> I guess we should follow the "standard" as much as possible. MIDASSYS was inspired by
> ROOTSYS. Now where do people usually install ROOT? Is it /opt/root-x.x.x or something
> else. Some years ago (when I did the last time some linux administration) optional
> packages were put into /usr/local by default. I guess you have more experience with
> today's tradition, so do whatever you thing is standard.
I agree that we should follow the standard. 
I used /opt as an example. 
There are several "schools" as to where put things my philosophy is
/usr/{bin,lib,include}       - std OS packages (RPMS, .deb or whatever your flavor likes)
/usr/local/{bin,lib,include} - make/make install packages
/opt/..                      - additional packages (RPMS, ...) 

But it should be up to the user what $MIDASSYS she/he likes.

> 
> > so the Linux binaries would go to 
> > MIDASHOST=i386-pc-linux-gnu
> > $MIDASSYS/$MIDASHOST/bin
> > $MIDASSYS/$MIDASHOST/lib
> 
> Does that mean that the path has to be modified to include $MIDASSYS/$MIDASHOST/bin?
> If we put a link to /usr/local/bin, the path does not have to be modified. What about
> shared libraries? Does ldconfig know about /usr/local/lib, or $MIDASYS/$MIDASHOST/lib?
The path could/should be modified in users .bashrc/.tcshrc or we could provide a simple
system-wide script(s) that would do the job.
For years, I've been using such a scenario on my Linux PCs with regards to various
add-on packages (e.g. cern). 

Here's an example of my cern.sh that goes into /etc/profile.d on my RedHat Linux PC
#===================================
. /etc/profile.d/.functions
export CERN=/cern
export CERN_LEVEL=pro
addpath $CERN/$CERN_LEVEL/bin
#===================================

As for library path: there are several ways (as with exec path)
a) nice way: modify /etc/ld.so.conf by adding $MIDASYS/$MIDASHOST/lib
b) modifying LD_LIBRARY_PATH (there's some security issues with it)
c) symlinking to /usr/local/lib


> 
> What about /usr/share? Is that a common place for documentatino etc?
Yes. Check any recent Linux distribution /usr/share is full of docs, icons, etc.

This is my bias. 

I (obviously) prefer packing things into rpm which makes install/updates 
very easy - especially if you are managing several machines.

Cheers
    Piotr