ID |
Date |
Author |
Topic |
Subject |
665
|
20 Oct 2009 |
Peter Simpson | Forum | Midas in linux |
Hi,
I'm new to both Linux and Midas and having trouble installing the programme -
the install file suggeats that I should have a directory:
midas/unix
but this doesn't appear.
Also, when running the "make" for the library (step 3 of the installation), I
don't see the directory "zlib.a", but there is a "libz.a" and I note the
original .tar file has no libz.a file in it. Is this a typo on the
installation?
The terminal window at this point displays:
undefined reference to `errno'
make: ***[example] Error 1
Further help will no doubt be required as I've used windows throughout my
research and now looking to learn how to use linux. Any help greatly
appreciated. Thanks! |
664
|
19 Oct 2009 |
Exaos Lee | Forum | It' better to fix this warnings |
> There is no "type conversions". The compiler is whining about code like this:
>
> /* data type names */
> static char *tid_name[] = {
> "NULL",
> "BYTE",
> ...
>
> I guess we should keep the compiler happy and make them "static const char*".
>
> BTW, my compiler is SL5.2 gcc-4.1.2 and it does not complain. What's your compiler?
>
> K.O.
When I use "make" with odbedit, the generated "experim.h" also contains such codes as:
#define EXPCVADC_COMMON_STR(_name) char *_name[] = {\
"[.]",\
...
This will cause "type conversion" warnings. I hope that "odbedit" can generate codes like this:
#define EXPCVADC_COMMON_STR(_name) const char *_name[] = {\
"[.]",\
...
In fact, "const char*" is enough to suppress the warnings. Using "const char* foo=\"blarblar\"" is a good habit because it can avoid the following bugs:
char *s = "whatever";
...
strcpy(s, "Hello, this is a string longer than the initial one.");
The above code can successfully generate an executable, but it will encounter segmentation fault while executing. "const char*" means we should not change the variable in other place, which is important to suppress bugs.
Another problem, if I change the "experim.h" as I wished, new warnings appeared when the compiler parsing the following code:
status = db_create_record(hDB, 0, set_str, strcomb(expcvadc_settings_str));
Warning:
cvadcfe.c: In function ‘frontend_init’:
cvadcfe.c:144: warning: passing argument 1 of ‘strcomb’ from incompatible pointer type
|
663
|
15 Oct 2009 |
Exaos Lee | Suggestion | Building MIDAS using CMake |
The attached zip file is the updated configurations for building MIDAS using CMake. It works with svn-r4604.
If you want to use it, please follow the steps here:
Quote: |
- Unzip the attachment, copy CMakeLists.txt and directory "cmake" into the midas source tree.
$ cp -rp CMakeLists.txt cmake/ <Path-to-MIDAS-tree>/ - Make a build dir, and change to it.
- Execute cmake as this
$ cmake -DCMAKE_INSTALL_PREFIX=<path-to-install> <path-to-MIDAS-tree> - Make and install
|
You may use 'cmake -G <generator-name>' to generate building files for Unix Makefiles, Eclipse CDT4, KDevelop3 or Xcode, etc. I didn't test with other platforms. It now works with Unix Makefiles under Linux system. Please feedback any bugs to me: Exaos.Lee(AT)gmail.com . |
662
|
11 Oct 2009 |
Konstantin Olchanski | Info | SQL history documentation |
> Documentation for writing midas history data to SQL (mysql) is now documented in midas doxygen files
> (make dox; firefox doxfiles/html/index.html). The corresponding logger and mhttpd code has been
> committed for some time now and it is used in production environment by the t2k/nd280 slow controls
> daq system at TRIUMF.
> svn rev 4487
An updated version of the SQL history code is now committed to midas svn.
The new code is in history_sql.cxx. It implements a C++ interface to the MIDAS history (history.h),
and improves on the old code history_odbc.cxx by adding:
- an index table for remembering MIDAS names of SQL tables and columns (our midas users like to use funny characters in history
names that are not permitted in SQL table and column names),
- caching of database schema (event names, etc) with a noticeable speedup of mhttpd (there is a new button on the history panel editor
"clear history cache" to make mhttpd reload the database schema.
