I am implementing buttons to launch scripts from a custom page. 

The simple way works, i.e.

  <input type=submit name=customscript value="run_script">

But I want to stay on the page. Copying "Customscript button without a page 
reload" from https://midas.triumf.ca/MidasWiki/index.php/Custom_Page_Features 
yields the following error:

Uncaught ReferenceError: XMLHttpRequestGeneric is not defined
    at cs_button (Trend:165)
    at HTMLInputElement.onclick (Trend:90)  

I included  <script src="mhttpd.js"></script> and call mhttpd_init on page load.

So why can`t it run this ajax request?


Or is there a better way to launch a script without messing up the page

> Uncaught ReferenceError: XMLHttpRequestGeneric is not defined
>     at cs_button (Trend:165)
>     at HTMLInputElement.onclick (Trend:90)  

That code was not written by me, so I'm must guessing here.

Probably the XMLHttpRequestGeneric() is some function hiding browser specialities to create 
AJAX requests. These days most browser understand the standard request

XMLHttpRequest()

so why don't you try to just remove the "Generic"

Stefan

> > Uncaught ReferenceError: XMLHttpRequestGeneric is not defined
> >     at cs_button (Trend:165)
> >     at HTMLInputElement.onclick (Trend:90)  
> 
> That code was not written by me, so I'm must guessing here.
> 
> Probably the XMLHttpRequestGeneric() is some function hiding browser specialities to create 
> AJAX requests. These days most browser understand the standard request
> 
> XMLHttpRequest()
> 
> so why don't you try to just remove the "Generic"
> 
> Stefan

That removes the error, but script doesnt get called. It goes to the javascript function and 
callback, but nothing happens. 

When I change type=button to type=submit , the script gets called again, but with page refresh. 

Hi,

On a custom web page, can a "filled" area be made to flash (i.e. cycle between 
two colours)? This area would have to update faster than the whole page update.
 
I have a custom page representing a gas system, and the users
want the heaters to flash when they are on, as is done in their EPICS page.

Thanks,
Suzannah 

Hello,

I am having a problem with the root-based analyzer. It crashes when I try to 
analyze multiple runs OFFLINE using the "-i run%05d.mid -o result%05d.root -r 
1 2" feature.

I can reproduce the problem with the example experiment which comes with the 
MIDAS distribution:
Running the analyzer ONLINE works fine: One can start and stop runs one after 
the other, roody shows the histograms being reset and then filled again and 
such.

But OFFLINE, the analyzer crashes when trying to analyze the SECOND run in a 
sequence. So
./analyzer -i run%05d.mid -o result%05d.root -r 1 1   works (only run 1)
./analyzer -i run%05d.mid -o result%05d.root -r 1 3   dies on run 2
Output attached (I added printf's to the "init"-modules, but that's irrelevant 
here)


My own analyzer shows the same effect. There I got the impression the segfault 
happens on the first attempt to Fill/Reset/SetName etc. a histogram in the 2nd 
run. But with the midas example it looks like the analyzer finishes filling 
histos even for run 2, but then dies in eor.

Can you reproduce the problem?

I run MIDAS on an Intel Quadcore, 64 bit SuSE Linux 10.2.
pohl@lamb2:~/midas/examples/root> gcc --version
gcc (GCC) 4.1.2 20061115 (prerelease) (SUSE Linux)

(maybe 4.1.2 "PRERELEASE" is the problem? See message ID 344)

I am using midas rev. 3674 (April 19, 2007), but I got the impression there 
has since not been a change relevant to this problem. Please correct me if I 
am wrong, then I would try it with Rev HEAD.
(My version includes already the fix to the x86_64 segfault problem of message 
ID 337)


Best regards,

Randolf

Unfortunately I don't have time right now to debug the problem, but I could see
roughly what it could be. The analyzer crashes inside CloseRootOutputFile:

#5  <signal handler called>
#6  0x00002b5f52ad5ee5 in free () from /lib64/libc.so.6
#7  0x000000000040c89b in CloseRootOutputFile () at src/mana.c:1489

in the line 

    free(tree_struct.event_tree[i].branch);

If a "free" crashes, it might indicate that the memory beyond the allocated space
got corrupted. The branch gets allocated in book_ttree(), once for each
analyze_request[i]. The branch gets filled in write_event_ttree():

      /* fill tree both online and offline */
      if (!exclude_all)
         et->tree->Fill();

Maybe one should put printf debugging statements in these places to see what's
going on.

