Back Midas Rome Roody Rootana
  Midas DAQ System, Page 53 of 145  Not logged in ELOG logo
New entries since:Wed Dec 31 16:00:00 1969
ID Date Author Topic Subject
  1870   30 Mar 2020 Stefan RittInfombedtls, mhttpd mongoose 6.16 update
I had some quick look at the new mongoose code and didn't find anything I dislike. Did a quick test of the proxy which worked and is nice to have. 
Agree with all KO said about authentication.

So if there are no complaints, I would suggest that we move the summary of this thread into the official documentation.

Stefan
  1869   27 Mar 2020 Stefan RittForummlogger: misleading error messages for ROOT
Ok, changed.

Stefan
  1868   27 Mar 2020 Andreas SuterForummlogger: misleading error messages for ROOT
Hi Stefan,

I think this only partially resolves the issue, in log_write:

#ifdef HAVE_ROOT
   } else if (log_chn->format == FORMAT_ROOT) {
      status = root_write(log_chn, pevent, pevent->data_size + sizeof(EVENT_HEADER));
#endif
   }

   actual_time = ss_millitime();
   if ((int) actual_time - (int) start_time > 3000)
      cm_msg(MINFO, "log_write", "Write operation on \'%s\' took %d ms", log_chn->path.c_str(), actual_time - start_time);

   if (status != SS_SUCCESS && !stop_requested) {
      cm_msg(MTALK, "log_write", "Error writing output file, stopping run");
      cm_msg(MERROR, "log_write", "Cannot write \'%s\', error %d, stopping run", log_chn->path.c_str(), status);
      stop_the_run(0);

      return status;
   }

In your solution root_write returns quietly but status == SS_INVALID_FORMAT (not SS_SUCCESS) and hence I get another misleading error message "Error writing output file, stopping run".

In order to prevent this you also would need to change the return value to SS_SUCCESS.
  1867   27 Mar 2020 Stefan RittForummlogger: misleading error messages for ROOT
Dear simplest solution seems to me to just remove the error message generation and silently ignore the BOE EOR events. 

Committed that change.

Stefan
  1866   25 Mar 2020 Konstantin OlchanskiForummlogger: misleading error messages for ROOT
> [Logger,ERROR] [mlogger.cxx:3358:root_write,ERROR] Cannot write system event into ROOT file, event_id 0xffff8000

Hi, Andreas, please open a bug report for this problem on bitbucket, there is now at least 2 bugs against
the ROOT writer (some events are written in duplicate sometimes), and I hope to fix this next time i review
the mlogger (RSN!). Biggest problem is that I do not use the ROOT output myself, so I have no way
to know if ROOT files produced by mlogger are correct or make sense. (without setting up some kind
of test environment with a ROOT file reader.

Thank you for reporting this problem here, so more people know about it.

If somebody has a patch to fix this, please send it in!

K.O.
  1865   25 Mar 2020 Andreas SuterForummlogger: misleading error messages for ROOT
Dear All,

At our experiment we write ROOT files. When starting/stopping runs we get the following error messages:

[Logger,ERROR] [mlogger.cxx:3358:root_write,ERROR] Cannot write system event into ROOT file, event_id 0xffff8000

[Logger,ERROR] [mlogger.cxx:3358:root_write,ERROR] Cannot write system event into ROOT file, event_id 0xffff8001

Looking into the source code I found that log_write (line 4248) sends these Midas System Events (BOR,EOR) to root_write without filtering them. root_write() checks in a first step if it gets such Midas System Events and if yes, moans.

Wouldn't it be better just to filter these events in log_write, before calling root_write, avoiding unnecessary error messages?

Is there something I miss?

Thanks,
  Andreas
  1864   24 Mar 2020 Konstantin OlchanskiForumSave data to FTP
> 
> Since ILL only provides access via SFTP and everything else is not existent or blocked (not even ssh is possible),
> this is the only thing we can work with by now. 
> 

Oops. SFTP != FTP.

SFTP uses SSH for data transport, so we cannot do it directly from C++ code in MIDAS. (we could use libssh, etc, but...)

I suggest you use lazylogger with the lazy_dache script, replace "dccp" with "sftp", replace "nsls" with an sftp "ls" command.

If you get it working, please consider contributing your lazylogger script to midas. (and does not have to be written in perl, python should work equally well).

For setting up lazylogger with the script method, I am pretty sure I posted the instructions to the forum (ages ago),
let me know if you cannot find them.

Good luck.

