.triumf.ca/

  • to check current renewal and to update the certbot config file in /etc/letsencrypt/renewal, run this:
certbot renew --standalone --installer apache --force-renewal

NOTE: this certificate will expire in 3 months, automatic renewal should work with current version of certbot

Third, activate password protection:

  • as shown in the config file above, create password file and initial user: (replace "midas" with specific username)
touch /etc/apache2/htpasswd
htpasswd /etc/apache2/htpasswd midas
  • restart apache2
systemctl restart apache2
systemctl status apache2

From here:

  • enable proxy for MIDAS mhttpd - uncomment redirect in the config file above
  • enable proxy for ELOG - ditto
a2enmod proxy
a2enmod proxy_http
apache2ctl configtest
systemctl restart apache2

SSL                  = 0

NOTE: if certbot fails with errors about 'module' object has no attribute 'pyopenssl', try this: pip install requests==2.6.0

Enable elog PDF preview

see https://stackoverflow.com/questions/52998331/imagemagick-security-policy-pdf-blocking-conversion

  • xemacs -nw /etc/ImageMagick-6/policy.xml
  • remove this section at the end:
<!-- disable ghostscript format types -->
<policy domain="coder" rights="none" pattern="PS" />
<policy domain="coder" rights="none" pattern="PS2" />
<policy domain="coder" rights="none" pattern="PS3" />
<policy domain="coder" rights="none" pattern="EPS" />
<policy domain="coder" rights="none" pattern="PDF" />
<policy domain="coder" rights="none" pattern="XPS" />

Install Jupyter notebook

From https://jupyter.org/install
apt install python3-pip
pip install jupyterlab
pip install notebook
~/.local/bin/jupyter notebook
watch the http://localhost:8888 URL that it printed
say "no" to offer to start firefox (it will not work!)
URL is: http://localhost:8888/tree?token=xxx
from the machine where you are running the web browser (i.e. google-chrome), run (replace trinat@trinatdaq with the username and machine name where you started jupyter)
open a new shell and run: ssh -v trinat@trinatdaq -L 8888:localhost:8888
in the web browser, open http://localhost:8888
this gives us the login page
in the password or token entry field, put the token from the "tree?token=xxx" above (printed by jupyter on startup)
push button "login"
jupyter page should open with the list of files in the trinat home directory
congratulate Brian with full success

Install ZFS quota report

If there are any ZFS volumes, install script to report disk and quota usage 

cd ~/git/scripts/quotareport
git pull
mkdir /var/www/html/zfsquotareport
cp -pv ~/git/scripts/quotareport/sorttable.js /var/www/html/zfsquotareport/
ln -s $PWD/zfsquotareport.perl /etc/cron.daily/
touch /etc/crontab

If httpd is configured to redirect "/" to MIDAS mhttpd:

  • add following to /etc/apache2/sites-enabled/xxx-ssl.conf in front of "ProxyPass / ..."
  • run "systemctl reload apache2"
## do not proxy zfs quota report directory 
ProxyPass /zfsquotareport/ !

Install PHP

  • apt install php libapache2-mod-php
  • systemctl restart apache2
  • create /var/www/html/info.php
<?php 
 
phpinfo();

Configure TRIUMF printers

systemctl stop cups
systemctl disable cups
echo "ServerName printers.triumf.ca" > /etc/cups/client.conf
lpstat -a

Enable core dumps

By default, Ubuntu LTS 20.04 installs the apport package which disabled core dumps from user applications. (google it up!). It is not meant to do this and documentation claims that it is not installed and not enabled by default. Oh, well... 

apt remove apport
apt autoremove ### will remove apport-symptoms and a few other packages

After this, core dumps are written to file "core" in the current directory. See /proc/sys/kernel/core_pattern and /proc/sys/kernel/core_uses_pid.

Enable core dump file names to include process id, add following to /etc/rc.local 

echo 1 > /proc/sys/kernel/core_uses_pid

Enable debugger

By default, Ubuntu LTS 20.04 does not permit debugger to attach and debug already running programs. To enable it, add following to /etc/rc.local 

echo 0 > /proc/sys/kernel/yama/ptrace_scope

Disable Ubuntu Pro nag

If "apt upgrade" requests Ubuntu Pro or esm-apps, disable the nag: 

/bin/rm /etc/apt/apt.conf.d/20apt-esm-hook.conf

Update packages

  • apt-get update # update package list
  • apt-get dist-upgrade # install updated packages and update "kept back" packages
  • apt-get autoremove # remove packages that apt thinks should be removed

Finish installation

Congratulations. There is nothing more to do!

  • reboot
shutdown -r now

Install ZFS

!!! after installing all the packages, after updating the system, after updating the linux kernel, after rebooting into latest kernel !!! 

apt-get install zfsutils-linux

Follow generic ZFS instructions: ZFS

Update to new version of Ubuntu

vi /etc/update-manager/release-upgrades # set "Prompt=normal"
do-release-upgrade

Update Ubuntu LTS 20.04 to LTS 22.04: 

apt remove zsys

daqubuntu

# reboot to clear out all updates
# vi /etc/update-manager/release-upgrades # set "Prompt=normal"
# do-release-upgrade -c
Checking for a new Ubuntu release
New release '22.04 LTS' available.
Run 'do-release-upgrade' to upgrade to it.
# do-release-upgrade
...
say yes...
...
login.defs, say "Y" (erase local changes, use packaged version)
/etc/systemd/resolved.conf, say "Y" (same as above)
firefox snap, say yes
unable to reach snap store, say "skip"
/etc/gmond.conf, say "Y"
/var/yp/Makefile, say "install the package maintainer's version"
/etc/ypserv.conf, same thing
/etc/ypserv.securenets, same thing
/etc/default/nis, same thing
/etc/speech-dispatcher/modules/mary-generic.conf, same thing
/etc/apt/apt.conf.d/50unattended-upgrades, same thing
...
278 packages are going to be removed, say yes
...
restart required, say yes
...
no ping... yes ping...
...
ssh daqubuntu, ok
apt update, fail, DNS does not work, "host security.ubuntu.com" does not resolve.
fix resolver per https://daq00.triumf.ca/DaqWiki/index.php/Ubuntu#Disable_NetworkManager
apt update, apt upgrade now works, 0 packages to update
NIS does not work.

midm9a

login.defs
firefox snap
gmond.conf
ypserv
/etc/default/nis
unattended-upgrades
amanda-security.conf
remove obsolete (no)
reboot
configure dns
reenable nis

daq17

firefox snap
imagemagick policy.xml
gmond.conf
chrony.conf
/var/yp/Makefile
ypserv.conf
ypserv.securenets
/etc/default/nis
50unattended-upgrades

daq00

per https://serverpilot.io/docs/how-to-upgrade-ubuntu-20.04-to-22.04/ 

do-release-upgrade -f DistUpgradeViewNonInteractive

if it exists "too soon" without doing anything, run it without "-f xxx", most likely it does not like something about this machine. in case of daq00 it did not like how the EFI partitions were mounted. after fixing it, non-interactive upgrade was successful.

isdaq08

  • prepare
cd ~/git/scripts
git pull
cd ~
apt -y install debsums
  • check for modified config files that make upgrade unhappy, deal with all files reported by debsums.
root@isdaq08:~# debsums -ce
/etc/ganglia/gmond.conf
/etc/yp.conf
/etc/apt/apt.conf.d/10periodic
root@isdaq08:~#
  • restore original /etc/apt/apt.conf.d/10periodic
APT::Periodic::Update-Package-Lists "1"; 
APT::Periodic::Download-Upgradeable-Packages "0"; 
APT::Periodic::AutocleanInterval "0";
  • apt remove ganglia-monitor
  • apt remove nis
  • "debsums -ce" is now empty

Run the upgrade:

  • do-release-upgrade -f DistUpgradeViewNonInteractive

Post upgrade:

  • configure DNS
  • apt -y install linux-generic-hwe-22.04
  • /bin/cp -v ~/git/scripts/etc/99apt-conf-ko /etc/apt/apt.conf.d/ # restore nightly updates
  • /bin/rm /etc/apt/apt.conf.d/20apt-esm-hook.conf # remove the ubuntu-pro nag
  • install missing packages
  • restore ganglia
  • restore nis
  • check zpool status, may need zpool upgrade
  • reboot

Upgrade to new version of Debian

https://www.debian.org/releases/bookworm/amd64/release-notes/ch-upgrading.en.html

32-bit VME processor Debian 11 to 12

  • cd git/scripts; git pull; cd ~
  • apt update
  • apt upgrade
  • edit /etc/apt/sources.list
deb http://deb.debian.org/debian/ bookworm main
#deb http://deb.debian.org/debian/ bullseye main
#deb-src http://deb.debian.org/debian/ bullseye main
  • apt update
  • apt upgrade --without-new-pkgs
  • apt full-upgrade
  • apt list '~c'; apt purge '~c' # purge left-over config files [residual-config]
  • reboot

Ubuntu package manager

  • apt-get install xxx # install package xxx
  • apt-get update
  • apt-get upgrade
  • apt-get dist-upgrade
  • apt-get autoremove # remove automatically installed packages required by a removed package
  • apt-get remove xxx # remove package xxx
  • apt-cache search . # list all available packages
  • apt-cache show "." | grep ^Package # list al available packages
  • apt-cache madison root-system # show all available versions of package root-system
  • apt list # list all installed packages
  • dpkg --listfiles libpng16-16 # list all files from this package
  • apt list --installed # list all installed packages
  • dpkg -S /bin/bash # what package provides this file?
  • dpkg -L bash # what files provided by this package?
  • debsums -ce # show modified config files
  • apt-config dump # show apt configuration

Ubuntu zsys

NOTE: DO NOT USE ZSYS, see https://github.com/ubuntu/zsys/issues/218 and https://github.com/ubuntu/zsys/issues/230

  • manual removal of old snapshots
zsysctl show
zsysctl state remove xy69ye -s
zsysctl state remove xy69ye
zsysctl state remove xy69ye -u wheel
  • apt remove zsys

NOTE: old zsys snapshots must be cleaned manually, "zsysctl state remove xxx --system" is broken and does not remove user data snapshots 

update-grub # list of all snapshots, errors if some snapshots are broken
zsysctl state remove lnc0k7 --system # remove snapshot
xemacs -nw /etc/zsys.conf; zsysctl service reload; zsysctl service gc # cause gc to run with new settings in zsys.conf
zfs list -r -t snapshot -o name,used,referenced,creation bpool/BOOT # list snapshots
zsysctl show # show snapshots

Ubuntu cloning

to clone a ubuntu image: 

cd /nfsroot/lxcpet
emacs -nw etc/hostname ### change hostname
emacs -nw etc/mailname ### change hostname (debian 11)
emacs -nw etc/defaultdomain ### change the NIS domainname
emacs -nw etc/yp.conf ### change the NIS server
cp -pvf ../lxcpet-SL610/etc/ssh/*key* etc/ssh/ ### preserve the ssh keys
emacs -nw opt/gonodeinfo/gonodeinfo.conf ### update information
emacs -nw root/.ssh/authorized_keys ### update root ssh keys