The updated documentation for using SQL history is committed to midas svn doxfiles/internal.dox (svn up; make dox; firefox
doxfiles/html/index.html), or see my copy on the web at
http://ladd00.triumf.ca/~olchansk/midas/Internal.html#History_sql_internal
svn rev 4595
K.O. |
661
|
11 Oct 2009 |
Konstantin Olchanski | Bug Report | Multiple definition of `SqlODBC::SqlODBC() |
> > Why is the class "SqlODBC" duplicated?
>
> This is interesting. I do not think my C++ book spells it out that I cannot have class A in foo.cxx
> and a class A in bar.cxx.
I guess nobody knows the answer to this C++ puzzle. In any case history_odbc.cxx is not used anymore removing duplication of class SqlODBC.
svn rev 4594
K.O. |
660
|
11 Oct 2009 |
Konstantin Olchanski | Bug Report | change to building and linking libmidas.so, mserver linking fails when using shared library |
> > > $(CXX) -shared -o $@ $^ $(LIBS) -lc
Done.
MIDAS shared library renamed from libmidas.so to libmidas-shared.so and always build on Linux (.so) and MacOS (.dylib and .so bundle).
Users who wish to link their applications to the shared library should change their Makefile from "gcc ... -lmidas" to "gcc ... -lmidas-shared".
MIDAS core applications (mhttpd, mlogger, etc) are linked to the static library to permit multiple versions of midas to be used
at the same time (LD_LIBRARY_PATH should point to the shared library for *which* midas?!?), avoid problems with wrong setting
of LD_LIBRARY_PATH and to avoid problems with version skew (which we found unavoidable once a midas daq is used for a year or
more - main reason we gave up on using the midas shared library in the first place).
svn rev 4594
K.O. |
659
|
11 Oct 2009 |
Konstantin Olchanski | Bug Report | Building error of history_midas.cxx due to missing declaration |
> The "g++" is whining while compiling history_midas.cxx. Please see the attached log file.
Fixed. svn 4594. K.O. |
658
|
09 Oct 2009 |
Exaos Lee | Bug Report | Building error of history_midas.cxx due to missing declaration |
Platform: Debian Linux testing
Compiler: gcc 4.3.4 (Debian 4.3.4-2)
Arch: x86
Description:
The "g++" is whining while compiling history_midas.cxx. Please see the attached log file.
This can be fixed by add "#include <cstdlib>" to the C++ source. You know, different versions
of g++ don't act the same way. I think, maybe in version 4.2 or before, g++ can automatically
include the C header "stdlib.h" (which in C++ should be <cstdlib> because of some confusion
between C and C++), but not in version 4.3 or later. I tested g++-4.4, the problem still exists.
And g++-4.2 gives no error.
|
657
|
09 Oct 2009 |
Konstantin Olchanski | Bug Report | Multiple definition of `SqlODBC::SqlODBC() |
> Linking CXX shared library lib/libmidas.so
/usr/bin/c++ ... -o lib/libmidas.so ... CMakeFiles/midas-shared.dir/src/history_odbc.cxx.o
CMakeFiles/midas-shared.dir/src/history_sql.cxx.o
CMakeFiles/midas-shared.dir/src/history_sql.cxx.o: In function `SqlODBC':
/opt/DAQ/repos/bot/midas/src/history_sql.cxx:200: multiple definition of `SqlODBC::SqlODBC()'
CMakeFiles/midas-
shared.dir/src/history_odbc.cxx.o:/opt/DAQ/repos/bot/midas/src/history_odbc.cxx:315: first defined
here
> Why is the class "SqlODBC" duplicated?
This is interesting. I do not think my C++ book spells it out that I cannot have class A in foo.cxx
and a class A in bar.cxx. In fact I already discovered that the two classes A will collide (duplicate default
constructor A::A, even if all other member functions are different) if I link an executable that uses both
foo.o and bar.o.
Is there a way around this problem? In C, I can declare functions and variables "static" to "hide" them
from the linker.