K.O.
  1863   24 Mar 2020 Ivo SchulthessForumSave data to FTP
> Logging directly from the midas logger to FTP is a bit cumbersome. In case of delays during login etc. this can throttle the whole DAQ chain. 
> What we use in our lab is to write to local disk, then use the lazylogger (https://midas.triumf.ca/MidasWiki/index.php/Lazylogger) to copy the 
> local files to a remote FTP server. This way we de-couple data taking from backup, making the system much more swift.
> 
> Best,
> Stefan

Yes, see this now too. I will, therefore, try to set up the lazylogger properly. 
  1862   24 Mar 2020 Stefan RittForumSave data to FTP
Logging directly from the midas logger to FTP is a bit cumbersome. In case of delays during login etc. this can throttle the whole DAQ chain. 
What we use in our lab is to write to local disk, then use the lazylogger (https://midas.triumf.ca/MidasWiki/index.php/Lazylogger) to copy the 
local files to a remote FTP server. This way we de-couple data taking from backup, making the system much more swift.

Best,
Stefan
  1861   24 Mar 2020 Ivo SchulthessForumSave data to FTP
> > I try to save data to an FTP server but don't get any data on the server. Midas does not complain or message any error but also nothing gets saved. Does somebody have experience with this? I use the following settings for the ODB mlogger channel settings: Type: FTP, Filename: server.com, 21, user, pw, ., run%06d.mid, Format: MIDAS, Output: FILE. What would be the Output: FTP setting for? I tried this but it does not work at all. 
> 
> Hi, Ivo, good to hear from a midas user in these difficult times.
> 
> We do not use FTP at TRIUMF, but Stefan asked us to keep FTP alive and working, so we should be able
> to get you going. I will try to find the FTP instructions for you, I am pretty sure I have them somewhere.
> 
> In the mean time, I am very curious why you are using a FTP to record data, is it some kind
> of data appliance where simplest input for data is FTP? Using NFS does not work or is too hard?
> 
> Also for example at CERN, we write data to Castor and EOS, for this mlogger writes data to local disk,
> then the lazylogger runs a script to move the data to Castor and EOS. The example lazylogger
> scripts for this are in the MIDAS "progs" directory. But maybe you do not have a local disk and this would
> not work for you.
> 
> In other news, I hope to work on mlogger and lazylogger support for cloud storage (swift and s3 apis?),
> would that be useful as replacement for FTP?
> 
> K.O.
>
Good Morning Konstantin

Thanks for the fast reply.  Yes, it is, Midas is one of the things we can at least improve from home. 

Our experiment is planned to measure (soon) at ILL. Now since we don't use the equipment/detector from the 
beamline but our own, all the data from Midas is saved on the local drive. This is fine in the first instance
but then we also need proper backup. Since our experiment is quite small, the easiest solution I came up with
is to copy all of our data to the ILL storage which has enough space and is properly backed up. The ILL data 
storage allows only SFTP connections, nothing else. Since Midas has the FTP feature, having a separate FTP 
logger channel seemed the easiest way to go. 

Thanks for your input, I will look into how to mount SFTP and then this would also be a solution. 

Since ILL only provides access via SFTP and everything else is not existent or blocked (not even ssh is possible),
this is the only thing we can work with by now. 

Best regards,
Ivo
  1860   23 Mar 2020 Konstantin OlchanskiForumSave data to FTP
> I try to save data to an FTP server but don't get any data on the server. Midas does not complain or message any error but also nothing gets saved. Does somebody have experience with this? I use the following settings for the ODB mlogger channel settings: Type: FTP, Filename: server.com, 21, user, pw, ., run%06d.mid, Format: MIDAS, Output: FILE. What would be the Output: FTP setting for? I tried this but it does not work at all. 

Hi, Ivo, good to hear from a midas user in these difficult times.

We do not use FTP at TRIUMF, but Stefan asked us to keep FTP alive and working, so we should be able
to get you going. I will try to find the FTP instructions for you, I am pretty sure I have them somewhere.

In the mean time, I am very curious why you are using a FTP to record data, is it some kind
of data appliance where simplest input for data is FTP? Using NFS does not work or is too hard?

Also for example at CERN, we write data to Castor and EOS, for this mlogger writes data to local disk,
then the lazylogger runs a script to move the data to Castor and EOS. The example lazylogger
scripts for this are in the MIDAS "progs" directory. But maybe you do not have a local disk and this would
not work for you.

In other news, I hope to work on mlogger and lazylogger support for cloud storage (swift and s3 apis?),
would that be useful as replacement for FTP?

