11 Oct 2021, Konstantin Olchanski, Forum, test
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test, no email. K.O. |
11 Oct 2021, Konstantin Olchanski, Forum, test
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> test, no email. K.O.
test reply, no email. K.O. |
11 Oct 2021, Konstantin Olchanski, Forum, test
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> > test, no email. K.O.
>
> test reply, no email. K.O.
test attachment, no email. K.O. |
11 Oct 2021, Konstantin Olchanski, Forum, test
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> > > test, no email. K.O.
> >
> > test reply, no email. K.O.
>
> test attachment, no email. K.O.
test email. K.O. |
11 Oct 2021, Konstantin Olchanski, Forum, midas forum updated, moved
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The midas forum software (elogd) was updated to latest version and moved from our old server
(ladd00.triumf.ca) to our new server (daq00.triumf.ca).
The following URLs should work:
https://daq00.triumf.ca/elog-midas/Midas/ (new URL)
https://midas.triumf.ca/elog/Midas/ (old URL, redirects to daq00)
https://midas.triumf.ca/forum (link from midas wiki)
The configuration on the old server ladd00.triumf.ca is quite tangled between
several virtual hosts and several DNS CNAMEs. I think I got all the redirects
correct and all old URLs and links in old emails & etc still work.
If you see something wrong, please reply to this message here or email me directly.
K.O. |
26 Jan 2022, Konstantin Olchanski, Forum, .gz files
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> I adapted our analyzer to compile against the manalyzer included in the midas repo.
> TMReadEvent: error: short read 0 instead of -1193512213
I think this problem is fixed in the latest version of midasio and manalyzer, but this update
was not pulled into midas yet. (Canada is in the middle of a covid wave since December).
What happens is you do not have the gzip library installed on your computer and
your analyzer is built without support for gzip.
The fix is done the hard way, the gzip library is no longer optional, but required.
You do not say what linux you use, so I cannot give exact instructions, but for:
ubuntu: apt -y install libz-dev
centos7: installed by default
centos8: installed by default
debian11/raspbian: same as ubuntu
K.O. |
26 Jan 2022, Konstantin Olchanski, Forum, Device driver for modbus
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> Dear all, does anyone have an example of for a device driver using modbus or modbus tcp to communicate with a device and willing to share it? Thanks.
I have not seen any modbus devices recently, so all my code and examples are quite old.
Basic modbus/tcp communication driver is in the midas repo:
daq00:midas$ find . | grep -i modbus
./drivers/divers/ModbusTcp.cxx
./drivers/divers/ModbusTcp.h
daq00:midas$
This driver worked for communication to a modbus PLC (T2K/ND280/TPC experiment in Japan).
An example program to use this driver and test modbus communication is here:
https://bitbucket.org/expalpha/agdaq/src/master/src/modbus.cxx
Because at the end, we do not have any modbus devices in any recent experiment,
I do not have any example of using this driver in the midas frontend. Sorry.
K.O. |
26 Jan 2022, Konstantin Olchanski, Bug Report, Writting MIDAS Events via FPGAs
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> today I did not get the data into MIDAS.
Any error messages printed by the frontend? any error message in midas.log? core dumps? crashes?
I do not understand what you mean by "did not get the data into midas". You create events
and send them to a midas event buffer and you do not see them there? With mdump?
Do you see this both connected locally and connected remotely through the mserver?
BTW, I see you are using the mfe.c frontend. Event data handling in mfe.c frontends
is quite convoluted and impossible to straighten out. I recommend that you use
the tmfe c++ frontend instead. Event data handling is much simplified and is easier to debug
compared to the mfe.c frontend. There is examples in the midas repository and there are
tutorials for converting frontends from mfe.c to tmfe posted in this forum here.
BTW, the commit you refer to only changed some html files, could not have affected
your data.