Ubuntu boot loader

boot from ZFS

root@daq00:~# zfs list
NAME                                               USED  AVAIL     REFER  MOUNTPOINT
rpool                                              147G  1.62T       96K  /
rpool/ROOT                                        17.8G  1.62T       96K  none
rpool/ROOT/ubuntu_00aaaa                          17.8G  1.62T     6.22G  /
  • copy OS image to rpool/ROOT/ubuntu_00aaaa
  • zfs set mountpoint=/ rpool
  • zfs set mountpoint=none rpool/ROOT
  • zfs set mountpoint=/ rpool/ROOT/ubuntu_00aaaa
  • zfs get all | grep mountpoint
rpool                     mountpoint            /                      local
rpool/ROOT                mountpoint            none                   local
rpool/ROOT/ubuntu_00aaaa  mountpoint            /                      local
  • in linux kernel command line (syslinux.cfg), set "root=" to "root=ZFS=rpool/ROOT/ubuntu_00aaaa"

boot from ZFS mirror

setup the EFI partitions

  • assuming /dev/sdb is already setup for EFI boot, setup /dev/sda the same way:
  • partition the second boot disk same as first boot disk:
root@grsnis01:~# gdisk -l /dev/sdb
Found valid GPT with protective MBR; using GPT.
Number  Start (sector)    End (sector)  Size       Code  Name
   1            2048         1050623   512.0 MiB   EF00  EFI system partition
   2         1050624      3907029134   1.8 TiB     8300  Linux filesystem
root@grsnis01:~#
  • mkfs.msdos /dev/sdX1
  • create mount points
mkdir /boot/efi-sda
mkdir /boot/efi-sdb
  • add to /etc/fstab
/dev/sda1 /boot/efi-sda       vfat    umask=0022,fmask=0022,dmask=0022,nofail      0       1 
/dev/sdb1 /boot/efi-sdb       vfat    umask=0022,fmask=0022,dmask=0022,nofail      0       1
  • mount -a
  • df | grep boot
root@grsnis01:~# df | grep boot
/dev/sdb1                    523248    98100     425148  19% /boot/efi-sdb
/dev/sda1                    523248        4     523244   1% /boot/efi-sda
  • copy boot files to new boot disk
  • cd /boot/efi-sdX; rsync -av . /boot/efi-sdY
  • set BIOS to boot from "UEFI Hard drive", disable legacy boot (except for booting from USB key in legacy mode)
  • if using UEFI boot syslinux per these instructions, linux kernel update has to be done manually:
  • run ~/git/scripts/etc/update_efi_mirror.perl, follow instructions that it prints.

setup zfs partitions

use partitions compatible with Ubuntu "install on ZFS"

  • gdisk "o" to create new GPT partition table
  • gdisk "n" +512M ef00 to create EFI partition
  • gdisk "n" +2G 8200 to create linux swap partition (not used)
  • gdisk "n" +2G BE00 to create ZFS bpool partition
  • gdisk "n" xxx BF00 create ZFS rpool partition
# gdisk -l /dev/sda
Number  Start (sector)    End (sector)  Size       Code  Name
   1            2048         1050623   512.0 MiB   EF00  EFI System Partition
   2         1050624         5244927   2.0 GiB     8200  
   3         5244928         9439231   2.0 GiB     BE00  
   4         9439232       234441614   107.3 GiB   BF00  
root@midm9a:~#

setup zfs mirror

root@grsnis01:~# ls -l /dev/disk/by-id/ata*part2
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2 -> ../../sda2
lrwxrwxrwx 1 root root 10 Feb 19 16:47 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 -> ../../sdb2

root@grsnis01:~# zpool status
  pool: rpool
 state: ONLINE
  scan: none requested
config:

        NAME                                             STATE     READ WRITE CKSUM
        rpool                                            ONLINE       0     0     0
          ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE       0     0     0

errors: No known data errors

root@grsnis01:~# zpool attach rpool ata-WDC_WDS200T2B0A-00SM50_205007801101-part2 /dev/disk/by-id/ata-WDC_WDS200T2B0A-00SM50_205007801081-part2

root@grsnis01:~# zpool status
  pool: rpool
 state: ONLINE
status: One or more devices is currently being resilvered.  The pool will
        continue to function, possibly in a degraded state.
action: Wait for the resilver to complete.
  scan: resilver in progress since Fri Feb 19 16:54:39 2021
        12.6G scanned at 3.16G/s, 1.02G issued at 262M/s, 12.6G total
        1.02G resilvered, 8.09% done, 0 days 00:00:45 to go
config:

        NAME                                               STATE     READ WRITE CKSUM
        rpool                                              ONLINE       0     0     0
          mirror-0                                         ONLINE       0     0     0
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE       0     0     0
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE       0     0     0  (resilvering)

errors: No known data errors
  • wait
root@grsnis01:~# zpool status
  pool: rpool
 state: ONLINE
  scan: resilvered 12.7G in 0 days 00:00:40 with 0 errors on Fri Feb 19 16:55:19 2021
config:

        NAME                                               STATE     READ WRITE CKSUM
        rpool                                              ONLINE       0     0     0
          mirror-0                                         ONLINE       0     0     0
            ata-WDC_WDS200T2B0A-00SM50_205007801101-part2  ONLINE       0     0     0
            ata-WDC_WDS200T2B0A-00SM50_205007801081-part2  ONLINE       0     0     0

errors: No known data errors

maintenance commands

  • update-initramfs -v -u
  • grub-install /dev/sda

Convert from single to dual mirrored ZFS SSD

Assuming Ubuntu LTS 22.04 with "instal on ZFS" option, we will add a second SSD, configure ZFS to use both SSDs in mirrored configuration and setup grub to boot from either SSD. This is intended to create a full redundant system where failure of either SSD does not break the system.

  • identify first SSD
root@midm9b:~# ./smart-status.perl 
        Disk                    model               serial     temperature  realloc  pending   uncorr  CRC err     RRER Errors     Link
    /dev/sda  WD Blue SA510 2.5 250GB         22243Z803769              24        .        ?        ?        .        ?        .      6.0
root@midm9b:~#
  • connect second SSD of identical size
root@midm9b:~# ./smart-status.perl 
        Disk                    model               serial     temperature  realloc  pending   uncorr  CRC err     RRER   Errors     Link
    /dev/sda  WD Blue SA510 2.5 250GB         22243Z803769              24        .        ?        ?        .        ?        .      6.0
    /dev/sdb  WD Blue SA510 2.5 250GB         22243Z803852              25        .        ?        ?        .        ?        .      6.0
root@midm9b:~#
  • if second SSD is not autodetected, reboot
  • Clone partition table automatically

If both SSDs are identical size, use this simpler method of duplicating the partition table: 

root@midm9b:~# sfdisk -d /dev/sda > part_table
root@midm9b:~# grep -v ^label-id part_table | sed -e 's/, *uuid=[0-9A-F-]*//' | sfdisk /dev/sdb

The grep and sed in the second command are there to prevent disk ID and partition IDs from being cloned. Alternatively the part_table file can be edited manually to remove the label-id line and the uuid entries from the individual partitions.

  • Clone partition table manually (e.g. for different size disks)
  • list partition table of first SSD:
root@midm9b:~# fdisk -l /dev/sda
Disk /dev/sda: 232.89 GiB, 250059350016 bytes, 488397168 sectors
Disk model: WD Blue SA510 2.
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: 951A4174-B4C6-400D-99F5-BE9B5627FA8E

Device       Start       End   Sectors   Size Type
/dev/sda1     2048   1050623   1048576   512M EFI System
/dev/sda2  1050624   5244927   4194304     2G Linux swap
/dev/sda3  5244928   9439231   4194304     2G Solaris boot
/dev/sda4  9439232 488397134 478957903 228.4G Solaris root
root@midm9b:~#
  • create identical partitions on second SSD, use sector numbers from above.
root@midm9b:~# gdisk /dev/sdb
GPT fdisk (gdisk) version 1.0.8

Partition table scan:
  MBR: not present
  BSD: not present
  APM: not present
  GPT: not present

Creating new GPT entries in memory.

Command (? for help): n
Partition number (1-128, default 1): 
First sector (34-488397134, default = 2048) or {+-}size{KMGTP}: 
Last sector (2048-488397134, default = 488397134) or {+-}size{KMGTP}: 1050623
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): ef00
Changed type of partition to 'EFI system partition'

Command (? for help): n
Partition number (2-128, default 2): 
First sector (34-488397134, default = 1050624) or {+-}size{KMGTP}: 
Last sector (1050624-488397134, default = 488397134) or {+-}size{KMGTP}: 5244927
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): 8200
Changed type of partition to 'Linux swap'

Command (? for help): n
Partition number (3-128, default 3): 
First sector (34-488397134, default = 5244928) or {+-}size{KMGTP}: 
Last sector (5244928-488397134, default = 488397134) or {+-}size{KMGTP}: 9439231
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): be00
Changed type of partition to 'Solaris boot'

Command (? for help): n
Partition number (4-128, default 4): 
First sector (34-488397134, default = 9439232) or {+-}size{KMGTP}: 
Last sector (9439232-488397134, default = 488397134) or {+-}size{KMGTP}: 
Current type is 8300 (Linux filesystem)
Hex code or GUID (L to show codes, Enter = 8300): bf00
Changed type of partition to 'Solaris root'

Command (? for help): w

Final checks complete. About to write GPT data. THIS WILL OVERWRITE EXISTING
PARTITIONS!!