K.O.
  1859   23 Mar 2020 Ivo SchulthessForumSave data to FTP
Dear all
I try to save data to an FTP server but don't get any data on the server. Midas does not complain or message any error but also nothing gets saved. Does somebody have experience with this? I use the following settings for the ODB mlogger channel settings: Type: FTP, Filename: server.com, 21, user, pw, ., run%06d.mid, Format: MIDAS, Output: FILE. What would be the Output: FTP setting for? I tried this but it does not work at all. 
Thanks in advance,
Ivo
  1858   17 Mar 2020 Konstantin OlchanskiInfombedtls, mhttpd mongoose 6.16 update
> > > the update of mhttpd to mongoose version 6.16 was committed to the develop branch of midas.

current code looks for the mbedtls library in ../mbedtls (next to midas)

if cmake misdetects it, turn it off by setting NO_MBEDTLS (same as NO_ROOT & co)

if you do want to build mhttpd with mbedtls, do this:

cd .../midas
cd ../
git clone https://github.com/ARMmbed/mbedtls.git
cd mbedtls
git submodule update --init ### this will populate the "crypto" directory
make ### if "python2" is missing, building of test suite programs will fail, but the libraries needed for midas will be built

cd ../midas
make cmake...

K.O.
  1857   16 Mar 2020 Konstantin OlchanskiInfomhttpd mongoose 6.16 update
> > the update of mhttpd to mongoose version 6.16 was committed to the develop branch of midas.

Configuration is done by ODB /WebServer:

---------------------------------------------------------------------------
[local:javascript1:S]/WebServer>ls -l
Key name                        Type    #Val  Size  Last Opn Mode Value
---------------------------------------------------------------------------
mime.types                      DIR
Enable localhost port           BOOL    1     4     2h   0   RWD  y
localhost port                  INT     1     4     2h   0   RWD  8080
localhost port passwords        BOOL    1     4     2h   0   RWD  n
Enable insecure port            BOOL    1     4     12h  0   RWD  n
insecure port                   INT     1     4     2h   0   RWD  8081
insecure port passwords         BOOL    1     4     2h   0   RWD  y
insecure port host list         BOOL    1     4     2h   0   RWD  y
Enable https port               BOOL    1     4     12h  0   RWD  n
https port                      INT     1     4     2h   0   RWD  8443
https port passwords            BOOL    1     4     2h   0   RWD  y
https port host list            BOOL    1     4     2h   0   RWD  y
Host list                       STRING  10    32    2h   0   RWD
                                        [0]             localhost
                                        [1]
                                        [2]
                                        [3]
                                        [4]
                                        [5]
                                        [6]
                                        [7]
                                        [8]
                                        [9]
Enable IPv6                     BOOL    1     4     2h   0   RWD  y
Proxy                           DIR
---------------------------------------------------------------------------

Most entries are self-obvious, but note:

- mime.types contains the mapping of file extensions of file content-type telling browser what to do:

---------------------------------------------------------------------------
[local:javascript1:S]/WebServer>ls -l mime.types/
Key name                        Type    #Val  Size  Last Opn Mode Value
---------------------------------------------------------------------------
.HTML                           STRING  1     10    2h   0   RWD  text/html
.HTM                            STRING  1     10    2h   0   RWD  text/html
.CSS                            STRING  1     9     2h   0   RWD  text/css
---------------------------------------------------------------------------

- Proxy directory configures the http proxy (as implemented by mongoose, I am
not sure if I understand all limitations):

---------------------------------------------------------------------------
[local:javascript1:S]/WebServer>ls -l Proxy/
Key name                        Type    #Val  Size  Last Opn Mode Value
---------------------------------------------------------------------------
example                         STRING  1     27    17h  0   RWD  #http://localhost:8080
---------------------------------------------------------------------------

("#" means - commented-out)

http://localhost:8080/proxy/example/foo/bar/baz proxies to http://localhost:8080/foo/bar/baz

- "Enable IPv6" tells mhttpd to also listen on the IPv6 ports. The best I can tell IPv6 works on the Mac,
and with luck will get some testing at CERN where IPv6 is in use.

Documentation on the midas wiki still needs to be updated for this.
K.O.
  1856   16 Mar 2020 Konstantin OlchanskiInfomhttpd mongoose 6.16 update
> the update of mhttpd to mongoose version 6.16 was committed to the develop branch of midas.

The new code implements 3 http ports:

- localhost port 8080 - enabled by default - suitable for "I want to test midas on my laptop" and for connecting from the apache httpd
https password protected gateway.

