ID |
Date |
Author |
Topic |
Subject |
1939
|
05 Jun 2020 |
Stefan Ritt | Suggestion | ODB++ API - documantion updates and odb view after key creation | Hi Marius,
your fix is good. Thanks for digging out this deep-lying issue, which would have haunted us if we would not fix it.
The problem is that in midas, the "BOOL" type is 4 Bytes long, actually modelled after MS Windows. Now I realized
that in c++, the "bool" type is only 1 Byte wide. So if we do the memcopy from a "c++ bool" to a "MIDAS BOOL", we
always copy four bytes, meaning that we copy three Bytes beyond the one-byte value of the c++ bool. So your fix
is absolutely correct, and I added it in one more space where we deal with bool arrays, where we need the same.
What I don't understand however is the fact why this fails for you. The ODB values are stored in the C union under
union {
...
bool m_bool;
double m_double;
std::string *m_string;
...
}
Now the C compiler puts all values at the lowest address, so m_bool is at offset zero, and the string pointer reaches
over all eight bytes (we are on 64-bit OS).
Now when I initialize this union in odbxx.h:66, I zero the string pointer which is the widest object:
u_odb() : m_string{} {};
which (at least on my Mac) sets all eight bytes to zero. If I then use the wrong code to set the bool value to the ODB
in odbxx.cxx:756, I do
db_set_data_index(... &u, rpc_tid_size(m_tid), ...);
so it copies four bytes (=rpc_tid_size(TID_BOOL)) to the ODB. The first byte should be the c++ bool value (0 or 1),
and the other three bytes should be zero from the initialization above. Apparently on your system, this is not
the case, and I would like you to double check it. Maybe there is another underlying problem which I don't understand
at the moment but which we better fix.
Otherwise the change is committed and your code should work. But we should not stop here! I really want to understand
why this is not working for you, maybe I miss something.
Best,
Stefan
> Hi Stefan,
>
> your test program was only working for me after I changed the following lines inside the odbxx.cpp
>
> diff --git a/src/odbxx.cxx b/src/odbxx.cxx
> index 24b5a135..48edfd15 100644
> --- a/src/odbxx.cxx
> +++ b/src/odbxx.cxx
> @@ -753,7 +753,12 @@ namespace midas {
> }
> } else {
> u_odb u = m_data[index];
> - status = db_set_data_index(m_hDB, m_hKey, &u, rpc_tid_size(m_tid), index, m_tid);
> + if (m_tid == TID_BOOL) {
> + BOOL ss = bool(u);
> + status = db_set_data_index(m_hDB, m_hKey, &ss, rpc_tid_size(m_tid), index, m_tid);
> + } else {
> + status = db_set_data_index(m_hDB, m_hKey, &u, rpc_tid_size(m_tid), index, m_tid);
> + }
> if (m_debug) {
> std::string s;
> u.get(s);
>
> Likely not the best fix but otherwise I was always getting after running the test program:
>
> [ODBEdit,INFO] Program ODBEdit on host localhost started
> [local:Default:S]/>cd Equipment/Test/Settings/Test_odb_api/
> key not found
> makoeppe@office ~/mu3e/online/online (git)-[odb++_api] % test_connect
> Created ODB key /Equipment/Test/Settings
> Created ODB key /Equipment/Test/Settings/Test_odb_api
> Created ODB key /Equipment/Test/Settings/Test_odb_api/Divider
> Set ODB key "/Equipment/Test/Settings/Test_odb_api/Divider" = 1000
> Created ODB key /Equipment/Test/Settings/Test_odb_api/Enable
> Set ODB key "/Equipment/Test/Settings/Test_odb_api/Enable" = false
> Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api"
> Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Divider"
> Get ODB key "/Equipment/Test/Settings/Test_odb_api/Divider": 1000
> Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Enable"
> Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Divider"
> Get ODB key "/Equipment/Test/Settings/Test_odb_api/Divider": 1000
> Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Enable"
> Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> Datagenerator Enable is Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> false
> makoeppe@office ~/mu3e/online/online (git)-[odb++_api] % odbedit
> [ODBEdit,INFO] Program ODBEdit on host localhost started
> [local:Default:S]/>cd Equipment/Test/Settings/Test_odb_api/
> [local:Default:S]Test_odb_api>ls
> Divider 1000
> Enable y
>
> > > I am getting back false. Which looks nice but when I look into the odb via the browser the value is actually "y" meaning true which is stange.
> > > I added my frontend where I cleaned all function leaving only the frontend_init() one where I create this key. Its a cuda program but since
> > > I clean everything no cuda function is called anymore. |
1940
|
08 Jun 2020 |
Marius Koeppel | Suggestion | ODB++ API - documantion updates and odb view after key creation | Hi Stefan,
I agree with your explanation about the size of BOOL and bool.