Hello Stefan,

tree_struct.n_tree keeps counting up from run to run (in book_ttree). This should 
presumably not be the case, since CloseRootOutputFile() frees the trees at eor().

------------------- output ---------------------------
lamb@lamb2:~/midas/root_3705> ./analyzer -e 
exa_root -i /tmp/midas/examples/root/run%05d.mid -o /tmp/midas/run%05d.root -r 1 2
Root server listening on port 9090...
Running analyzer offline. Stop with "!"
book_ttree: tree_struct.n_tree = 1
book_ttree: tree_struct.n_tree = 2
Set run number 1 in ODB
Load ODB from run 1...OK
/tmp/midas/examples/root/run00001.mid:2722  /tmp/midas/run00001.root:2720  events, 
0.21s
book_ttree: tree_struct.n_tree = 3     <<---- !!!!
book_ttree: tree_struct.n_tree = 4
Set run number 2 in ODB
Load ODB from run 2...OK
/tmp/midas/examples/root/run00002.mid:2347  /tmp/midas/run00002.root:2345  events, 
0.18s

 *** Break *** segmentation violation
----------------- \output ----------------------------

Adding this one line fixes the segfault problem for the root example expt.

----------------- code -------------------------
lamb@lamb2:/data/software/midas/midas_3705/src/src> svn diff mana.c
Index: mana.c
===================================================================
--- mana.c      (revision 3705)
+++ mana.c      (working copy)
@@ -1496,6 +1496,7 @@
    /* delete event tree */
    free(tree_struct.event_tree);
    tree_struct.event_tree = NULL;
+   tree_struct.n_tree = 0;
 
    // go to ROOT root directory
    gROOT->cd();
---------------- \code ---------------------------

Please check if this gives the intended behaviour. I am not very familiar with the 
midas internals.

Unfortunately my own analyzer's segfault problem is not solved by this patch. I 
guess I have to keep searching for a bug on my side.....  :-)


Cheers,

Randolf

> tree_struct.n_tree keeps counting up from run to run (in book_ttree). This should 
> presumably not be the case, since CloseRootOutputFile() frees the trees at eor().

Yes this indeed a bug. I applied your change and committed the new code.

Hello again,

just for the record, in case somebody else runs into the same problem...

I have hunted down "my" segfault problem to the fact that I book histograms not 
in <module>_init, but in <module>_bor. I have to do so, because only in bor do I 
know which histograms to book, as this information comes from the ODB (booking 
only histograms for CAMAC modules which were set to "read" in the ODB). The core 
dump happens on the first access (->Fill, ->SetName,...) of one of these histos 
in the 2nd run analyzed offline ("./analyzer -r n m").

In mana.c:bor (line 1854) is stated that "all ROOT objects created by user module 
bor() functions go to the output file", and then does a gManaOutputFile->cd();
Consequently, the histograms vanish after the file is closed, therefore the 
segfault when trying to access them in the 2nd run. (I keep track of existing 
histograms, only booking the missing histos in bor.)

The problem goes away with "gROOT->cd()" in <module>_bor, before fiddling with 
TFolders and booking the histogram.


I do, however, not really understand the intention why histos booked in bor() go 
to only the file, whereas histos booked in init() go to memory. Could you please 
comment briefly? Maybe I missed the most important point. And what about online 
mode, should this work?


Thanks a lot in advance,

Randolf

> I have hunted down "my" segfault problem to the fact that I book histograms not 
> in <module>_init, but in <module>_bor. I have to do so, because only in bor do I 
> know which histograms to book, as this information comes from the ODB (booking 
> only histograms for CAMAC modules which were set to "read" in the ODB). The core 
> dump happens on the first access (->Fill, ->SetName,...) of one of these histos 
> in the 2nd run analyzed offline ("./analyzer -r n m").
> 
> In mana.c:bor (line 1854) is stated that "all ROOT objects created by user module 
> bor() functions go to the output file", and then does a gManaOutputFile->cd();
> Consequently, the histograms vanish after the file is closed, therefore the 
> segfault when trying to access them in the 2nd run. (I keep track of existing 
> histograms, only booking the missing histos in bor.)
> 
> The problem goes away with "gROOT->cd()" in <module>_bor, before fiddling with 
> TFolders and booking the histogram.