What is the C++ equivalent for classes? (Any C++ experts here?)
In this specific case, the file history_odbc.cxx will disappear with the next commit of mhttpd, hopefully
today. mlogger and mh2sql already do not use it.
And I will commit the Makefile change renaming libmidas.so to libmidas-shared.so, so we can build it
by default but still link midas core executables to the normal midas library.
This will catch such a problem if it happens again.
K.O. |
656
|
09 Oct 2009 |
Konstantin Olchanski | Bug Report | change to building and linking libmidas.so, mserver linking fails when using shared library |
> --- Makefile
> < ld -shared -o $@ $^ $(LIBS) -lc
> ---
> > $(CXX) -shared -o $@ $^ $(LIBS) -lc
Will do. We also have a long standing request to change shared library name from lidmidas.so to libmidas-shared.so.
Different name for the .so file will permit us to build the shared library by default, but still link all MIDAS executables
with the static libmidas.a.
(there is no benefit from linking MIDAS executables - mlogger, mhttpd, etc - with the shared library,
and there is a significant cost in confusion from version skew between the executables and shared
libraries - I have had enough midnight calls "why did odbedit stop working? Oh, who changed LD_LIBRARY_PATH
and why is it now binding against this obsolete libmidas.so left over from 2 years ago?").
For user applications you can do whatever, but for MIDAS core applications I strongly suggest that they
be linked to the midas static library.
K.O. |
655
|
08 Oct 2009 |
Exaos Lee | Bug Report | Multiple definition of `SqlODBC::SqlODBC() |
I found there are two SqlODBC defined in different sources.
$ grep -n "class SqlODBC" src/*
src/history_odbc.cxx:282:class SqlODBC: public SqlBase
src/history_sql.cxx:293:class SqlODBC: public SqlBase
Both of them will be archived into one library libmidas.a if "HAVE_ODBC" defined. Then if you build a shared library, you will
get a link error as the following:
Linking CXX shared library lib/libmidas.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/midas-shared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -shared -Wl,-soname,libmidas.so -o lib/libmidas.so CMakeFiles/midas-shared.dir/src/ftplib.c.o CMakeFiles/midas-shared.dir/src/midas.c.o CMakeFiles/midas-shared.dir/src/system.c.o CMakeFiles/midas-shared.dir/src/mrpc.c.o CMakeFiles/midas-shared.dir/src/odb.c.o CMakeFiles/midas-shared.dir/src/ybos.c.o CMakeFiles/midas-shared.dir/src/history.c.o CMakeFiles/midas-shared.dir/src/alarm.c.o CMakeFiles/midas-shared.dir/src/elog.c.o CMakeFiles/midas-shared.dir/opt/DAQ/repos/bot/mxml/mxml.c.o CMakeFiles/midas-shared.dir/opt/DAQ/repos/bot/mxml/strlcpy.c.o CMakeFiles/midas-shared.dir/src/history_odbc.cxx.o CMakeFiles/midas-shared.dir/src/history_sql.cxx.o
CMakeFiles/midas-shared.dir/src/history_sql.cxx.o: In function `SqlODBC':
/opt/DAQ/repos/bot/midas/src/history_sql.cxx:200: multiple definition of `SqlODBC::SqlODBC()'
CMakeFiles/midas-shared.dir/src/history_odbc.cxx.o:/opt/DAQ/repos/bot/midas/src/history_odbc.cxx:315: first defined here
...