Do you want to proceed? (Y/N): y
OK; writing new GUID partition table (GPT) to /dev/sdb.
The operation has completed successfully.
root@midm9b:~# fdisk -l /dev/sda /dev/sdb
Disk /dev/sda: 232.89 GiB, 250059350016 bytes, 488397168 sectors
Disk model: WD Blue SA510 2.
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: 951A4174-B4C6-400D-99F5-BE9B5627FA8E

Device       Start       End   Sectors   Size Type
/dev/sda1     2048   1050623   1048576   512M EFI System
/dev/sda2  1050624   5244927   4194304     2G Linux swap
/dev/sda3  5244928   9439231   4194304     2G Solaris boot
/dev/sda4  9439232 488397134 478957903 228.4G Solaris root


Disk /dev/sdb: 232.89 GiB, 250059350016 bytes, 488397168 sectors
Disk model: WD Blue SA510 2.
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: EB251739-30C6-422F-A505-5887B5A0B603

Device       Start       End   Sectors   Size Type
/dev/sdb1     2048   1050623   1048576   512M EFI System
/dev/sdb2  1050624   5244927   4194304     2G Linux swap
/dev/sdb3  5244928   9439231   4194304     2G Solaris boot
/dev/sdb4  9439232 488397134 478957903 228.4G Solaris root
root@midm9b:~#
  • identify second SSD partitions
root@midm9b:~# ls -l /dev/disk/by-id/ata*part3
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part3 -> ../../sda3
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3 -> ../../sdb3
root@midm9b:~# ls -l /dev/disk/by-id/ata*part4
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part4 -> ../../sda4
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4 -> ../../sdb4
  • convert bpool from single disk to mirrored disk:
root@midm9b:~# zpool status
  pool: bpool
 state: ONLINE
config:

	NAME                                    STATE     READ WRITE CKSUM
	bpool                                   ONLINE       0     0     0
	  99e03dc0-7d4d-f24b-8fa1-f042b9f135db  ONLINE       0     0     0

errors: No known data errors

  pool: rpool
 state: ONLINE
config:

	NAME                                    STATE     READ WRITE CKSUM
	rpool                                   ONLINE       0     0     0
	  f6fd54f8-3af7-b943-ae3d-a4e480537fb9  ONLINE       0     0     0

errors: No known data errors
root@midm9b:~# zpool attach bpool 99e03dc0-7d4d-f24b-8fa1-f042b9f135db /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3
root@midm9b:~# zpool status bpool
  pool: bpool
 state: ONLINE
  scan: resilvered 247M in 00:00:00 with 0 errors on Fri Jan 20 19:39:40 2023
config:

	NAME                                                STATE     READ WRITE CKSUM
	bpool                                               ONLINE       0     0     0
	  mirror-0                                          ONLINE       0     0     0
	    99e03dc0-7d4d-f24b-8fa1-f042b9f135db            ONLINE       0     0     0
	    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3  ONLINE       0     0     0

errors: No known data errors
  • convert rpool
root@midm9b:~# ls -l /dev/disk/by-id/ata*part4
lrwxrwxrwx 1 root root 10 Jan 20 18:37 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803769-part4 -> ../../sda4
lrwxrwxrwx 1 root root 10 Jan 20 19:34 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4 -> ../../sdb4
root@midm9b:~# zpool attach rpool f6fd54f8-3af7-b943-ae3d-a4e480537fb9 /dev/disk/by-id/ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4
root@midm9b:~# zpool status rpool
  pool: rpool
 state: ONLINE
status: One or more devices is currently being resilvered.  The pool will
	continue to function, possibly in a degraded state.
action: Wait for the resilver to complete.
  scan: resilver in progress since Fri Jan 20 19:40:45 2023
	5.83G scanned at 664M/s, 2.92M issued at 332K/s, 9.11G total
	0B resilvered, 0.03% done, no estimated completion time
config:

	NAME                                                STATE     READ WRITE CKSUM
	rpool                                               ONLINE       0     0     0
	  mirror-0                                          ONLINE       0     0     0
	    f6fd54f8-3af7-b943-ae3d-a4e480537fb9            ONLINE       0     0     0
	    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4  ONLINE       0     0     0

errors: No known data errors
root@midm9b:~#
  • wait for resilver to complete
root@midm9b:~# zpool status
  pool: bpool
 state: ONLINE
  scan: resilvered 247M in 00:00:00 with 0 errors on Fri Jan 20 19:39:40 2023
config:

	NAME                                                STATE     READ WRITE CKSUM
	bpool                                               ONLINE       0     0     0
	  mirror-0                                          ONLINE       0     0     0
	    99e03dc0-7d4d-f24b-8fa1-f042b9f135db            ONLINE       0     0     0
	    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part3  ONLINE       0     0     0

errors: No known data errors

  pool: rpool
 state: ONLINE
  scan: resilvered 9.65G in 00:00:36 with 0 errors on Fri Jan 20 19:41:21 2023
config:

	NAME                                                STATE     READ WRITE CKSUM
	rpool                                               ONLINE       0     0     0
	  mirror-0                                          ONLINE       0     0     0
	    f6fd54f8-3af7-b943-ae3d-a4e480537fb9            ONLINE       0     0     0
	    ata-WD_Blue_SA510_2.5_250GB_22243Z803852-part4  ONLINE       0     0     0

errors: No known data errors
  • enable booting from second SSD: (instead of /dev/sda1, /dev/sdb1, use UUID=xxx)
root@midm9b:~# mkfs.msdos /dev/sdb1
root@midm9b:~# mkdir /boot/efi-sda
root@midm9b:~# mkdir /boot/efi-sdb
root@midm9b:~# echo "/dev/sda1 /boot/efi-sda       vfat    umask=0022,fmask=0022,dmask=0022,nofail      0       1" >> /etc/fstab
root@midm9b:~# echo "/dev/sdb1 /boot/efi-sdb       vfat    umask=0022,fmask=0022,dmask=0022,nofail      0       1" >> /etc/fstab
root@midm9b:~# mount -a
root@midm9b:~# df -kl
Filesystem                                       1K-blocks    Used Available Use% Mounted on
...
/dev/sda1                                           523244   13720    509524   3% /boot/efi
/dev/sdb1                                           523244       4    523240   1% /boot/efi-sdb
...
root@midm9b:~# rsync -av /boot/efi/ /boot/efi-sdb/
sending incremental file list
EFI/
...
root@midm9b:~# ls -l /boot/efi-sda
total 8
drwxr-xr-x 4 root root 4096 Jan 19 23:26 EFI
drwxr-xr-x 5 root root 4096 Jan 19 23:26 grub
root@midm9b:~# ls -l /boot/efi-sdb
total 8
drwxr-xr-x 4 root root 4096 Jan 19 23:26 EFI
drwxr-xr-x 5 root root 4096 Jan 19 23:26 grub
root@midm9b:~#
  • setup script to update grub on second SSD, it must be run manually after every kernel update
root@midm9b:~# ln -s ~/git/scripts/etc/update_efi_grub.perl ~/
root@midm9b:~# ~/update_efi_grub.perl -u
EFI dir: /boot/efi-sda
/boot/efi-sda: update grub: rsync  -av --delete-after --modify-window=2 /boot/efi/grub/ /boot/efi-sda/grub
building file list ... done

sent 5,313 bytes  received 11 bytes  10,648.00 bytes/sec
total size is 7,944,644  speedup is 1,492.23
/boot/efi-sda: update efi:  rsync  -av --delete-after --modify-window=2 /boot/efi/EFI/  /boot/efi-sda/EFI
building file list ... done

sent 216 bytes  received 11 bytes  454.00 bytes/sec
total size is 5,452,378  speedup is 24,019.29
EFI dir: /boot/efi-sdb
/boot/efi-sdb: update grub: rsync  -av --delete-after --modify-window=2 /boot/efi/grub/ /boot/efi-sdb/grub
building file list ... done

sent 5,313 bytes  received 11 bytes  10,648.00 bytes/sec
total size is 7,944,644  speedup is 1,492.23
/boot/efi-sdb: update efi:  rsync  -av --delete-after --modify-window=2 /boot/efi/EFI/  /boot/efi-sdb/EFI
building file list ... done

sent 216 bytes  received 11 bytes  454.00 bytes/sec
total size is 5,452,378  speedup is 24,019.29
root@midm9b:~#

Disable NetworkManager

NOTE: THIS IS BROKEN IN UBUNTU LTS 22.04

NetworkManager is useful for configuring dynamic network interfaces, i.e. laptops that often move between networks, or connect to multiple choice of wifi networks, etc.

For machines with statically configured network interfaces, NetworkManager is not necessary.

As it has been observed to become confused and observed to malfunction when network links go up and down (it keeps unnecessarily reconfiguring the ip address, etc), it can be usefuil to disable it.

  • list all network interfaces
# /bin/ls -1 /sys/class/net/
enp0s31f6
lo
  • edit /etc/network/interfaces:
rename enp0s31f6=eth0
auto eth0
iface eth0 inet static
   address 142.90.120.94/19
   gateway 142.90.100.18
  • statically configure systemd-resolved
    • create /etc/systemd/resolved.conf.d/resolved.conf with this contents:
[Resolve]
DNS=142.90.100.19
Domains=triumf.ca
    • systemctl restart systemd-resolved
    • resolvectl
    • systemd-analyze cat-config systemd/resolved.conf
  • disable NetworkManager
systemctl disable NetworkManager
  • reboot

Configure ECC memory

Configure EDAC

  • apt install edac-utils

Intel i3-2120

root@musr00:~# edac-ctl --mainboard
edac-ctl: mainboard: Supermicro X9SCL/X9SCM
root@musr00:~# edac-ctl --status
edac-ctl: drivers not loaded.

Intel E-2236

root@daq00:~# edac-ctl --mainboard
edac-ctl: mainboard: Supermicro X11SCM-F
root@daq00:~# edac-ctl --status
edac-ctl: drivers are loaded.
root@daq00:~# edac-util 
edac-util: No errors to report.
root@daq00:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
  • check edac sysfs files (Intel)
root@daq00:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_count
-r--r--r-- 1 root root 4096 Jan 25 15:10 ce_noinfo_count
-r--r--r-- 1 root root 4096 Jan 25 15:10 max_location
-r--r--r-- 1 root root 4096 Jan 25 15:10 mc_name
drwxr-xr-x 2 root root    0 Jan 25 15:10 power
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank0
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank1
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank2
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank3
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank4
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank5
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank6
drwxr-xr-x 3 root root    0 Jan 25 15:10 rank7
--w------- 1 root root 4096 Jan 25 15:10 reset_counters
-r--r--r-- 1 root root 4096 Jan 25 15:10 seconds_since_reset
-r--r--r-- 1 root root 4096 Jan 25 15:10 size_mb
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_count
-r--r--r-- 1 root root 4096 Jan 25 15:10 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Jan 25 15:10 uevent
root@daq00:~#

Intel E3-1270 v6

root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --mainboard
edac-ctl: mainboard: Supermicro X11SSH-F
root@wheel-SYS-5019S-M:~/git/scripts# edac-ctl --status
edac-ctl: drivers are loaded.
root@grsnis01:~# edac-util
edac-util: No errors to report.
root@grsnis01:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@grsnis01:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 ce_noinfo_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 max_location
-r--r--r-- 1 root root 4096 Feb 19 12:35 mc_name
drwxr-xr-x 2 root root    0 Feb 19 12:35 power
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank0
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank1
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank2
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank3
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank4
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank5
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank6
drwxr-xr-x 3 root root    0 Feb 19 12:35 rank7
--w------- 1 root root 4096 Feb 19 12:35 reset_counters
-r--r--r-- 1 root root 4096 Feb 19 12:35 seconds_since_reset
-r--r--r-- 1 root root 4096 Feb 19 12:35 size_mb
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_count
-r--r--r-- 1 root root 4096 Feb 19 12:35 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Feb 19 12:35 uevent
root@grsnis01:~#