K.O. |
26 Jan 2022, Konstantin Olchanski, Bug Report, some frontend kicked by cm_periodic_tasks
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> The problem is that eventually some of frontend closed with message
> :19:22:31.834 2021/12/02 [rootana,INFO] Client 'Sample Frontend38' on buffer
> 'SYSMSG' removed by cm_periodic_tasks because process pid 9789 does not exist
This messages means what it says. A client was registered with the SYSMSG buffer and this
client had pid 9789. At some point some other client (rootana, in this case) checked it and
process pid 9789 was no longer running. (it then proceeded to remove the registration).
There is 2 possibilities:
- simplest: your frontend has crashed. best to debug this by running it inside gdb, wait for
the crash.
- unlikely: reported pid is bogus, real pid of your frontend is different, the client
registration in SYSMSG is corrupted. this would indicate massive corruption of midas shared
memory buffers, not impossible if your frontend misbehaves and writes to random memory
addresses. ODB has protection against this (normally turned off, easy to enable, set ODB
"/experiment/protect odb" to yes), shared memory buffers do not have protection against this
(should be added?).
Do this. When you start your frontend, write down it's pid, when you see the crash message,
confirm pid number printed is the same. As additional test, run your frontend inside gdb,
after it crashes, you can print the stack trace, etc.
>
> in the meantime mserver loggging :
> mserver started interactively
> mserver will listen on TCP port 1175
> double free or corruption (!prev)
> double free or corruption (!prev)
> free(): invalid next size (normal)
> double free or corruption (!prev)
>
Are these "double free" messages coming from the mserver or from your frontend? (i.e. you run
them in different terminals, not all in the same terminal?).
If messages are coming from the mserver, this confirms possibility (1),
except that for frontends connected remotely, the pid is the pid of the mserver,
and what we see are crashes of mserver, not crashes of your frontend. These are much harder to
debug.
You will need to enable core dumps (ODB /Experiment/Enable core dumps set to "y"),
confirm that core dumps work (i.e. "killall -SEGV mserver", observe core files are created
in the directory where you started the mserver), reproduce the crash, run "gdb mserver
core.NNNN", run "bt" to print the stack trace, post the stack trace here (or email to me
directly).
>
> I can find some correlation between number of events/event size produced by
> frontend, cause its failed when its become big enough.
>
There is no limit on event size or event rate in midas, you should not see any crash
regardless of what you do. (there is a limit of event size, because an event has
to fit inside an event buffer and event buffer size is limited to 2 GB).
Obviously you hit a bug in mserver that makes it crash. Let's debug it.
One thing to try is set the write cache size to zero and see if your crash goes away. I see
some indication of something rotten in the event buffer code if write cache is enabled. This
is set in ODB "/Eq/XXX/Common/Write Cache Size", set it to zero. (beware recent confusion
where odb settings have no effect depending on value of "equipment_common_overwrite").
>
> frontend scheme is like this:
>
Best if you use the tmfe c++ frontend, event data handling is much simpler and we do not
have to debug the convoluted old code in mfe.c.
K.O.
>
> poll event time set to 0;
>
> poll_event{
> //if buffer not transferred return (continue cutting the main buffer)
> //read main buffer from hardware
> //buffer not transfered
> }
>
> read event{
> // cut the main buffer to subevents (cut one event from main buffer) return;
> //if (last subevent) {buffer transfered ;return}
> }
>
> What is strange to me that 2 frontends (1 per remote pc) causing this.
>
> Also, I'm executing one FEcode with -i # flag , put setting eventid in
> frontend_init , and using SYSTEM buffer for all.
>
> Is there something I'm missing?
> Thanks.
> A. |
26 Jan 2022, Konstantin Olchanski, Bug Report, Off-by-one in sequencer documentation
|
> > 3 LOOP n,4
> > 4 MESSAGE $n,1
> > 5 ENDLOOP
>
> Indeed you're right. The loop variable runs from 1...n. I fixed that in the documentation.
Shades/ghosts of FORTRAN. c/c++/perl/python loops loop from 0 to n-1.
K.O. |
26 Jan 2022, Konstantin Olchanski, Info, MityCAMAC Login
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For those curious about CAMAC controllers, this one was built around 2014 to
replace the aging CAMAC A1/A2 controllers (parallel and serial) in the TRIUMF
cyclotron controls system (around 50 CAMAC crates). It implements the main
and the auxiliary controller mode (single width and double width modules).