ROOT has the strange concept of "current working directory", coming from the fact that
ROOT was written by Fortran and PAW people, being used to have directories and
subdirectories with a persistent state (not really object-oriented style). So one can
set the "current working directory" to the root (=memory) with gROOT->cd() and to a
subdirectory which will later be written into a file with gManaOutputFile->cd(). If
you do the first one, the histograms are created only in memory, while in the later
case they are also created in memory, but will later be written into the output file
in the routine CloseRootOutputFile(). So if you do a gROOT->cd() in <module>_bor,
these histograms will not be written to file. So I guess your solution is not a real
solution.

> I do, however, not really understand the intention why histos booked in bor() go 
> to only the file, whereas histos booked in init() go to memory. Could you please 
> comment briefly? Maybe I missed the most important point. And what about online 
> mode, should this work?

The root output file is opened in bor() and closed in eor(). For a histo to go to the
file, it must be booked after opening the file, that is after bor() in mana.c and
therefore after the gManaOutputFile->cd().

I agree with you that the current scheme is not satisfactory. When running online, you
want to keep the histos between the runs. When running offline, you delete and
re-create them for each run. It would be better to create all histos online and
offline under gROOT, and just copy them to gManaOutputFile before writing them. I have
to admit that this root code was never really used in a productive environment for
offline analysis, so there might be some issues here and there. Some people write
directly root files in the logger, and then do a root-only (without the midas
analyzer) analysis. Unfortunately I'm busy these days and cannot write any code right
now. But if you feel like something should be modified in mana.c, please send it to me
and I can incorporate it into the standard code.

Hi

> So I guess your solution is not a real solution.

I was not precise enough on what I do. This way the histograms persist in memory, but 
they are also written to every file:

e.g. in module "trig_tdc":

  TDirectory *savedir = gDirectory;  // will restore this afterwards
  gROOT->cd();     // go to file

  // make sure we are in the right "analyzer module folder"
  TDC_Folder = (TFolder *) gROOT->FindObjectAny("trig_tdc");
  gHistoFolderStack->Add((TObject *) TDC_Folder);

  ...(loop over all TDCs, figure out which histos exist, and which need to be booked)

  open_subfolder("raw4208");
  hrTDC = h1_book(....);   // create histo in memory, but it shows up in the file, too.
  close_subfolder(); //raw4208

  // restore gHistoFolderStack (we added a folder when entering routine)
  gHistoFolderStack->Remove(gHistoFolderStack->Last());

  // restore current directory
  savedir->cd();

When deleting histos I do:

     gManaHistosFolder->RecursiveRemove(*pHisto);
    (*pHisto)->Delete();
    (*pHisto) = NULL;  // for my book-keeping of existing histos.

You don't have to clear the histos explicitly between runs. gManaHistosFolder does this 
magic to you.

> But if you feel like something should be modified in mana.c, please send it to me
> and I can incorporate it into the standard code.

No, the code is fine. I just wanted to explain my problem and a solution to it, because 
I thought that somebody might run into the same problem, too. 

Ciao,

Randolf

Dear experts,

I use fedora 12 and midas 4680. there is problem to start run when the frontend
application runs fine. 


# odbedit -c start


Starting run #18
[midas.c:8423:rpc_client_connect,ERROR] timeout on receive remote computer info: 
[midas.c:3659:cm_transition,ERROR] cannot connect to client
"feTPCPacketReceiver" on host tpcdaq0, port 36663, status 503
[midas.c:8423:rpc_client_connect,ERROR] timeout on receive remote computer info: 
[midas.c:4880:cm_shutdown,ERROR] Cannot connect to client 'frontend' on host
'hostname', port 36663
[midas.c:4883:cm_shutdown,ERROR] Killing and Deleting client
'feTPCPacketReceiver' pid 24516
[midas.c:3857:cm_transition,ERROR] Could not start a run: cm_transition() status
503, message 'Cannot connect to client 'frontend''
Run #18 start aborted
Error: Cannot connect to client 'frontend'