Intel E3-1245 v6

[root@alphagdaq ~]# edac-ctl --mainboard
edac-ctl: mainboard: Supermicro X11SSH-F
[root@alphagdaq ~]# edac-ctl --mainboard
edac-ctl: mainboard: Supermicro X11SSH-F
[root@alphagdaq ~]# edac-ctl --status
edac-ctl: drivers are loaded.
[root@alphagdaq ~]# edac-util
edac-util: No errors to report.
[root@alphagdaq ~]# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
[root@alphagdaq ~]# ras-mc-ctl --layout
          +-----------------------------------------------+
          |                      mc0                      |
          |  csrow0   |  csrow1   |  csrow2   |  csrow3   |
----------+-----------------------------------------------+
channel1: |  8192 MB  |  8192 MB  |  8192 MB  |  8192 MB  |
channel0: |  8192 MB  |  8192 MB  |  8192 MB  |  8192 MB  |
----------+-----------------------------------------------+
[root@alphagdaq ~]# ras-mc-ctl --error-count
Label               	CE	UE
mc#0csrow#3channel#0	0	0
mc#0csrow#2channel#1	0	0
mc#0csrow#3channel#1	0	0
mc#0csrow#0channel#0	0	0
mc#0csrow#1channel#1	0	0
mc#0csrow#0channel#1	0	0
mc#0csrow#1channel#0	0	0
mc#0csrow#2channel#0	0	0
[root@alphagdaq ~]# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: Supermicro model X11SSH-F
[root@alphagdaq ~]# ras-mc-ctl --summary
DBD::SQLite::db prepare failed: no such table: mc_event at /usr/sbin/ras-mc-ctl line 1129.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1130.
[root@alphagdaq ~]#

AMD 3700X

(memory is non-ECC) 

root@daq13:~# edac-ctl --mainboard
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
root@daq13:~# 
root@daq13:~# 
root@daq13:~# edac-ctl --status
edac-ctl: drivers not loaded.
root@daq13:~# edac-util 
edac-util: Error: No memory controller data found.
root@daq13:~# edac-util -s
edac-util: EDAC drivers loaded. No memory controllers found
root@daq13:~# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 2 root root    0 Jan 25 15:26 power
lrwxrwxrwx 1 root root    0 Jan 21 16:16 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 Jan 21 16:16 uevent

(memory is ECC) 

root@trinatdaq:~# edac-ctl --mainboard
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-E GAMING
root@trinatdaq:~# edac-ctl --status
edac-ctl: drivers are loaded.
root@trinatdaq:~# edac-util 
edac-util: No errors to report.
root@trinatdaq:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 7 root root    0 Dec 15 13:04 mc0
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
lrwxrwxrwx 1 root root    0 Dec 13 18:31 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 Dec 13 18:31 uevent
root@trinatdaq:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 ce_noinfo_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 max_location
-r--r--r-- 1 root root 4096 Dec 15 13:04 mc_name
drwxr-xr-x 2 root root    0 Dec 15 13:04 power
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank4
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank5
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank6
drwxr-xr-x 3 root root    0 Dec 15 13:04 rank7
--w------- 1 root root 4096 Dec 15 13:04 reset_counters
-rw-r--r-- 1 root root 4096 Dec 15 13:04 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Dec 15 13:04 seconds_since_reset
-r--r--r-- 1 root root 4096 Dec 15 13:04 size_mb
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_count
-r--r--r-- 1 root root 4096 Dec 15 13:04 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Dec 15 13:04 uevent
root@trinatdaq:~#

AMD 5000G

  • no linux driver for AMD 5000-series "G" CPU
  • no mention of ECC in the BIOS settings
  • unclear status of ECC support in AMD documentation (sais only "pro" "G" CPUs have ECC)
  • unclear status of ECC support in ASUS documentation (web page out of date)

AMD 5600X

root@daq17:~# edac-ctl --mainboard
edac-ctl: mainboard: ASUSTeK COMPUTER INC. ROG STRIX B550-XE GAMING WIFI
root@daq17:~# edac-ctl --status
edac-ctl: drivers are loaded.
root@daq17:~# edac-util
edac-util: No errors to report.
root@daq17:~# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@daq17:~# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 7 root root    0 Aug 19 19:27 mc0
drwxr-xr-x 2 root root    0 Aug 19 19:27 power
lrwxrwxrwx 1 root root    0 May 10 10:11 subsystem -> ../../../../bus/edac
-rw-r--r-- 1 root root 4096 May 10 10:11 uevent
root@daq17:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Aug 19 19:27 ce_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 ce_noinfo_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 max_location
-r--r--r-- 1 root root 4096 Aug 19 19:27 mc_name
drwxr-xr-x 2 root root    0 Aug 19 19:27 power
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank4
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank5
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank6
drwxr-xr-x 3 root root    0 Aug 19 19:27 rank7
--w------- 1 root root 4096 Aug 19 19:27 reset_counters
-rw-r--r-- 1 root root 4096 Aug 19 19:27 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Aug 19 19:27 seconds_since_reset
-r--r--r-- 1 root root 4096 Aug 19 19:27 size_mb
-r--r--r-- 1 root root 4096 Aug 19 19:27 ue_count
-r--r--r-- 1 root root 4096 Aug 19 19:27 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Aug 19 19:27 uevent
root@daq17:~#

AMD 3955WX

root@alphasuperdaq:~/git/scripts/quotareport# edac-ctl --mainboard
edac-ctl: mainboard: ASUSTeK COMPUTER INC. Pro WS WRX80E-SAGE SE WIFI
root@alphasuperdaq:~/git/scripts/quotareport# edac-ctl --status
edac-ctl: drivers are loaded.
root@alphasuperdaq:~/git/scripts/quotareport# edac-util 
edac-util: No errors to report.
root@alphasuperdaq:~/git/scripts/quotareport# edac-util -s
edac-util: EDAC drivers are loaded. 1 MC detected
root@alphasuperdaq:~/git/scripts/quotareport# ls -l /sys/devices/system/edac/mc
total 0
drwxr-xr-x 19 root root    0 Dez 12 04:48 mc0
drwxr-xr-x  2 root root    0 Dez 12 04:48 power
lrwxrwxrwx  1 root root    0 Dez  9 05:31 subsystem -> ../../../../bus/edac
-rw-r--r--  1 root root 4096 Dez  9 05:31 uevent
root@alphasuperdaq:~/git/scripts/quotareport# 
root@alphasuperdaq:~# ls -l /sys/devices/system/edac/mc/mc0
total 0
-r--r--r-- 1 root root 4096 Feb 28 22:19 ce_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 ce_noinfo_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 max_location
-r--r--r-- 1 root root 4096 Feb 28 22:19 mc_name
drwxr-xr-x 2 root root    0 Dez 12 04:48 power
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank0
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank1
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank10
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank11
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank12
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank13
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank14
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank15
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank2
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank3
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank4
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank5
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank6
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank7
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank8
drwxr-xr-x 3 root root    0 Dez 12 04:48 rank9
--w------- 1 root root 4096 Feb 28 22:19 reset_counters
-rw-r--r-- 1 root root 4096 Feb 28 22:19 sdram_scrub_rate
-r--r--r-- 1 root root 4096 Feb 28 22:19 seconds_since_reset
-r--r--r-- 1 root root 4096 Feb 28 22:19 size_mb
-r--r--r-- 1 root root 4096 Feb 28 22:19 ue_count
-r--r--r-- 1 root root 4096 Feb 28 22:19 ue_noinfo_count
-rw-r--r-- 1 root root 4096 Feb 28 22:19 uevent
root@alphasuperdaq:~# 
root@alphasuperdaq:~# ras-mc-ctl --layout
Use of uninitialized value $max_pos[3] in modulus (%) at /usr/sbin/ras-mc-ctl line 868.
Use of uninitialized value $d in numeric ge (>=) at /usr/sbin/ras-mc-ctl line 869.
Use of uninitialized value $d in sprintf at /usr/sbin/ras-mc-ctl line 872.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
Use of uninitialized value $pos[3] in join or string at /usr/sbin/ras-mc-ctl line 791.
    +-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
    |                                                                                              mc0                                                                                              |
    |                                            csrow0                                             |                                            csrow1                                             |
    | channel0  | channel1  | channel2  | channel3  | channel4  | channel5  | channel6  | channel7  | channel0  | channel1  | channel2  | channel3  | channel4  | channel5  | channel6  | channel7  |
----+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+

0: |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |     0 MB  |
----+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
root@alphasuperdaq:~# ras-mc-ctl --error-count
Label               	CE	UE
mc#0csrow#0channel#2	0	0
mc#0csrow#1channel#7	0	0
mc#0csrow#0channel#3	0	0
mc#0csrow#1channel#4	0	0
mc#0csrow#1channel#2	0	0
mc#0csrow#0channel#7	0	0
mc#0csrow#1channel#3	0	0
mc#0csrow#0channel#4	0	0
mc#0csrow#1channel#1	0	0
mc#0csrow#1channel#0	0	0
mc#0csrow#1channel#5	0	0
mc#0csrow#0channel#6	0	0
mc#0csrow#0channel#1	0	0
mc#0csrow#0channel#5	0	0
mc#0csrow#0channel#0	0	0
mc#0csrow#1channel#6	0	0
root@alphasuperdaq:~# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: ASUSTeK COMPUTER INC. model Pro WS WRX80E-SAGE SE WIFI
root@alphasuperdaq:~# ras-mc-ctl --summary
No Memory errors.

No PCIe AER errors.

No Extlog errors.

DBD::SQLite::db prepare failed: no such table: devlink_event at /usr/sbin/ras-mc-ctl line 1181.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1182.
root@alphasuperdaq:~#

Configure rasdaemon

apt install rasdaemon

systemctl enable rasdaemon
systemctl restart rasdaemon
systemctl status rasdaemon

● rasdaemon.service - RAS daemon to log the RAS events
     Loaded: loaded (/lib/systemd/system/rasdaemon.service; enabled; vendor preset: enabled)
     Active: active (running) since Mon 2021-01-25 15:16:37 PST; 3min 5s ago
   Main PID: 2477175 (rasdaemon)
      Tasks: 1 (limit: 76958)
     Memory: 17.1M
     CGroup: /system.slice/rasdaemon.service
             └─2477175 /usr/sbin/rasdaemon -f -r

Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: ras:extlog_mem_event event enabled
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Enabled event ras:extlog_mem_event
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: ras:extlog_mem_event event enabled
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Listening to events for cpus 0 to 11
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: Enabled event ras:extlog_mem_event
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mc_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording aer_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording extlog_event events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording mce_record events
Jan 25 15:16:37 daq00.triumf.ca rasdaemon[2477175]: rasdaemon: Recording arm_event events

Get reports

  • Intel 2x32GB ECC DIMMs
root@daq00:~# ras-mc-ctl --layout
          +-------------------------+
          |           mc0           |
          |   csrow0   |   csrow1   |
----------+-------------------------+
channel1: |  16384 MB  |  16384 MB  |
channel0: |  16384 MB  |  16384 MB  |
----------+-------------------------+
root@daq00:~# ras-mc-ctl --error-count
Label                   CE      UE
mc#0csrow#1channel#1    0       0
mc#0csrow#1channel#0    0       0
mc#0csrow#0channel#0    0       0
mc#0csrow#0channel#1    0       0
root@daq00:~#
  • Intel 4x16GB ECC DIMMs
root@daq00:~# ras-mc-ctl --error-count
Label                   CE      UE
mc#0csrow#0channel#1    0       0
mc#0csrow#2channel#0    0       0
mc#0csrow#0channel#0    0       0
mc#0csrow#2channel#1    0       0
mc#0csrow#1channel#0    0       0
mc#0csrow#1channel#1    0       0
mc#0csrow#3channel#0    0       0
mc#0csrow#3channel#1    0       0
root@daq00:~# 
root@daq00:~# ras-mc-ctl --layout
          +-----------------------+
          |          mc0          |
          |  csrow0   |  csrow1   |
----------+-----------------------+
channel1: |  8192 MB  |  8192 MB  |
channel0: |  8192 MB  |  8192 MB  |
----------+-----------------------+
root@daq00:~# 
root@daq00:~# 
root@daq00:~# 
root@daq00:~# ras-mc-ctl --print-labels
ras-mc-ctl: Error: No dimm labels for Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --mainboard
ras-mc-ctl: mainboard: Supermicro model X11SCM-F
root@daq00:~# ras-mc-ctl --summary
No Memory errors.