The design predates Altera Cyclone-5 SoC and has separate
ARM processor (TI 335x) and Cyclone-4 FPGA connected by GPMC bus.
ARM processor boots Linux kernel and CentOS-7 userland from an SD card,
FPGA boots from it's own EPCS flash.
User program running on the ARM processor (i.e. a MIDAS frontend)
initiates CAMAC operations, FPGA executes them. Quite simple.
K.O. |
26 Jan 2022, Konstantin Olchanski, Forum, Issue in data writing speed
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Francesco, when you say "writing an event is slow", do you mean it in the frontend
or in the output data file?
Stefan is quite right about the data file, it can take seconds between generating
an event in the frontend and seeing it written to the data file. (if compression
buffers are too big, an event can sit there forever, until pushed out by next events
or by run stop).
But maybe you see this on the frontend side.
What you are looking at is "real time" performance of the frontend and of the linux kernel.
The mfe.c frontend has many problems with real time performance, it can stall and take a long
time between calls to read_event(), for many reasons.
There are ways around that, but it is simpler to switch to the tmfe c++ frontend
that was designed for good real time performance.
In the tmfe frontend, if you use the polled equipment and enable the poll thread,
your frontend will be limited only by the linux kernel real time performance (i.e.
on a single-core CPU, other programs will delay execution of your frontend
and you will see it as long delays (usec, millisec) between calls to your read_event().
Next limit to real time performance (common to mfe.c and tmfe frontends) is the writing
of event data to the midas shared event buffer. One has to lock the shared memory semaphore
and this has to wait until other users of the event buffer finish their reading
or writing and unlock it. Arbitrary amount of time (usec, millisec, sec) can pass.
(there is also problems with "fairness" of the linux semaphores, a different story, again).
Making things more interesting, midas event buffers implement a write cache (default size 100 kbytes),
events smaller than the cache are quickly accumulated (no need to lock the shared memory semaphore),
them flushed to shared memory when cache is full. This is done to reduce the number
of shared memory semaphore locks per event, in the case of very high rate of very small events.
Solution to all this is to use 2 threads: read the data from hardware in one thread and write the data to midas
in a different thread. Between the threads would be an event fifo (circular buffer in mfe.c,
std::deque<EVENT> in tmfe c++ frontends).
For remote connected frontends, things are a bit different. Event data is written directly
into the TCP socket and as long as socket buffers are big enough, there is no real-time delays,
unless SYSTEM buffer is very congested and mserver does not read the TCP socket quickly enough.
So depending on event size, data rate and tcp socket buffer size, the extra 2nd thread
may not be necessary and poll thread real time performance may be good enough.
I hope this clarifies the situation somewhat.
K.O.
> Dear all,
> I've a frontend writing a quite big bunch of data into a MIDAS bank (16bit output from a 4MP photo camera).
> I'm experiencing a writing speed problem that I don't understand. When the photo camera is triggered at a low rate (< 2 Hz)
> writing into the bank takes a very short time for each event (indeed, what I measure is the time to write and go back
> into the polling function). If I increase the rate to 4 Hz, I see that writing the first two events takes a sort time,
> but the third event takes a very long time (hundreds of ms), then again the fourth and fifth events are very fast, and
> the sixth is very slow. If I further increase the rate, every other event is very slow. The problem is not in the readout
> of the camera, because if I just remove the bank writing and keep the camera readout, the problem disappears. Can you
> explain this behavior? Is there any way to improve it?
>
> Below you can also find the code I use to copy the data from the camera buffer into the bank. If you have any suggestion
> to improve it, it would be really appreciated.