11:03:42 [Logger,INFO] Deleting previous file "/home/daq/Run/online/run00018.mid"

11:03:42 [Logger,INFO] Client 'feTPCPacketReceiver' on buffer 'SYSMSG' removed
by cm_watchdog because client pid 24516 does not exist

11:03:42 [Logger,ERROR] [system.c:563:ss_shm_close,ERROR]
shmctl(shmid=7274511,IPC_RMID) failed, errno 1 (Operation not permitted)

11:03:42 [ODBEdit,INFO] Run #18 start aborted
==========================================================================

there are several ethernet cards on the host machine. eth0 connect the host
machine to the gateway machine and the front end application listen to eth1 for
the incoming data packets:

eth0      Link encap:Ethernet  HWaddr xx:xx:xx:xx:xx:xx  
          inet addr:10.0.1.1  Bcast:10.0.1.63  Mask:255.255.255.0
          inet6 addr: fe80::f6ce:46ff:fe99:709b/64 Scope:Link
          UP BROADCAST RUNNING MULTICAST  MTU:1500  Metric:1
          RX packets:470870 errors:0 dropped:0 overruns:0 frame:0
          TX packets:515987 errors:0 dropped:0 overruns:0 carrier:0
          collisions:0 txqueuelen:1000 
          RX bytes:345000246 (329.0 MiB)  TX bytes:377269124 (359.7 MiB)
          Interrupt:17 

eth1      Link encap:Ethernet  HWaddr xx:xx:xx:xx:xx:xx   
          inet addr:10.0.1.2  Bcast:10.255.255.255  Mask:255.0.0.0
          inet6 addr: fe80::226:55ff:fed6:56a9/64 Scope:Link
          UP BROADCAST RUNNING MULTICAST  MTU:1500  Metric:1
          RX packets:0 errors:0 dropped:0 overruns:0 frame:0
          TX packets:15 errors:0 dropped:0 overruns:0 carrier:0
          collisions:0 txqueuelen:1000 
          RX bytes:0 (0.0 b)  TX bytes:1836 (1.7 KiB)
          Memory:ec180000-ec1a0000 


thanks for hints

> I use fedora 12 and midas 4680. there is problem to start run when the frontend
> application runs fine. 

I don't know exactly what is wrong, but I would check following things:

- does your feTCPPacketReceiver die during the start-of-run? Maybe you do some segfault 
int he begin-of-run routine. Can you STOP a run?

- is there any network problem due to your two cards? When you try to stop your fe from 
odbedit with

# odbedit -c "shutdown feTCPPacketReceiver"

do you then get the same error? The shutdown functionality uses the same RPC channel as 
the start/stop run. Some people had firewall problems, on both sides (host AND client), 
so make sure all firewalls are disabled.

- if you disable one network card, do you still get the same problem?

> - does your feTCPPacketReceiver die during the start-of-run? Maybe you do some segfault 
> int he begin-of-run routine. Can you STOP a run?
when start a run, it bring the mtransition process and I guess the server try to talk to the
client, then it fails and the frontend application get killed since not response.

>> When you try to stop your fe from 
> odbedit with  # odbedit -c "shutdown feTCPPacketReceiver"

it gets
[midas.c:8423:rpc_client_connect,ERROR] timeout on receive remote computer info: 
[midas.c:4880:cm_shutdown,ERROR] Cannot connect to client
"feTPCPacketReceiver" on host 'tpcdaq0', port 35865
[midas.c:4883:cm_shutdown,ERROR] Killing and Deleting client
'feTPCPacketReceiver' pid 27250
Client feTPCPacketReceiver not active


what does this error mean? :
11:03:42 [Logger,ERROR] [system.c:563:ss_shm_close,ERROR]
shmctl(shmid=7274511,IPC_RMID) failed, errno 1 (Operation not permitted)


thanks
hai

p.s. that code runs fine on my laptop with ubuntu 9, so that also be possible that somewhere
my configuration not right to cause problem

Dear MIDAS experts,

I have a time series of slow control measurements in an ASCII format - 
data records in a format (run_number, time, temperature, voltage1, ..., voltageN), 
and, if possible, would like to convert them into a MIDAS history format. 