No PCIe AER errors.

No Extlog errors.

DBD::SQLite::db prepare failed: no such table: devlink_event at /usr/sbin/ras-mc-ctl line 1181.
Can't call method "execute" on an undefined value at /usr/sbin/ras-mc-ctl line 1182.
root@daq00:~#

note: ubuntu LTS 22.04 DBD::SQLite::db error is not there.

sensors

ASUS H110M-A/M.2

  • BIOS version 4202
  • echo modprobe coretemp >> /etc/rc.local
  • echo modprobe nct6775 >> /etc/rc.local
root@midpol:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +33.0°C  (high = +80.0°C, crit = +100.0°C)
Core 0:        +33.0°C  (high = +80.0°C, crit = +100.0°C)
Core 1:        +30.0°C  (high = +80.0°C, crit = +100.0°C)

acpitz-acpi-0
Adapter: ACPI interface
temp1:        +27.8°C  (crit = +119.0°C)
temp2:        +29.8°C  (crit = +119.0°C)

nct6793-isa-0290
Adapter: ISA adapter
in0:                      368.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                      152.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      928.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.14 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                      1000.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                     152.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                     128.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                     136.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                     120.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                     136.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                     1004 RPM  (min =    0 RPM)
fan2:                     1143 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
fan6:                        0 RPM  (min =    0 RPM)
SYSTIN:                   +118.0°C  (high = +98.0°C, hyst = +95.0°C)  sensor = thermistor
CPUTIN:                    +29.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                   +30.0°C    sensor = thermistor
AUXTIN1:                  +112.0°C    sensor = thermistor
AUXTIN2:                  +111.0°C    sensor = thermistor
AUXTIN3:                  +110.0°C    sensor = thermistor
PECI Agent 0:              +31.0°C  (high = +98.0°C, hyst = +95.0°C)
                                    (crit = +100.0°C)
PECI Agent 0 Calibration:  +36.5°C  
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C  
PCH_CHIP_TEMP:              +0.0°C  
TSI2_TEMP:                +3892314.0°C  
TSI3_TEMP:                +3892314.0°C  
TSI4_TEMP:                +3892314.0°C  
TSI5_TEMP:                +3892314.0°C  
TSI6_TEMP:                +3892314.0°C  
TSI7_TEMP:                +3892314.0°C  
intrusion0:               ALARM
intrusion1:               ALARM
beep_enable:              disabled

root@midpol:~#

ASUS P9X79 WS

root@daq14:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +35.0°C  (high = +82.0°C, crit = +100.0°C)
Core 0:        +29.0°C  (high = +82.0°C, crit = +100.0°C)
Core 1:        +24.0°C  (high = +82.0°C, crit = +100.0°C)
Core 2:        +35.0°C  (high = +82.0°C, crit = +100.0°C)
Core 3:        +32.0°C  (high = +82.0°C, crit = +100.0°C)

nouveau-pci-0200
Adapter: PCI adapter
GPU core:    900.00 mV (min =  +0.85 V, max =  +1.00 V)
temp1:        +39.0°C  (high = +95.0°C, hyst =  +3.0°C)
                       (crit = +105.0°C, hyst =  +5.0°C)
                       (emerg = +135.0°C, hyst =  +5.0°C)

nct6776-isa-0290
Adapter: ISA adapter
Vcore:           1.04 V  (min =  +0.00 V, max =  +1.74 V)
in1:             1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
AVCC:            3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
+3.3V:           3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:             1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:             2.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:           904.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
3VSB:            3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
Vbat:            3.30 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:          1265 RPM  (min =    0 RPM)
fan2:          1909 RPM  (min =    0 RPM)
fan3:             0 RPM  (min =    0 RPM)
fan4:             0 RPM  (min =    0 RPM)
fan5:             0 RPM  (min =    0 RPM)
SYSTIN:         +34.0°C  (high =  +0.0°C, hyst =  +0.0°C)  ALARM  sensor = thermistor
CPUTIN:         +58.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermal diode
AUXTIN:         +31.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
PECI Agent 0:   +31.0°C  (high = +80.0°C, hyst = +75.0°C)
                         (crit = +96.0°C)
PCH_CHIP_TEMP:   +0.0°C  
PCH_CPU_TEMP:    +0.0°C  
PCH_MCH_TEMP:    +0.0°C  
intrusion0:    ALARM
intrusion1:    ALARM
beep_enable:   disabled

root@daq14:~#

ASUS TUF GAMING B550M-PLUS WIFI II

  • BIOS 2803, 2806
  • echo modprobe nct6775 >> /etc/rc.local
root@midm9a:~# sensors
nct6798-isa-0290
Adapter: ISA adapter
in0:                      488.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.33 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.82 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                       1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                       1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                       1.03 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                       1.01 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                       1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                        0 RPM  (min =    0 RPM)
fan2:                      760 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan7:                     1264 RPM  (min =    0 RPM)
SYSTIN:                    +25.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +22.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                   +95.0°C    sensor = thermistor
AUXTIN1:                   +25.0°C    sensor = thermistor
AUXTIN2:                   +25.0°C    sensor = thermistor
AUXTIN3:                   +25.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +23.5°C  
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C  
PCH_CHIP_TEMP:              +0.0°C  
PCH_CPU_TEMP:               +0.0°C  
TSI0_TEMP:                 +32.4°C  
intrusion0:               ALARM
intrusion1:               ALARM
beep_enable:              disabled

amdgpu-pci-0800
Adapter: PCI adapter
vddgfx:        1.45 V  
vddnb:       993.00 mV 
edge:         +28.0°C  
PPT:          20.00 W  

k10temp-pci-00c3
Adapter: PCI adapter
Tctl:         +33.4°C  

root@midm9a:~#

ASUS ASUS ROG STRIX B550-XE GAMING WIFI

  • BIOS 2423, 2604
  • echo modprobe nct6775 >> /etc/rc.local
root@daq13:~# sensors
nct6798-isa-0290
Adapter: ISA adapter
in0:                      344.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                      992.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                      960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      216.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.41 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.30 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.81 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                     960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                     960.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                       1.03 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                     280.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                     208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                      845 RPM  (min =    0 RPM)
fan2:                      998 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +28.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +27.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                   +94.0°C    sensor = thermistor
AUXTIN1:                   +28.0°C    sensor = thermistor
AUXTIN2:                   +28.0°C    sensor = thermistor
AUXTIN3:                   +97.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +27.5°C  
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C  
PCH_CHIP_TEMP:              +0.0°C  
PCH_CPU_TEMP:               +0.0°C  
TSI0_TEMP:                 +33.6°C  
intrusion0:               ALARM
intrusion1:               ALARM
beep_enable:              disabled

amdgpu-pci-0600
Adapter: PCI adapter
vddgfx:        1.45 V  
vddnb:       999.00 mV 
edge:         +29.0°C  
PPT:          14.00 W  

iwlwifi_1-virtual-0
Adapter: Virtual device
temp1:        +30.0°C  

k10temp-pci-00c3
Adapter: PCI adapter
Tctl:         +33.9°C  

root@daq13:~#

ASUS ASUS ROG STRIX B550-E GAMING

  • bios 2803
  • echo modprobe jc42 >> /etc/rc.local
  • echo modprobe nct6775 >> /etc/rc.local
root@daq17:~# sensors
jc42-i2c-1-1b
Adapter: SMBus PIIX4 adapter port 0 at 0b00
temp1:        +25.0°C  (low  =  +0.0°C)                  ALARM (HIGH, CRIT)
                       (high =  +0.0°C, hyst =  +0.0°C)
                       (crit =  +0.0°C, hyst =  +0.0°C)

iwlwifi_1-virtual-0
Adapter: Virtual device
temp1:        +28.0°C  

nouveau-pci-0800
Adapter: PCI adapter
GPU core:    900.00 mV (min =  +0.85 V, max =  +1.00 V)
temp1:        +34.0°C  (high = +95.0°C, hyst =  +3.0°C)
                       (crit = +105.0°C, hyst =  +5.0°C)
                       (emerg = +135.0°C, hyst =  +5.0°C)

nct6798-isa-0290
Adapter: ISA adapter
in0:                      288.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      224.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.36 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.31 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        1.79 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                       1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                       1.06 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                       1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                     280.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                     208.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                      843 RPM  (min =    0 RPM)
fan2:                      629 RPM  (min =    0 RPM)
fan3:                      746 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +22.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +25.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                   +93.0°C    sensor = thermistor
AUXTIN1:                   +22.0°C    sensor = thermistor
AUXTIN2:                   +22.0°C    sensor = thermistor
AUXTIN3:                   +96.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +25.5°C  
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C  
PCH_CHIP_TEMP:              +0.0°C  
PCH_CPU_TEMP:               +0.0°C  
TSI0_TEMP:                 +27.6°C  
intrusion0:               ALARM
intrusion1:               ALARM
beep_enable:              disabled

jc42-i2c-1-1a
Adapter: SMBus PIIX4 adapter port 0 at 0b00
temp1:        +23.2°C  (low  =  +0.0°C)                  ALARM (HIGH, CRIT)
                       (high =  +0.0°C, hyst =  +0.0°C)
                       (crit =  +0.0°C, hyst =  +0.0°C)

asusec-isa-0000
Adapter: ISA adapter
CPU_Opt:        0 RPM
Chipset:      +34.0°C  
CPU:          +25.0°C  
Motherboard:  +22.0°C  
T_Sensor:     -40.0°C  
VRM:          +31.0°C  

k10temp-pci-00c3
Adapter: PCI adapter
Tctl:         +28.0°C  
Tccd1:        +27.5°C  