history_odbc.cxx:727: first defined here
collect2: ld returned 1 exit status
make[2]: *** [lib/libmidas.so] Error 1
Why is the class "SqlODBC" duplicated? |
654
|
08 Oct 2009 |
Tim Nicholls | Bug Report | mserver linking fails when using shared library |
I have experienced a problem building MIDAS from the head of the SVN repository (rev 4458) when
specifying the shared library flag. Whie the shared library appears to compile and link OK, the
subsequent compilation of mserver fails as follows:
$ make ROOTSYS= NEED_SHLIB=1
<... snipped some lines ...>
ld -shared -o linux/lib/libmidas.so linux/lib/midas.o linux/lib/system.o linux/lib/mrpc.o
linux/lib/odb.o linux/lib/ybos.o linux/lib/ftplib.o linux/lib/mxml.o linux/lib/history_midas.o
linux/lib/history_sql.o linux/lib/history.o linux/lib/alarm.o linux/lib/elog.o linux/lib/strlcpy.o -lutil -
lpthread -lz -lc
cc -c -g -O2 -Wall -Wuninitialized -Iinclude -Idrivers -I../mxml -Llinux/lib -DINCLUDE_FTPLIB -
D_LARGEFILE64_SOURCE -DHAVE_ZLIB -DOS_LINUX -fPIC -Wno-unused-function -o linux/lib/mana.o
src/mana.c
cc -c -g -O2 -Wall -Wuninitialized -Iinclude -Idrivers -I../mxml -Llinux/lib -DINCLUDE_FTPLIB -
D_LARGEFILE64_SOURCE -DHAVE_ZLIB -DOS_LINUX -fPIC -Wno-unused-function -o
linux/lib/cnaf_callback.o src/cnaf_callback.c
cc -c -g -O2 -Wall -Wuninitialized -Iinclude -Idrivers -I../mxml -Llinux/lib -DINCLUDE_FTPLIB -
D_LARGEFILE64_SOURCE -DHAVE_ZLIB -DOS_LINUX -fPIC -Wno-unused-function -o linux/lib/mfe.o
src/mfe.c
g++ -Dextname -DMANA_LITE -c -g -O2 -Wall -Wuninitialized -Iinclude -Idrivers -I../mxml -
Llinux/lib -DINCLUDE_FTPLIB -D_LARGEFILE64_SOURCE -DHAVE_ZLIB -DOS_LINUX -fPIC -Wno-
unused-function -o linux/lib/fal.o src/fal.c
cc -g -O2 -Wall -Wuninitialized -Iinclude -Idrivers -I../mxml -Llinux/lib -DINCLUDE_FTPLIB -
D_LARGEFILE64_SOURCE -DHAVE_ZLIB -DOS_LINUX -fPIC -Wno-unused-function -o
linux/bin/mserver src/mserver.c -lmidas -Wl,-rpath,/usr/local/lib -lutil -lpthread -lz
/usr/bin/ld: linux/bin/mserver: hidden symbol `__dso_handle' in /usr/lib/gcc/x86_64-redhat-
linux/4.1.2/crtbegin.o is referenced by DSO
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make: *** [linux/bin/mserver] Error 1
Having googled the error, it appears to be solved by modifying the linker statement for the shared
library in the Makefile at line 464 to use g++ rather than ld:
463c463
< ld -shared -o $@ $^ $(LIBS) -lc
---
> $(CXX) -shared -o $@ $^ $(LIBS) -lc
Presumably this is because g++ knows better how to link in the appropriate system libraries required
for some of the recently added C++ code?
This was on Scientific Linux SL5.2 x86_64, gcc version 4.1.2, glibc version 2.5-24.
Tim |
653
|
01 Oct 2009 |
Stefan Ritt | Bug Report | mfe.c: poll_event() before frontend_init() |
> The latest version of mfe.c has a problem where poll_event() is called before
> frontend_init() and this causes a crash because in poll_event() we try to access
> VME before it is initialized in frontend_init(). K.O.
Oops, that sneaked in when doing the last modification to display the frontend status.
I refactored register_equipment() so that frontend_init() gets called before
poll_event(). |
652
|
01 Oct 2009 |
Pierre-Andre Amaudruz | Bug Report | mfe.c: poll_event() before frontend_init() |
The latest version of mfe.c has a problem where poll_event() is called before
frontend_init() and this causes a crash because in poll_event() we try to access
VME before it is initialized in frontend_init(). K.O. |
651
|
30 Sep 2009 |
Konstantin Olchanski | Bug Report | mh2sql does not build, Error invoking 'odbedit': db_validate_size |
> Linking CXX executable bin/mh2sql
> CMakeFiles/mh2sql.dir/utils/mh2sql.cxx.o: In function `main':
> /opt/DAQ/repos/bot/midas/utils/mh2sql.cxx:150: undefined reference to `MakeMidasHistoryODBC()'
Yes, I am in the process of changing the midas history interface and accidentally committed a version of
mh2sql (utility for converting MIDAS history .hst files to SQL database) that uses the new interface.