>
> Thank you very much,
> Francesco
>
>
>
> const char* pSrc = (const char*)bufframe.buf;
>
> for(int y = 0; y < bufframe.height; y++ ){
>
> //Copy one row
> const unsigned short* pDst = (const unsigned short*)pSrc;
>
> //go through the row
> for(int x = 0; x < bufframe.width; x++ ){
>
> WORD tmpData = *pDst++;
>
> *pdata++ = tmpData;
>
> }
>
> pSrc += bufframe.rowbytes;
>
> }
> |
26 Jan 2022, Konstantin Olchanski, Forum, Issue in data writing speed
|
> Francesco, when you say "writing an event is slow", do you mean it in the frontend
> or in the output data file?
Another explanation just occurred to me. We do not know your event size and we do not
know the size of your SYSTEM buffer. But if you have an unlucky combination,
this can happen:
Consider event size is 6 Mbytes, buffer size is 8 Mbytes, enough space for only 1 event.
First event is written quickly (buffer is empty).
Second event will be delayed, there is not enough free space in the buffer, we have
to wait for mlogger to finish reading the first event.
Same thing happens if event size is 3 Mbytes, the first 2 events will write quickly,
writing the 3rd event will be delayed until mlogger does it's thing.
The mlogger reads the SYSTEM buffer "fast" and "quickly", but it can be delayed
for a number of reasons, i.e. handling a history event, a delay writing to disk,
a delay writing to network connected storage, etc.
In general, it is best to size the SYSTEM buffer to hold about 1 second worth
of data (of average size, average rate). If your event size is 4 Mbytes, and you
record them at 10/sec, SYSTEM buffer should be at least 40 Mbytes big. (this is
set in ODB /Experiment/Buffer Sizes). (MIDAS event buffer size is limited to 2 GBytes).
K.O. |
26 Jan 2022, Konstantin Olchanski, Bug Report, Off-by-one in sequencer documentation
|
> > Shades/ghosts of FORTRAN. c/c++/perl/python loops loop from 0 to n-1.
>
> for (i=1 ; i<=10 ; i++); ;-)
Similar code made big news just recently: (scroll down to the example main() program)
https://blog.qualys.com/vulnerabilities-threat-research/2022/01/25/pwnkit-local-privilege-escalation-
vulnerability-discovered-in-polkits-pkexec-cve-2021-4034
I forget if the FORTRAN rules were "loop once" or "never loop" or if it was different
between Fortran-4, fortran-77, DEC extensions and IBM extension, or if it was a compiler switch.
We should check that we do something reasonable with such loops to zero:
LOOP n,0
MESSAGE $n,1
ENDLOOP
P.S. Yup. "man g77" option "-fonetrip".
K.O. |
26 Jan 2022, Konstantin Olchanski, Bug Report, Writting MIDAS Events via FPGAs
|
>
> > Any error messages printed by the frontend? any error message in midas.log? core dumps? crashes?
> > I do not understand what you mean by "did not get the data into midas". You create events
> > and send them to a midas event buffer and you do not see them there? With mdump?
> > Do you see this both connected locally and connected remotely through the mserver?
>
> I simply don't see the event counter counting up and I also don't see them using mdump. No logs, no dumps and no crashes - every is quite. I only tested it locally.
>
If you are connected locally (no mserver), I want to know the value returned by bm_send_event(). Simplest
if you edit mfe.c and everywhere it calls bm_send_event() and rpc_send_event(), print the returned value.
It would be very interesting to see if bm_send_event() returns 1 (SUCCESS), but the event vanishes
without a trace.
Before you do that, try something simpler:
Run "mdump -s -d", it will print some event buffer internals.
Watch to see if any data pointers change when you send your events ("wp", "rp", etc).
If nothing changes at all, then we are not sending anything (fault is in your code or on mfe.c).
If you see "wp" counting up, then we definitely write your events into the buffer and mdump & mlogger should see them.
But there is some funny logic for event_id and trigger_mask and it is worth checking their
values. For a good test, set event_id=1 and trigger_mask=0x1. There might be trouble if either is set to zero.
K.O. |
26 Jan 2022, Konstantin Olchanski, Bug Report, Unknown Error 319 from client
|
> I’m trying to run MIDAS using a frontend code/client named “fetiglab”. Run stops
> after 2/3sec with an error saying “Unknown error 319 from client “fetiglab” on
> localhost.
actually run never starts.