I checked the program also on my Raspberry and there the old code works like on your mac. I don't really understand
why the behavior is different for my system. The initializing of the union should also work for my system.
At the moment I am using:
Arch Linux
Linux office 5.4.42-1-lts #1 SMP Wed, 20 May 2020 20:42:53 +0000 x86_64 GNU/Linux
gcc version 10.1.0 (GCC)
One thing which makes me a bit suspicious is that if I do:
u_odb u = m_data[index];
char dest[rpc_tid_size(m_tid)];
memcpy(dest, &u, rpc_tid_size(m_tid));
Clion tells me "Clang-Tidy: Undefined behavior, source object type 'midas::u_odb' is not TriviallyCopyable".
I am not sure if this is the problem since I am not so familiar with this TriviallyCopyable. I need to further investigate here.
So fare the update from my side.
Cheers,
Marius
> Hi Marius,
>
> your fix is good. Thanks for digging out this deep-lying issue, which would have haunted us if we would not fix it.
> The problem is that in midas, the "BOOL" type is 4 Bytes long, actually modelled after MS Windows. Now I realized
> that in c++, the "bool" type is only 1 Byte wide. So if we do the memcopy from a "c++ bool" to a "MIDAS BOOL", we
> always copy four bytes, meaning that we copy three Bytes beyond the one-byte value of the c++ bool. So your fix
> is absolutely correct, and I added it in one more space where we deal with bool arrays, where we need the same.
>
> What I don't understand however is the fact why this fails for you. The ODB values are stored in the C union under
>
> union {
> ...
> bool m_bool;
> double m_double;
> std::string *m_string;
> ...
> }
>
> Now the C compiler puts all values at the lowest address, so m_bool is at offset zero, and the string pointer reaches
> over all eight bytes (we are on 64-bit OS).
>
> Now when I initialize this union in odbxx.h:66, I zero the string pointer which is the widest object:
>
> u_odb() : m_string{} {};
>
> which (at least on my Mac) sets all eight bytes to zero. If I then use the wrong code to set the bool value to the ODB
> in odbxx.cxx:756, I do
>
> db_set_data_index(... &u, rpc_tid_size(m_tid), ...);
>
> so it copies four bytes (=rpc_tid_size(TID_BOOL)) to the ODB. The first byte should be the c++ bool value (0 or 1),
> and the other three bytes should be zero from the initialization above. Apparently on your system, this is not
> the case, and I would like you to double check it. Maybe there is another underlying problem which I don't understand
> at the moment but which we better fix.
>
> Otherwise the change is committed and your code should work. But we should not stop here! I really want to understand
> why this is not working for you, maybe I miss something.
>
> Best,
> Stefan
>
> > Hi Stefan,
> >
> > your test program was only working for me after I changed the following lines inside the odbxx.cpp
> >
> > diff --git a/src/odbxx.cxx b/src/odbxx.cxx
> > index 24b5a135..48edfd15 100644
> > --- a/src/odbxx.cxx
> > +++ b/src/odbxx.cxx
> > @@ -753,7 +753,12 @@ namespace midas {
> > }
> > } else {
> > u_odb u = m_data[index];
> > - status = db_set_data_index(m_hDB, m_hKey, &u, rpc_tid_size(m_tid), index, m_tid);
> > + if (m_tid == TID_BOOL) {
> > + BOOL ss = bool(u);
> > + status = db_set_data_index(m_hDB, m_hKey, &ss, rpc_tid_size(m_tid), index, m_tid);
> > + } else {
> > + status = db_set_data_index(m_hDB, m_hKey, &u, rpc_tid_size(m_tid), index, m_tid);
> > + }
> > if (m_debug) {
> > std::string s;
> > u.get(s);
> >
> > Likely not the best fix but otherwise I was always getting after running the test program:
> >
> > [ODBEdit,INFO] Program ODBEdit on host localhost started
> > [local:Default:S]/>cd Equipment/Test/Settings/Test_odb_api/
> > key not found
> > makoeppe@office ~/mu3e/online/online (git)-[odb++_api] % test_connect
> > Created ODB key /Equipment/Test/Settings
> > Created ODB key /Equipment/Test/Settings/Test_odb_api
> > Created ODB key /Equipment/Test/Settings/Test_odb_api/Divider
> > Set ODB key "/Equipment/Test/Settings/Test_odb_api/Divider" = 1000
> > Created ODB key /Equipment/Test/Settings/Test_odb_api/Enable
> > Set ODB key "/Equipment/Test/Settings/Test_odb_api/Enable" = false
> > Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api"
> > Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Divider"
> > Get ODB key "/Equipment/Test/Settings/Test_odb_api/Divider": 1000
> > Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Enable"
> > Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> > Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Divider"
> > Get ODB key "/Equipment/Test/Settings/Test_odb_api/Divider": 1000
> > Get definition for ODB key "/Equipment/Test/Settings/Test_odb_api/Enable"
> > Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> > Datagenerator Enable is Get ODB key "/Equipment/Test/Settings/Test_odb_api/Enable": false
> > false
> > makoeppe@office ~/mu3e/online/online (git)-[odb++_api] % odbedit
> > [ODBEdit,INFO] Program ODBEdit on host localhost started
> > [local:Default:S]/>cd Equipment/Test/Settings/Test_odb_api/
> > [local:Default:S]Test_odb_api>ls
> > Divider 1000
> > Enable y
> >
> > > > I am getting back false. Which looks nice but when I look into the odb via the browser the value is actually "y" meaning true which is stange.
