> We also agree and found the problem now.

Good. what was wrong?

> - Own DMA engine since we are doing burst writing DMA with PCIe 3.0. 
> - Own device driver

Scary stuff.

> - no interrupts 

Right. Best I can tell, interrupts no longer useful in Linux - interrupt handler cannot do any real work, has to hand off to a kernel thread, resulting
in so much latency and overhead that one might as well poll for the data... And for DMA data transfers, the data rate is well known,
so easy to predict how long the DMA will run for and sleep for that amount of time instead of waiting for an interrupt.

K.O.