Making MIDAS events out of that data is easy, but is it possible to preserve 
the time stamps?  - Logically, this boils down to whether it is possible to have  
the event time set by a user frontend

-- as always - many thanks, regards, Pasha

I think I found an answer to my question: a user-controlled event header does have a time stamp: 

https://daq00.triumf.ca/MidasWiki/index.php/Event_Structure#Event_Header

-- apologies for the spam, regards, Pasha

I've recently run into issues when using JSON.parse on ODB keys containing 
8-bit data.

For JSON.parse to successfully parse a string, (A) the string must be valid 
UTF-8, (B) several whitespace characters, control characters, and the 
characters " and \ must be escaped, and (C) you've got to follow the key-
value rules laid out in http://www.json.org/.

The web browser takes care of (A), and I verified that for this key Midas 
handled (C) correctly.  In principle, the function json_write in odb.c 
handles (B) - but json_write does not escape control characters.

To manage this problem, I modified json_write (in odb.c) to replace any 
control character with the more-inocuous character, 'C'.  My default case 
now looks like:

default:
         {
           // if a char is a control character,
           // print 'C' in its place
           // note that this loses data:
           // a more-correct method would be to print
           // \uXXXX, where XXXX is the character in hex
           if(iscntrl(*s)){
             (*buffer)[(*buffer_end)++] = 'C';
             s++;
           } else {
             (*buffer)[(*buffer_end)++] = *s++;
           }
         }
      
Where the call to iscntrl(*s) requires the addition of the ctype.h header 
file.

I'm guessing a blanket replacement of control characters with 'C' isn't 
something all Midas users would want to do.  Replacing the control character 
with its hex value seems like a good choice - but not without adding bounds 
checking!

An alternative to changing odb.c could be to add a regex to Midas response 
text which removes all control characters (U+0000 - U+001F): 

var resp_lint = req.response.replace(/[\u{0000}-\u{001F}]/gmu, '');
var json_obj = JSON.parse(resp_lint);

Unfortunately, the 'u' regex flax doesn't work on the Firefox version 
included in Scientific Linux 6.8.  

> I've recently run into issues when using JSON.parse on ODB keys containing 
> 8-bit data.

I am tempted to take a hard line and say that in general MIDAS TID_STRING data should be valid 
UTF-8 encoded Unicode. In the modern mixed javascript/json/whatever environment I think
it is impractical to handle or permit invalid UTF-8 strings.

Certainly in the general case, replacing all control characters with something else or escaping them or 
otherwise changing the value if TID_STRING data would wreck *valid* UTF-8 strings, which I would 
assume to be the normal use.

In other words, non-UTF-8 strings are following non-IEEE-754 floating point values into oblivion - as 
we do not check the TID_FLOAT and TID_DOUBLE is valid IEEE-754 values, we should not check 
that TID_STRING is valid UTF-8.

But in your specific case, why do you have random control characters in your TID_STRING data? 
Maybe you are using TID_STRING as general storage instead of arrays of TID_CHAR or 
TID_DWORD?

K.O.



> 
> For JSON.parse to successfully parse a string, (A) the string must be valid 
> UTF-8, (B) several whitespace characters, control characters, and the 
> characters " and \ must be escaped, and (C) you've got to follow the key-
> value rules laid out in http://www.json.org/.
> 
> The web browser takes care of (A), and I verified that for this key Midas 
> handled (C) correctly.  In principle, the function json_write in odb.c 
> handles (B) - but json_write does not escape control characters.
> 
> To manage this problem, I modified json_write (in odb.c) to replace any 
> control character with the more-inocuous character, 'C'.  My default case 
> now looks like:
> 
> default:
>          {
>            // if a char is a control character,
>            // print 'C' in its place
>            // note that this loses data:
>            // a more-correct method would be to print
>            // \uXXXX, where XXXX is the character in hex
>            if(iscntrl(*s)){
>              (*buffer)[(*buffer_end)++] = 'C';
>              s++;
>            } else {
>              (*buffer)[(*buffer_end)++] = *s++;
>            }
>          }
>       
> Where the call to iscntrl(*s) requires the addition of the ctype.h header 
> file.
> 
> I'm guessing a blanket replacement of control characters with 'C' isn't 
> something all Midas users would want to do.  Replacing the control character 
> with its hex value seems like a good choice - but not without adding bounds 
> checking!
> 
> An alternative to changing odb.c could be to add a regex to Midas response 
> text which removes all control characters (U+0000 - U+001F): 
> 
> var resp_lint = req.response.replace(/[\u{0000}-\u{001F}]/gmu, '');
> var json_obj = JSON.parse(resp_lint);
> 
> Unfortunately, the 'u' regex flax doesn't work on the Firefox version 
> included in Scientific Linux 6.8.  