- insecure http port 8081 - disabled by default - with optional password protection (HTTP Digest auth), and optional hostlist access
control - for the case when the https gateway is running on a different computer (i.e. ALPHA at CERN).

(My reading of "internet opinions" about HTTP Digest authentication over unencrypted HTTP is
that while considered very obsolete, there are no specific security problems and exploits
against it - other than the usual - man-in-the-middle and "steal the password file" attacks.
So while I do not recommend using it, I do not feel justified to remove/disable it on security grounds.
It provides an alternative password protection when use of SSL/HTTPS is too difficult).

- https port 8443 - disabled by default - also with optional password protection (HTTP Digest auth), and optional hostlist access
control. HTTP Digest password protection over HTTPS is deemed as secure at "HTTP Basic" password protection over HTTPS and
that is what is used by apache httpd password protection.

(The main problem with mhttpd support of HTTPS is obtaining an https certificate. Right now mhttpd
instructs the user to generate a self-signed certificate. But there is 2 problems: modern browsers dislike self-signed
certificates (even when explicitely marked "trust it!") and there is no check for certificate expiration.
I guess one could try to integrate mhttpd with certbot and the let's-encrypt system, but there
is problems, i.e. the certificate files live in readable-only-by-root directories, etc. I would rather
wait until mongoose implement certbot integration in their code).

More later...
K.O.
  1855   16 Mar 2020 Konstantin OlchanskiInfomhttpd mongoose 6.16 update
the update of mhttpd to mongoose version 6.16 was committed to the develop branch of midas. If you do not want to use this 
updated code or if it causes problems, please use the mhttpd6 executable or midas from the midas-2020-03 release branch.

new features:

- IPv6 support
- built-in http proxy
- fine grain locking - serving "resource" files (html, css, etc) and serving json-rpc requests no longer takes the global lock
- reduced number of DNS queries when checking host list access (DNS replies are cached)
- (I decided to not implement caching of password requests and dynamic reload of password file - it is too hard).

internal changes:

Recent versions of the mongoose web server library have removed all their internal multithreading,
leaving the library fully single-threaded. This resulted in major simplification of many things. An improvement.
(the civetweb fork of mongoose retains the old multithreading code, that model seems to work better
which used inside ROOT). As implemented in mhttpd, all network connections are handled by the main thread,
all midas http requests are handled by worker threads that are started on the as-needed basis.

The old mongoose 6.4 based mhttpd code survived almost without changes - as a compile-time
option - so now I build 2 mhttpd executables: mhttpd with the new code and mhttpd6 with the old code
so people have something to run in case the new code bombs.

http proxy:

Experiments that use private networks usually configure the apache httpd as a web proxy to allow
access from the outside to the web-controlled devices on the private network. Making changes
to this proxy requires root access, requires restarting httpd, etc. To make things simpler, mhttpd now
includes a web proxy (almost the complete implementation is provided by the mongoose library). Configuration
is done from ODB, restarting mhttpd is not needed.

improved multithreading:

Since most of the MIDAS library is now thread-safe, mhttpd no longer needs to take the "big midas lock"
to service most web requests. Access to files, access to ODB, etc is now fully threaded. Some parts
of MIDAS are not thread-safe, i.e. access to history and log files, so a flag was added to the mjsonrpc library
to mark which RPC methods are not thread-safe.

Note that despite these improvements, mhttpd still suffers from "http head-of-queue blocking"
https://en.wikipedia.org/wiki/Head-of-line_blocking
because (i.e. the google chrome web browser) tends to use just 1 TCP connection for all JSONRPC requests,
after a request for a history read (can take a long time), all subsequent requests for web page updates, etc
will have to wait until it completes, causing unresponsive user experience. (it looks as if mhttpd is single-threaded!).

A solution for this problem is HTTP/2, which is not yet implemented by mongoose and is not quite yet available
for apache httpd.

More later...
K.O.
  1854   16 Mar 2020 Konstantin OlchanskiReleasemidas-2020-03-a
midas-2020-03-a is here.

Accumulated changes and bug fixes since last tag midas-2019-09-i.

After this release, expect some instability on the develop branch as I commit the update of mhttpd to mongoose web server library 
version 6.16. More on that later.

To obtain this release, either checkout the top of branch release/midas-2020-03 (recommended)
or checkout the tag midas-2020-03-a.