> 11:46:32 [fetiglab,ERROR] [odb.cxx:11268:db_get_record,ERROR] struct size
> mismatch for "/" (expected size: 1, size in ODB: 41920)
this is the error that causes run start to fail. for reasons unknown
your frontend is trying to do a db_get_record() from "/" (ODB root top directory).
if this is an mfe.c frontend, I do not think I have ever seen it do something
like this.
so, a puzzle.
K.O. |
26 Jan 2022, Konstantin Olchanski, Forum, mhttpd error
|
> > Enable IPv6 y
>
> Probably the IPv6 problem, see here elog:2269
>
> I asked to turn off IPv6 by default, or at least mention this in the documentation,
> but unfortunately nothing happened.
But IPv4 and IPv6 code is completely separate, if IPv6 bind fails, IPv4 should still
work.
This is all very strange.
It does not help that the OP does not say in which way things do not work,
"the server is not accessible from other machines" is not an error message
reported by any browser, and we do not know what URL he is using
to access mhttpd - http: or https:
Also he is enabling the "insecure" port 8081, I am pretty sure the documentation
is pretty clear, either use the secure https port or the insecure port,
but not both at the same time.
In any case, I see current version of mongoose have removed support
for password files, so all this stuff will likely become reworked
and at the end mhttpd will only listen to localhost ports. To make it "accessible
to other machines", one will have to use the apache https proxy. (or mtpcproxy from
midas).
K.O. |
07 Feb 2022, Konstantin Olchanski, Forum, MidasWiki moved from ladd00 to daq00.triumf.ca and updated to MediaWiki 1.35
|
MidasWiki moved from ladd00 (obsolete SL6) to daq00.triumf.ca (Ubuntu LTS 20.04)
and updated from obsolete MediaWiki LTS 1.27.7 to MediaWiki LTS 1.35, supported
until mid-2023, see https://www.mediawiki.org/wiki/Version_lifecycle
Old URL https://midas.triumf.ca and https://midas.triumf.ca/MidasWiki/...
redirect to new URL https://daq00.triumf.ca/MidasWiki/index.php/Main_Page
All old links and bookmarks should continue to work (via redirect).
To report problems with this MediaWiki instance and to request
any changes in configuration or installed extensions, please reply to this
message here.
K.O. |
08 Feb 2022, Konstantin Olchanski, Bug Fix, ODBINC/Sequencer Issue
|
Please post the output of odbedit "ls -l" for /eq/ar.../variables. (you posted the
variable name as an image, and I cannot cut-and-paste the odb path!). BTW data size 4 is
correct, 4 bytes for INT32/UINT32/FLOAT. For DOUBLE it should be 8. For you it prints 32
and this is wrong, we need to see the output of "ls -l".
K.O. |
09 Feb 2022, Konstantin Olchanski, Bug Fix, ODBINC/Sequencer Issue
|
>
> [local:mu3eMSci:S]/>cd Equipment/ArduinoTestStation/Variables
> [local:mu3eMSci:S]Variables>ls -l
> Key name Type #Val Size Last Opn Mode Value
> ---------------------------------------------------------------------------
> _T_ FLOAT 1 4 1h 0 RWD 20.93
> _F_ FLOAT 1 4 1h 0 RWD 12.8
> _P_ FLOAT 1 4 1h 0 RWD 56
> _S_ FLOAT 1 4 1h 0 RWD 5
> _H_ FLOAT 1 4 60h 0 RWD 44.74
> _B_ FLOAT 1 4 60h 0 RWD 18.54
> _A_ FLOAT 1 4 1h 0 RWD 14.41
> _RH_ FLOAT 1 4 1h 0 RWD 41.81
> _AT_ FLOAT 1 4 1h 0 RWD 20.46
> SP INT16 1 2 1h 0 RWD 10
>
This looks okey, so we still have no explanation for your error. Please post your sequencer
script?
K.O. |
|