> > I've recently run into issues when using JSON.parse on ODB keys containing 
> > 8-bit data.
> 
> I am tempted to take a hard line and say that in general MIDAS TID_STRING data should be valid 
> UTF-8 encoded Unicode. In the modern mixed javascript/json/whatever environment I think
> it is impractical to handle or permit invalid UTF-8 strings.
> ....
> But in your specific case, why do you have random control characters in your TID_STRING data? 
> Maybe you are using TID_STRING as general storage instead of arrays of TID_CHAR or 
> TID_DWORD?

I'm a little confused by this report and want to make sure I understand the situation.  Konstantin points
out that the TID_STRING should be valid UTF-8.  But I think that Amy agreed that the string was valid UTF-8.
 My understanding was that Amy's contention was that the valid UTF-8 string didn't get returned as valid JSON.

But I am having trouble reproducing your behaviour Amy.  I created a ODB string variable with a tab control
control character

  sprintf(mystring,"first line \t second line");
  status = db_set_value(hDB, 0,"/test2/mystring", &mystring, size, 1, TID_STRING);

and what I tried to pull the ODB using jcopy

http://neut18:8081/?cmd=jcopy&odb=/test2/mystring&format=json

I got 

{
"mystring/key" : { "type" : 12, "item_size" : 32, "access_mode" : 7, "last_written" : 1477416322 },
"mystring" : "first line \t second line"
}

which seems to be valid JSON.  

I only tried this with tab.  Are there other control characters that you are having trouble with?  Or maybe
I misunderstand the question?





> 
> > 
> > For JSON.parse to successfully parse a string, (A) the string must be valid 
> > UTF-8, (B) several whitespace characters, control characters, and the 
> > characters " and \ must be escaped, and (C) you've got to follow the key-
> > value rules laid out in http://www.json.org/.
> > 
> > The web browser takes care of (A), and I verified that for this key Midas 
> > handled (C) correctly.  In principle, the function json_write in odb.c 
> > handles (B) - but json_write does not escape control characters.
> > 
> > To manage this problem, I modified json_write (in odb.c) to replace any 
> > control character with the more-inocuous character, 'C'.  My default case 
> > now looks like:
> > 
> > default:
> >          {
> >            // if a char is a control character,
> >            // print 'C' in its place
> >            // note that this loses data:
> >            // a more-correct method would be to print
> >            // \uXXXX, where XXXX is the character in hex
> >            if(iscntrl(*s)){
> >              (*buffer)[(*buffer_end)++] = 'C';
> >              s++;
> >            } else {
> >              (*buffer)[(*buffer_end)++] = *s++;
> >            }
> >          }
> >       
> > Where the call to iscntrl(*s) requires the addition of the ctype.h header 
> > file.
> > 
> > I'm guessing a blanket replacement of control characters with 'C' isn't 
> > something all Midas users would want to do.  Replacing the control character 
> > with its hex value seems like a good choice - but not without adding bounds 
> > checking!
> > 
> > An alternative to changing odb.c could be to add a regex to Midas response 
> > text which removes all control characters (U+0000 - U+001F): 
> > 
> > var resp_lint = req.response.replace(/[\u{0000}-\u{001F}]/gmu, '');
> > var json_obj = JSON.parse(resp_lint);
> > 
> > Unfortunately, the 'u' regex flax doesn't work on the Firefox version 
> > included in Scientific Linux 6.8.