K.O.
  1853   16 Mar 2020 Pintaudi GiorgioInfoMIDAS will use C++11
About the boost library, that is exactly 
what I did for a project of mine (the 
calibration software for the WAGASCI 
experiment). It turned out not so easy to 
mantain because different Linux distros 
package different versions of boost.

The reason I went down the "c++11 plus 
boost" road is that the official T2K OS 
is CentOS7 as well.

Looking back I think that using c++17 and 
requiring a more recent version of the 
compiler is much easier to maintain than 
the combo c++11 + boost. In CentOS is 
just a matter of installing a recent 
devtool package ...

Another solution might be too repackage 
boost into MIDAS so you have full control 
of the environment.

> > After much discussion, and following 
the MIDAS workshop at TRIUMF, we made the 
decision to use C++11 in MIDAS.
> > 
> > There are many benefits, and only one 
drawback - no c++11 compilers in the 
default OS install on older computers 
(i.e. 
> > RHEL/SL/CentOS before el7). (the same 
applies to our use of cmake).
> >
> 
> It turns out that support for the c++11 
"regex" feature is missing on el7 
(CentOS-7, our most common platform at 
TRIUMF).
> 
> According to 
https://stackoverflow.com/questions/12530
406/is-gcc-4-8-or-earlier-buggy-about-
regular-expressions
> gcc 4.9.0 is the first one to implement 
c++11 regular expressions. el7 comes with 
gcc-4.8.5 and I confirm
> that examples of using 
std::regex_replace() do not compile. I 
was looking to use std::regex_replace to 
implement URL rewriting
> in the reverse proxy code in mhttpd.
> 
> I do not need this feature immediately, 
but I am surprised that such a thing can 
happen, thought others should know.
> 
> K.O.
  1852   16 Mar 2020 Konstantin OlchanskiInfoMIDAS will use C++11
> After much discussion, and following the MIDAS workshop at TRIUMF, we made the decision to use C++11 in MIDAS.
> 
> There are many benefits, and only one drawback - no c++11 compilers in the default OS install on older computers (i.e. 
> RHEL/SL/CentOS before el7). (the same applies to our use of cmake).
>

It turns out that support for the c++11 "regex" feature is missing on el7 (CentOS-7, our most common platform at TRIUMF).

According to https://stackoverflow.com/questions/12530406/is-gcc-4-8-or-earlier-buggy-about-regular-expressions
gcc 4.9.0 is the first one to implement c++11 regular expressions. el7 comes with gcc-4.8.5 and I confirm
that examples of using std::regex_replace() do not compile. I was looking to use std::regex_replace to implement URL rewriting
in the reverse proxy code in mhttpd.

I do not need this feature immediately, but I am surprised that such a thing can happen, thought others should know.

K.O.
  1851   10 Mar 2020 Konstantin OlchanskiInfoMIDAS vs JSROOT web pages
Just FYI, I am looking at the ROOT web programming component JSROOT and I notice that the RPC mechanism quite different from the JSON-
RPC I implemented for MIDAS.

https://github.com/root-project/jsroot/blob/master/docs/HttpServer.md (explanation of JSROOT RPC and server side machinery)
https://github.com/root-project/jsroot/blob/master/docs/JSROOT.md (explanation of JSROOT javascript library)

Then I looked at the dates:
MIDAS mjsonrpc was done at the end of 2013
JSROOT main development started at the end of 2014.

The web server component in both projects is (almost) the same - vanilla mongoose in mhttpd
and civetweb, a fork of an older version of mongoose, in ROOT/JSROOT.

The web server in both projects is partially multithreaded:
- ROOT THttpServer/TCivetWeb uses multiple threads to handle the network connections and some file access,
but interaction with ROOT is done in the main thread of ROOT. (The main thread must periodically call ProcessRequests()).
- mhttpd uses a single thread to multiplex the network connections (it is a change from old mongoose/civetweb to current mongoose 6.16),
but all requests are farmed to a pool of threads and execute in parallel (unless not thread-safe, i.e. accessing history files).

Both implementations suffer from "head of queue" blocking, a "slow" request i.e. a slow file read, will
delay subsequent quick requests, see https://en.wikipedia.org/wiki/Head-of-line_blocking#In_HTTP
Solution for this problem is to use HTTP/2 when it becomes supported in mongoose/civetweb/apache httpd (in el7).

It will be interesting to see which on of the two systems works better for building "user facing" web pages... especially
hybrid pages that have to pull data both from midas (using mjsonrpc) and from online ROOT analyzers (using jsroot).

K.O.
ELOG V3.1.4-2e1708b5