root@daq17:~#

ASUS PRIME B650-PLUS

  • BIOS 1811
  • echo modprobe nct6775 >> /etc/rc.local
root@dsdaqgw:~# sensors
amdgpu-pci-0b00
Adapter: PCI adapter
vddgfx:      930.00 mV 
vddnb:         1.19 V  
edge:         +38.0°C  
PPT:          25.10 W  

nct6799-isa-0290
Adapter: ISA adapter
in0:                      920.00 mV (min =  +0.00 V, max =  +1.74 V)
in1:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in2:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in3:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in4:                        1.02 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in5:                        1.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in6:                      320.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in7:                        3.39 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in8:                        3.28 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in9:                        3.38 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in10:                       1.28 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in11:                       1.10 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in12:                       1.04 V  (min =  +0.00 V, max =  +0.00 V)  ALARM
in13:                     416.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
in14:                     328.00 mV (min =  +0.00 V, max =  +0.00 V)  ALARM
fan1:                        0 RPM  (min =    0 RPM)
fan2:                     1253 RPM  (min =    0 RPM)
fan3:                        0 RPM  (min =    0 RPM)
fan4:                        0 RPM  (min =    0 RPM)
fan5:                        0 RPM  (min =    0 RPM)
fan7:                        0 RPM  (min =    0 RPM)
SYSTIN:                    +33.0°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
CPUTIN:                    +35.5°C  (high = +80.0°C, hyst = +75.0°C)  sensor = thermistor
AUXTIN0:                   +78.0°C    sensor = thermistor
AUXTIN1:                   +11.0°C    sensor = thermistor
AUXTIN2:                   +20.0°C    sensor = thermistor
AUXTIN3:                   +82.0°C    sensor = thermistor
PECI Agent 0 Calibration:  +35.5°C  
PCH_CHIP_CPU_MAX_TEMP:      +0.0°C  
PCH_CHIP_TEMP:              +0.0°C  
PCH_CPU_TEMP:               +0.0°C  
TSI0_TEMP:                 +42.6°C  
intrusion0:               ALARM
intrusion1:               OK
beep_enable:              disabled

k10temp-pci-00c3
Adapter: PCI adapter
Tctl:         +42.6°C  
Tccd1:        +36.4°C  

root@dsdaqgw:~#

Enable CPU turbo mode

  • Intel CPU has a nominal CPU frequency (i.e. 3.4GHz) and a turbo-boost CPU frequency (i.e. 4.0GHz). Here we will enable this turbo-boost mode.
  • Find out CPU capability
root@daq01:~# lscpu | grep Hz
Model name:                      Intel(R) Core(TM) i7-6700 CPU @ 3.40GHz
CPU MHz:                         3965.803
CPU max MHz:                     4000.0000
CPU min MHz:                     800.0000
root@daq01:~#
  • Look up this CPU in the Intel ARK database - google for the CPU model name, i.e.

https://ark.intel.com/content/www/us/en/ark/products/88196/intel-core-i7-6700-processor-8m-cache-up-to-4-00-ghz.html

  • Find current frequency settings:
root@daq01:~# cpupower frequency-info
analyzing CPU 0:
  driver: intel_pstate
  CPUs which run at the same hardware frequency: 0
  CPUs which need to have their frequency coordinated by software: 0
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "powersave" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 2.72 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
root@daq01:~#
  • Note the following:
    • current governor is "powersave"
    • "performance" governor is available
    • "boost state support" is supported and active.
  • Confirm CPU frequency governor:
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
powersave
powersave
powersave
powersave
powersave
powersave
powersave
powersave
root@daq01:~#
  • Change governor to "performance":
root@daq01:~# cpupower frequency-set --governor performance
Setting cpu: 0
Setting cpu: 1
Setting cpu: 2
Setting cpu: 3
Setting cpu: 4
Setting cpu: 5
Setting cpu: 6
Setting cpu: 7
root@daq01:~# cat /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor
performance
performance
performance
performance
performance
performance
performance
performance
root@daq01:~# cpupower frequency-info
analyzing CPU 0:
  driver: intel_pstate
  CPUs which run at the same hardware frequency: 0
  CPUs which need to have their frequency coordinated by software: 0
  maximum transition latency:  Cannot determine or is not supported.
  hardware limits: 800 MHz - 4.00 GHz
  available cpufreq governors: performance powersave
  current policy: frequency should be within 800 MHz and 4.00 GHz.
                  The governor "performance" may decide which speed to use
                  within this range.
  current CPU frequency: Unable to call hardware
  current CPU frequency: 3.93 GHz (asserted by call to kernel)
  boost state support:
    Supported: yes
    Active: yes
  • monitor CPU frequency:
root@daq01:~# cpupower monitor
    | Nehalem                   || Mperf              || Idle_Stats                                     
 CPU| C3   | C6   | PC3  | PC6   || C0   | Cx   | Freq  || POLL | C1   | C1E  | C3   | C6   | C7s  | C8    
   0|  0.00|  0.00|  0.00|  0.00|| 88.80| 11.20|  3973||  0.00|  0.00|  0.01|  0.02|  0.31|  0.00|  4.25
   4|  0.00|  0.00|  0.00|  0.00||  4.70| 95.30|  3945||  0.00|  0.00|  0.00|  0.00|  0.00|  0.00| 95.03
   1|  0.73|  3.70|  0.00|  0.00||  4.52| 95.48|  3864||  0.00|  0.01|  1.19|  0.44|  2.82|  0.00| 90.23
   5|  0.73|  3.70|  0.00|  0.00||  0.37| 99.63|  3807||  0.00|  0.00|  0.03|  0.09|  1.70|  0.00| 97.64
   2|  2.28| 12.86|  0.00|  0.00||  1.41| 98.59|  3829||  0.00|  0.86|  3.17|  0.46|  7.70|  0.00| 85.87
   6|  2.28| 12.86|  0.00|  0.00||  2.88| 97.12|  3856||  0.00|  0.11|  4.56|  2.15| 10.31|  0.00| 78.99
   3|  1.33|  4.81|  0.00|  0.00||  0.99| 99.01|  3804||  0.00|  0.49|  0.79|  0.01|  1.03|  0.00| 96.12
   7|  1.34|  4.81|  0.00|  0.00||  1.26| 98.74|  3818||  0.00|  0.01|  2.32|  0.47|  5.02|  0.00| 90.06
root@daq01:~#
  • check that the CPU is not overheating:
root@daq01:~# sensors
coretemp-isa-0000
Adapter: ISA adapter
Package id 0:  +51.0°C  (high = +84.0°C, crit = +100.0°C)
Core 0:        +51.0°C  (high = +84.0°C, crit = +100.0°C)
Core 1:        +38.0°C  (high = +84.0°C, crit = +100.0°C)
Core 2:        +34.0°C  (high = +84.0°C, crit = +100.0°C)
Core 3:        +32.0°C  (high = +84.0°C, crit = +100.0°C)
  • congratulations, we are running at 4 GHz now!

Setup ubuntu as gateway to private network

See also:

Steps to do

!!! UPDATED 16feb2024 Ubuntu-22.04.03 !!!

  • assign network numbers to the private network, i.e. 192.168.1.x, 192.168.2.x, etc
  • (on the gateway machine, each private network interface has to have a different network number)
  • (each network interface can have multiple networks attached, via VLANs or via eth0:0, eth0:1 constructs)
  • assign IP addresses on the private network, save them in /etc/hosts i.e. "hvps 192.168.1.10"
  • (for simplicity, assign 192.168.1.1 to the gateway machine itself)
  • (IP addresses 192.168.1.0 and 192.168.1.255 are "special", do not use them)
  • setup DNS server (dnsmasq) to serve contents of /etc/hosts via DNS (otherwise, many programs will see inconsistent name to IP address mapping)
  • setup DHCP server (dnsmasq) to give out the IP addresses
  • setup TFTP server (dnsmasq), pxelinux and NFS for diskless booting
  • setup time server (chronyd) to provide common time to all devices
  • setup NAT so machines on private network can access the internet (to get OS updates, etc)
  • setup NIS and NFS so machines on the private network can use common home directories
  • setup rsync backup of machines on the private network

setup hosts

  • edit /etc/hosts
192.168.1.101 dsfe01
... and so forth

setup dns and dhcp

!!! updated 16feb2024 for Ubuntu 22.04.3 !!!

!!! note: stock systemd-resolved remains, is configured to forward queries to dnsmasq, configured to forward queries to TRIUMF DNS !!!

!!! note: per authors of systemd, bare hostnames are not permitted, a DNS domain name must always be used. DNS domain name "dsdaq" is used in this example !!!

  • apt install dnsmasq
  • ensure dnsmasq starts after all interfaces are up (Ubuntu-22)
mkdir /etc/systemd/system/dnsmasq.service.d
echo -e "[Unit]\nAfter=network-online.target\n" > /etc/systemd/system/dnsmasq.service.d/local.conf
  • edit /etc/dnsmasq.conf
# /etc/dnsmasq.conf
# DNS settings 
#port=0 # disable DNS function 
port=53 # enable DNS function 
bind-interfaces # do not collide with systemd-resolved, we use 127.0.0.1:53, they use 127.0.0.53:53 
domain-needed 
bogus-priv 
no-resolv 
#log-queries # log DNS quesries 
 
# TRIUMF DNS settings 
 
server=142.90.100.19 
expand-hosts 
domain=dsdaq 
local=/dsdaq/ 
localmx # do not forward MX queries to TRIUMF 

# DHCP settings 
interface=enp1s0f0 # VX network 192.168.0.x 
#interface=missing  # FEP and TSP network 192.168.1.x 
interface=enp1s0f1 # controls network 192.168.2.x 
#dhcp-range=192.168.1.50,192.168.1.150,infinite 
dhcp-range=192.168.0.0,static 
dhcp-range=192.168.2.0,static 
log-dhcp # log DHCP queries 
#quiet-dhcp 
dhcp-ignore=tag:!known 
#dhcp-boot=pxelinux.0 
 
dhcp-option=option:dns-server,192.168.0.248 
dhcp-option=option:ntp-server,192.168.0.248 
 
# TFTP settings 
 
enable-tftp 
tftp-root=/tftpboot
  • #mkdir /tftpboot ### per tftp-root (if no ZFS)
  • zfs create -o mountpoint=/tftpboot rpool/tftpboot ### (if root is ZFS)
  • create resolved-dsdaq.conf with main IP address of dnsmasq
[Resolve]
DNS=192.168.0.248
Domains=dsdaq triumf.ca
  • mkdir -p /etc/systemd/resolved.conf.d/
  • /bin/rm -f /etc/systemd/resolved.conf.d/*.conf
  • cp resolved-dsdaq.conf /etc/systemd/resolved.conf.d/
  • systemctl stop systemd-resolved.service
  • systemctl disable systemd-resolved.service
  • systemctl enable dnsmasq
  • systemctl restart dnsmasq
  • try to "ping" or "host" some names from /etc/hosts, it should work
  • try to ping daq00, daq00.triumf.ca, all should work
  • resolved-dsdaq.conf goes into /etc/systemd/resolved.conf.d/ of all machines on the private network
  • if not using systemd-resolved, edit /etc/resolv.conf

setup chronyd

  • enable ntp server:
  • disable systemd-timesyncd, configure and enable chronyd per instructions above
  • create dsdaq.conf
# chrony config for dsdaq server