This is now fixed in svn rev 4571.
The new C++ interface to the MIDAS history is in include/history.h and implementations for data storage
using both midas .hst files and SQL (ODBC/MySQL) database are also committed (history_midas.cxx
and history_sql.cxx). The file history_odbc.cxx will be removed after some more testing of the new
interface.
(All the new code is not activated yet, pending more testing).
K.O. |
650
|
30 Sep 2009 |
Konstantin Olchanski | Bug Report | Error invoking 'odbedit': db_validate_size |
> $ odbedit -e expcvadc
> odbedit: /opt/DAQ/repos/bot/midas/src/odb.c:651: db_validate_sizes: Assertion
`sizeof(EQUIPMENT_INFO) == 400' failed.
Yes, this is now fixed, svn rev 4571 should be okey. Sorry about causing this problem - Stefan added
some useful additional data to EQUIPMENT_INFO and my check for binary compatibility caught it and
complained. Unfortunately on Saturday Stefan had to abruptly go back to PSI and things have been a little
bit chaotic because we did not complete the testing of all the new changes and additions.
K.O. |
649
|
29 Sep 2009 |
Exaos Lee | Bug Report | Error invoking 'odbedit': db_validate_size |
It seems to be fixed in svn-r4568:
-----------------------------------------------------------------------
r4568 | olchanski | 2009-09-27 23:56:39 +0800 (日, 27 9月 2009) | 5 lines
mhttpd: compile using the C++ compiler.
mhttpd: fix wrong initialization of /History/ODBC_DSN
odb.c: size of EQUIPMENT_INFO has changed.
Makefile: use "-O2" compiler flag instead of "-O3" - to fix SL5 gcc crash (ICE)
But another compiling error:
Linking CXX executable bin/mh2sql
CMakeFiles/mh2sql.dir/utils/mh2sql.cxx.o: In function `main':
/opt/DAQ/repos/bot/midas/utils/mh2sql.cxx:150: undefined reference to `MakeMidasHistoryODBC()'
|
648
|
29 Sep 2009 |
Exaos Lee | Bug Report | Error invoking 'odbedit': db_validate_size |
Revision: r4567
Error output:
$ odbedit -e expcvadc
odbedit: /opt/DAQ/repos/bot/midas/src/odb.c:651: db_validate_sizes: Assertion `sizeof(EQUIPMENT_INFO) == 400' failed.
zsh: abort odbedit -e expcvadc
|
647
|
27 Sep 2009 |
Exaos Lee | Forum | deprecated conversion from string constant to ‘char*’ |
> There is no "type conversions". The compiler is whining about code like this:
>
> /* data type names */
> static char *tid_name[] = {
> "NULL",
> "BYTE",
> ...
>
> I guess we should keep the compiler happy and make them "static const char*".
>
> BTW, my compiler is SL5.2 gcc-4.1.2 and it does not complain. What's your compiler?
>
> K.O.
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Debian 4.3.4-2' --with-
bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs --enable-
languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared --enable-multiarch -
-enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-
gettext --enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug --enable-objc-gc --
enable-mpfr --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --
host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.3.4 (Debian 4.3.4-2) |
646
|
27 Sep 2009 |
Konstantin Olchanski | Forum | deprecated conversion from string constant to ‘char*’ |
> I encountered many warning while building MIDAS (svn r4556). Please see the
> attached log file. Most of them are caused by type conversion from string to
> "char*".
> Though I can ignore all the warning without any problem, I still hate to see
> them. :-)
There is no "type conversions". The compiler is whining about code like this:
/* data type names */
static char *tid_name[] = {
"NULL",
"BYTE",
...
I guess we should keep the compiler happy and make them "static const char*".
BTW, my compiler is SL5.2 gcc-4.1.2 and it does not complain. What's your compiler?
K.O. |