#allow 192.168.0.0
#allow 192.168.1.0
#allow 192.168.2.0
allow all

# end
  • cp dsdaq.conf /etc/chrony/conf.d/
  • systemctl restart chronyd
  • chronyc tracking ### wait until time is synchronized (a few seconds)
  • create dsdaq.sources # use hostname or IP address of chronyd server
# Put this file in /etc/chrony/sources.d
# systemctl restart chrony
# chronyc sources
# chronyc tracking
server dsdaqgw iburst prefer
# end
  • dsdaq.sources goes to /etc/chrony/sources.d of all machines on the private network

setup diskless network booting

setup pxelinux for legacy pxe boot

  • add bits in dnsmasq.conf
dhcp-host=ac:1f:6b:9e:7f:4a,dsfe01,infinite
dhcp-boot=pxelinux.0
dhcp-option=17,"192.168.0.251:/nfsroot/%s,vers=3"
  • setup pxelinux for Ubuntu-18
cd ~
wget https://www.kernel.org/pub/linux/utils/boot/syslinux/4.xx/syslinux-4.03.tar.bz2
tar xjvf syslinux-4.03.tar.bz2
cd syslinux-4.03
cp -pv ./core/pxelinux.0 ./com32/hdt/hdt.c32 ./memdisk/memdisk ./com32/menu/menu.c32 /zssd/tftpboot/
  • cd /zssd/tftpboot
wget http://ladd00.triumf.ca/tftpboot/memtest86+-4.20.iso.zip
wget http://ladd00.triumf.ca/tftpboot/memtest86+-5.01.iso.gz
wget http://ladd00.triumf.ca/tftpboot/modules.alias
wget http://ladd00.triumf.ca/tftpboot/modules.pcimap
wget http://ladd00.triumf.ca/tftpboot/pci.ids
  • mkdir pxelinux.cfg
  • emacs -nw pxelinux.cfg/default
default menu.c32
prompt 0

menu title Welcome to the DSVSLICE PXE boot menu

timeout 50

label hdt
  kernel hdt.c32

label memtest86+-5.01 
  kernel memdisk iso initrd=memtest86+-5.01.iso.gz 

label memtest86+-4.20
  kernel memdisk iso initrd=memtest86+-4.20.iso.zip

label vmlinuz-5.3.0-26-generic
  menu default
  kernel vmlinuz-5.3.0-26-generic
  append initrd=initrd.img-5.3.0-26-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.1.1:/zssd/nfsroot/dsfe01 toram ip=dhcp panic=60 BOOTIF=enp1s0f0

#end

setup pxelinux for efi pxe boot

# uefi pxe

dhcp-boot=tag:uefipxe,uefi/syslinux.efi
dhcp-option-force=tag:fe01,option:root-path,192.168.0.248:/nfsroot/fe01

# VX network 192.168.0.x

dhcp-host=40:a6:b7:c1:d9:c5,fe01,infinite,set:uefipxe,set:fe01
  • apt install syslinux pxelinux syslinux-common syslinux-efi syslinux-utils
mkdir /tftpboot/uefi
cp /usr/lib/SYSLINUX.EFI/efi64/syslinux.efi /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/ldlinux.e64 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/menu.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/hdt.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libutil.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libmenu.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libcom32.c32 /tftpboot/uefi/
cp /usr/lib/syslinux/modules/efi64/libgpl.c32 /tftpboot/uefi/
  • try to boot, it should bomb with "cannot load pxelinux.cfg/default"
  • mkdir /tftpboot/uefi/pxelinux.cfg
  • create /tftpboot/uefi/pxelinux.cfg/default, note nfsroot path is hardwired, note "http:" is used to load vmlinuz and initrd files (because tftp is super slow)
default menu.c32
prompt 0

menu title Welcome to the DSDAQGW UEFI PXE boot menu

timeout 50

label vmlinuz-6.5.0-17-generic
  kernel http://192.168.0.248:8088/uefi/vmlinuz-6.5.0-17-generic
  append initrd=http://192.168.0.248:8088/uefi/initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=auto rw ip=dhcp panic=60

# append initrd=http://192.168.0.248:8088/uefi/initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.0.248:/nfsroot/fe01 rw ip=dhcp panic=60

#  append initrd=initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=192.168.0.248:/nfsroot/fe01 rw ip=dhcp panic=60
#  append initrd=initrd.img-6.5.0-17-generic boot=nfs root=/dev/nfs netboot=nfs nfsroot=auto ip=dhcp rw panic=60

#end

apt install mini-httpd
emacs -nw /etc/default/mini-httpd # set "START=1"
emacs -nw /etc/mini-httpd.conf # set "host=192.168.0.248", "port=8088", "data_dir=/tftpboot"
mkdir /etc/systemd/system/mini-httpd.service.d
echo -e "[Unit]\nAfter=network-online.target\n" > /etc/systemd/system/mini-httpd.service.d/local.conf
systemctl enable mini-httpd
systemctl restart mini-httpd
systemctl status mini-httpd
wget http://192.168.0.248:8088/uefi/syslinux.efi
tail -100 /var/log/mini_httpd.log
  • fix initramfs bug for "nfsroot=auto", otherwise, "nfsroot=" has to be different for each machine and you have to have separate pxelinux config files for each machine
    • emacs -nw /usr/lib/initramfs-tools/etc/dhcp/dhclient-enter-hooks.d/config
    • add "echo ROOTPATH=..." if it is missing (Ubuntu LTS 22.04)
                echo "ROOTSERVER='${new_routers%% *}'" 
                echo "ROOTPATH='$new_root_path'" 
                echo "HOSTNAME='$new_host_name'" 

mkinitramfs 6.5.0-18-generic
  • copy linux kernel and initrd
cp /boot/vmlinuz-6.5.0-18-generic /tftpboot/uefi/
cp /boot/initrd.img-6.5.0-18-generic /tftpboot/uefi/
chmod a+r /tftpboot/uefi/*
  • try to boot, should bomb with messages about "trying to mount root filesystem"
  • tail /var/log/syslog
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 vendor class: PXEClient:Arch:00007:UNDI:003016
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 1:netmask, 2:time-offset, 3:router, 4, 5, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 6:dns-server, 12:hostname, 13:boot-file-size, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 15:domain-name, 17:root-path, 18:extension-path, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 22:max-datagram-reassembly, 23:default-ttl, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 28:broadcast, 40:nis-domain, 41:nis-server, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 42:ntp-server, 43:vendor-encap, 50:requested-address, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 51:lease-time, 54:server-identifier, 58:T1, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 59:T2, 60:vendor-class, 66:tftp-server, 67:bootfile-name, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 97:client-machine-id, 128, 129, 130, 131, 
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 132, 133, 134, 135
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 next server: 192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 broadcast response
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  1 option: 53 message-type  2
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 18 option: 67 bootfile-name  uefi/syslinux.efi
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 12 hostname  fe01
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:43:02 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 vendor class: PXEClient:Arch:00007:UNDI:003016
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 1:netmask, 2:time-offset, 3:router, 4, 5, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 6:dns-server, 12:hostname, 13:boot-file-size, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 15:domain-name, 17:root-path, 18:extension-path, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 22:max-datagram-reassembly, 23:default-ttl, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 28:broadcast, 40:nis-domain, 41:nis-server, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 42:ntp-server, 43:vendor-encap, 50:requested-address, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 51:lease-time, 54:server-identifier, 58:T1, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 59:T2, 60:vendor-class, 66:tftp-server, 67:bootfile-name, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 97:client-machine-id, 128, 129, 130, 131, 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 requested options: 132, 133, 134, 135
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 next server: 192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 broadcast response
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  1 option: 53 message-type  5
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 18 option: 67 bootfile-name  uefi/syslinux.efi
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 12 hostname  fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065885 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: error 8 User aborted the transfer received from 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/syslinux.efi to 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/syslinux.efi to 192.168.0.110
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 requested options: 1:netmask, 3:router, 6:dns-server
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 bootfile name: uefi/syslinux.efi
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 next server: 192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 broadcast response
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  1 option: 53 message-type  2
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:05 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 requested options: 1:netmask, 3:router, 6:dns-server
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 bootfile name: uefi/syslinux.efi
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 next server: 192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 broadcast response
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  1 option: 53 message-type  5
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:43:09 dsdaqgw dnsmasq-dhcp[3629416]: 2348065887 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/ldlinux.e64 to 192.168.0.110
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/01-40-a6-b7-c1-d9-c5 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8006E not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8006 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A800 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A80 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A8 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0A not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C0 not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: file /tftpboot/uefi/pxelinux.cfg/C not found
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/pxelinux.cfg/default to 192.168.0.110
Feb 16 20:43:09 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/menu.c32 to 192.168.0.110
Feb 16 20:43:10 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/libutil.c32 to 192.168.0.110
Feb 16 20:43:10 dsdaqgw dnsmasq-tftp[3629416]: sent /tftpboot/uefi/pxelinux.cfg/default to 192.168.0.110
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 client provides name: dsdaqgw.triumf.ca
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPDISCOVER(enp1s0f0) 40:a6:b7:c1:d9:c5 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPOFFER(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 1:netmask, 28:broadcast, 2:time-offset, 3:router, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 15:domain-name, 6:dns-server, 119:domain-search, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 12:hostname, 44:netbios-ns, 47:netbios-scope, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 26:mtu, 121:classless-static-route, 42:ntp-server
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 bootfile name: uefi/syslinux.efi
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 next server: 192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  1 option: 53 message-type  2
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 available DHCP subnet: 192.168.0.0/255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 client provides name: dsdaqgw.triumf.ca
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPREQUEST(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 tags: uefipxe, fe01, known, enp1s0f0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 DHCPACK(enp1s0f0) 192.168.0.110 40:a6:b7:c1:d9:c5 fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 1:netmask, 28:broadcast, 2:time-offset, 3:router, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 15:domain-name, 6:dns-server, 119:domain-search, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 12:hostname, 44:netbios-ns, 47:netbios-scope, 
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 requested options: 26:mtu, 121:classless-static-route, 42:ntp-server
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 bootfile name: uefi/syslinux.efi
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 next server: 192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  1 option: 53 message-type  5
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 54 server-identifier  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 51 lease-time  infinite
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  1 netmask  255.255.255.0
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 28 broadcast  192.168.0.255
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  3 router  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  5 option: 15 domain-name  dsdaq
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 12 hostname  fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size: 27 option: 17 root-path  192.168.0.248:/nfsroot/fe01
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option: 42 ntp-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw dnsmasq-dhcp[3629416]: 3693523458 sent size:  4 option:  6 dns-server  192.168.0.248
Feb 16 20:44:54 dsdaqgw rpc.mountd[3350210]: authenticated mount request from 192.168.0.110:981 for /nfsroot/fe01 (/nfsroot/fe01)
Feb 16 20:45:07 dsdaqgw rpc.mountd[3350210]: authenticated unmount request from 192.168.0.110:859 for /nfsroot/fe01/tmp/autoDY4k5u (/nfsroot/fe01)
  • tail /var/log/mini_httpd.log
192.168.0.110 - - [16/Feb/2024:20:43:15 -0800] "GET /uefi/vmlinuz-6.5.0-17-generic HTTP/1.0" 200 14227944 "" "Syslinux/6.04"
192.168.0.110 - - [16/Feb/2024:20:43:24 -0800] "GET /uefi/initrd.img-6.5.0-17-generic HTTP/1.0" 200 137824833 "" "Syslinux/6.04"

setup efi http boot

https://documentation.suse.com/sles/15-SP2/html/SLES-all/cha-deployment-prep-uefi-httpboot.html

setup linux kernel

  • copy the kernel files
cd /boot
rsync -av config* initrd* System.map* vmlinuz* /tftpboot/
  • cd /tftpboot
  • chmod a+r *

setup nfs

  • apt-get install nfs-kernel-server
  • enable NFS over UDP, edit /etc/nfs.conf add "udp=y":
udp=y

systemctl restart nfs-server.service
  • emacs -nw /etc/exports
/nfsroot/dsfe01 dsfe01(rw,no_root_squash,async,no_subtree_check)
  • enable services
systemctl enable nfs-server
systemctl enable nfs-mountd
systemctl enable nfs-idmapd
systemctl restart nfs-server
systemctl restart nfs-mountd
systemctl restart nfs-idmapd
  • after editing /etc/exports, run
exportfs -av

setup userland

!!! ubuntu-18 version !!!

  • zfs create rpool/nfsroot
  • zfs set dedup=verify rpool/nfsroot ### enable deduplication to save disk space because most linux images have mostly identical files
  • clone ubuntu
mkdir /nfsroot/dsfe01
cd /
rsync -avx . /nfsroot/dsfe01
  • edit config files:
  • cd /nfsroot/dsfe01
  • emacs -nw etc/hostname ### change to dsfe01
  • emacs -nw etc/mailname ### change to dsfe01
  • emacs -nw etc/yp.conf ### change daq00.triumf.ca to musr00.triumf.ca
  • emacs -nw etc/defaultdomain ### change to MUSR-NIS
  • cp -pvf ../lxcpet-SL610/etc/ssh/*key* etc/ssh/ ### preserve the ssh keys
  • emacs -nw opt/gonodeinfo/gonodeinfo.conf ### update information
  • emacs -nw root/.ssh/authorized_keys ### update root ssh keys
  • emacs -nw etc/fstab ### add this
192.168.1.1:/nfsroot/dsfe01 / nfs defaults,nolock 0 0
  • emacs -nw etc/chrony/chrony.conf
    • comment-out all "pool" and "server" entries
    • add entry "server 192.168.1.1 iburst"

After dsfe01 is booted:

  • disable services:
systemctl disable apache2
systemctl disable dnsmasq
systemctl disable zfs-import-cache

To setup additional machines, clone dsfe01 instead of cloning the gateway machine

Allow manpages to be viewed

If / is mounted over NFS, man will report a permission error. Fix it with: 

ln -s /etc/apparmor.d/usr.bin.man /etc/apparmor.d/disable/
apparmor_parser -R /etc/apparmor.d/usr.bin.man

setup shared home directory

on the gateway machine

  • define netgroups
  • emacs -nw /etc/netgroup
dsfe (dsfe01,,) (dsfe02,,)
  • emacs -nw /etc/nsswitch.conf ### edit the netgroup line to read:
netgroup: files
  • export the home directories:
  • emacs -nw /etc/exports ### add this:
/zssd/home1 @dsfe(rw,no_root_squash,async,no_subtree_check)
  • exportfs -rc

on the frontend machine

  • mkdir /home
  • emacs -nw /etc/fstab ### add this:
192.168.1.1:/zssd/home1 /home nfs defaults 0 0
  • mount -a

setup NAT

NAT allows machines on the private network to connect to the internet: https://en.wikipedia.org/wiki/Network_address_translation

In these examples:

  • replace "eno1" with name of the outgoing interface (the one connected to the TRIUMF network).
  • replace "enp11s0" with name of the private network interface (192.168.1.x network)
  • emacs -nw /etc/rc.local ### add this:
# /etc/rc.local

# enable NAT

/sbin/iptables -t nat -A POSTROUTING -o eno1 -j MASQUERADE
iptables -L -v

# uncomment following lines if machine has prohibitive FORWARD rules:
#/sbin/iptables -I FORWARD -i eno1 -o enp11s0 -m state --state RELATED,ESTABLISHED -j ACCEPT
#/sbin/iptables -I FORWARD -i enp11s0 -o eno1 -j ACCEPT
#iptables -L -v

iptables -L -v
sysctl -w net.ipv4.ip_forward=1
#sysctl -a | grep forward

sh /etc/firewall-rfc1918.sh

# end
  • emacs -nw /etc/firewall-rfc1918.sh
# firewall-rfc1918.sh

# prevent RFC1918 private network IP addresses from
# going in and out from our uplink.

ETH=eno1

iptables -F in-rfc1918
iptables -N in-rfc1918
iptables -A in-rfc1918 --dst 10.0.0.0/8      -j REJECT
iptables -A in-rfc1918 --dst 172.16.0.0/12   -j REJECT
iptables -A in-rfc1918 --dst 192.168.0.0/16  -j REJECT

iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -D INPUT -j in-rfc1918 -i $ETH
iptables -I INPUT -j in-rfc1918 -i $ETH

iptables -F out-rfc1918
iptables -N out-rfc1918
iptables -A out-rfc1918 --dst 10.0.0.0/8      -j REJECT
iptables -A out-rfc1918 --dst 172.16.0.0/12   -j REJECT
iptables -A out-rfc1918 --dst 192.168.0.0/16  -j REJECT

iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -D OUTPUT -j out-rfc1918 -o $ETH
iptables -I OUTPUT -j out-rfc1918 -o $ETH

iptables -D FORWARD -j out-rfc1918 -o $ETH 
iptables -D FORWARD -j out-rfc1918 -o $ETH 
iptables -I FORWARD -j out-rfc1918 -o $ETH 

# allow TRIUMF-SECURE network

iptables -I in-rfc1918 -s 10.90.0.0/255.255.0.0 -j ACCEPT 
iptables -I out-rfc1918 -d 10.90.0.0/255.255.0.0 -j ACCEPT 

# show configuration

iptables -L -v

#end

KVM

apt install cpu-checker

root@daq13:~# kvm-ok 
INFO: /dev/kvm exists
KVM acceleration can be used
root@daq13:~# 

(if not, shutdown, go into BIOS settings, enable CPU virtualization)

apt install virtinst ### will install many packages
apt install libvirt-clients libvirt-daemon-system-systemd libvirt-daemon qemu qemu-kvm libvirt-daemon-system virtinst bridge-utils

root@daq13:/home1/wheel# virsh list --all
 Id   Name           State
------------------------------
 1    ubuntu-guest   running

apt install virt-manager

virt-install --name ubuntu-guest --os-variant ubuntu20.04 --vcpus 2 --ram 2048 --location /daq/daqstore/olchansk/linux/Ubuntu/ubuntu-20.04.3-desktop-amd64.iso --network bridge=virbr0,model=virtio --graphics none --extra-args='console=ttyS0,115200n8 serial'

virtual machine will start, boot, etc
to get out of it, CTRL + Shift followed by ]

ssh wheel@daq13
virt-manager

run virt-install again, omit "--graphics none", open graphics console from virt-manager, it booted into ubuntu installer desktop

virt-install --name test10 --os-variant centos6.10 --vcpus 2 --ram 2048 --import --filesystem /kvm_ladd00,/ --network bridge=virbr0,model=virtio --boot kernel=/kvm_ladd00/boot/vmlinuz-2.6.32-754.35.1.el6.x86_64,initrd=/kvm_ladd00/boot/initramfs-2.6.32-754.35.1.el6.x86_64.img,kernel_args="root=/dev/sda console=ttyS0,115200n8 serial" --graphics none

virt-install --name test14 --os-variant centos6.10 --vcpus 2 --ram 2048 --import --disk /tmp/xxx/ladd00.img,bus=sata --network bridge=virbr0,model=virtio --boot kernel=/kvm_ladd00/boot/vmlinuz-2.6.32-754.35.1.el6.x86_64,initrd=/kvm_ladd00/boot/initramfs-2.6.32-754.35.1.el6.x86_64.img,kernel_args="root=/dev/sda console=ttyS0,115200n8 serial rdshell" --graphics none --check path_in_use=off

build image 

dd if=/dev/zero of=/tmp/xxx/ladd00.img bs=1024M count=20
mkfs.ext3 /tmp/xxx/ladd00.img ### ext4 fails to mount by SL6 kernel, "unknown ext4 options"
cd /kvm_ladd00/
mount -o loop /tmp/xxx/ladd00.img /mnt/tmp
rsync -av . /mnt/tmp/ --delete
umount /mnt/tmp

on the guest, configure network: /etc/rc.local 

#!/bin/sh
#
# This script will be executed *after* all the other init scripts.
# You can put your own initialization stuff in here if you don't
# want to do the full Sys V style init stuff.

touch /var/lock/subsys/local

ifconfig eth2 192.168.122.2
route add -net 0.0.0.0 gw 192.168.122.1
ifconfig -a
netstat -rn

# end

ARM cross-compiler

NOTE!!!

THIS IS NOT AN AARCH64 (arm64) CROSSCOMPILER!

NOTE!!!

  • install packages:
apt install libgcc-9-dev-arm64-cross
apt install gcc-arm-linux-gnueabi
apt install gcc-arm-linux-gnueabihf
apt install g++-arm-linux-gnueabihf
apt install g++-arm-linux-gnueabi
  • find out the correct -march setting, on the target machine, run:
root@gdm00:~# g++ -Q --help=target | grep march
  -march=                     		armv8-a



arm-linux-gnueabi-gcc -o ttcp1 ttcp.c -march=armv7 -static
arm-linux-gnueabi-gcc -o memcpy.armv7 memcpy.cc -march=armv7 -static -O2

32-bit intel cross-compiler

Ubuntu 22.04: 

apt install libstdc++-11-dev:i386
apt install zlib1g-dev:i386

NOTES:

  • "g++ -m32" does not find libstdc++, please use "g++ -m32 -L/usr/lib/gcc/i686-linux-gnu/11/"
  • to cross-build 32-bit MIDAS, use "make linux32".
  • executables cross-build on Ubuntu-22 do NOT run on 32-bit Debain-11 (GLIBC and GLIBCXX version mismatch)
  • executables cross-build on Ubuntu-22 run on 32-bit Debian-12.
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