> > > > I added my frontend where I cleaned all function leaving only the frontend_init() one where I create this key. Its a cuda program but since
> > > > I clean everything no cuda function is called anymore. |
1951
|
16 Jun 2020 |
Marius Koeppel | Suggestion | ODB++ API - documantion updates and odb view after key creation | Hi Stefan,
I played around with the code a bit more and I found out that if I do:
midas::odb test_settings = {{"Enable", false}};
test_settings.connect("/Equipment/Test/Test", true);
The correct value ends up in the odb. In this case an u_odb instance is created
with a clean m_string. But if I run the other code an odb instanceo is created and
the values of m_data are set in
odbxx.h:
odb(std::initializer_list<std::pair<const char *, midas::odb>> list) : odb() {...
This values are comming from u_odb instances since the code does:
odbxx.h:
auto o = new midas::odb(element.second);
and then
odbxx.h:
odb(T v):odb() {
m_num_values = 1;
m_data = new u_odb[1]{v};
m_tid = m_data[0].get_tid();
m_data[0].set_parent(this);
}
and looking at
odbxx.h:
u_odb(bool v) : m_bool{v}, m_tid{TID_BOOL}, m_parent_odb{nullptr} {};
only m_bool is set for this instance meaning that only the first byte gets a value
(still having only 1 byte for bool in c++). If I check m_string inside the u_odb::get function
of this instance I am getting for a bool (I set false) stuff like 0x7f6633f67a00 and for an int
(I set the int to 1000) 0x7f66000003e8. Since the size of BOOL is larger I am getting the
wrong value. I checked this also on openSUSE having the same behavior.
Like you I am not getting this problem on my Mac. What compiler flags do you use on your Mac?
Cheers,
Marius |
1956
|
23 Jun 2020 |
Stefan Ritt | Suggestion | ODB++ API - documantion updates and odb view after key creation | Hi Marius,
thanks for your help, you identified the problematic location. I changed that to
u_odb(bool v) : m_tid{TID_BOOL}, m_parent_odb{nullptr} {m_string = nullptr; m_bool = v;};
which should initialize the full 8 bytes of the u_odb union. I committed to develop. Can you
please give it a try?
Best,
Stefan
> and looking at
>
> odbxx.h:
> u_odb(bool v) : m_bool{v}, m_tid{TID_BOOL}, m_parent_odb{nullptr} {};
>
> only m_bool is set for this instance meaning that only the first byte gets a value
> (still having only 1 byte for bool in c++). If I check m_string inside the u_odb::get function
> of this instance I am getting for a bool (I set false) stuff like 0x7f6633f67a00 and for an int
> (I set the int to 1000) 0x7f66000003e8. Since the size of BOOL is larger I am getting the
> wrong value. I checked this also on openSUSE having the same behavior. |
1957
|
24 Jun 2020 |
Marius Koeppel | Suggestion | ODB++ API - documantion updates and odb view after key creation | Hi Stefan,
now everything works well (Tested on: OpenSuse and Arch Linux) :)
Thank you for the fix.
Cheers,
Marius
> Hi Marius,
>
> thanks for your help, you identified the problematic location. I changed that to
>
> u_odb(bool v) : m_tid{TID_BOOL}, m_parent_odb{nullptr} {m_string = nullptr; m_bool = v;};
>
> which should initialize the full 8 bytes of the u_odb union. I committed to develop. Can you
> please give it a try?
>
> Best,
> Stefan
>
>
> > and looking at
> >
> > odbxx.h:
> > u_odb(bool v) : m_bool{v}, m_tid{TID_BOOL}, m_parent_odb{nullptr} {};
> >
> > only m_bool is set for this instance meaning that only the first byte gets a value
> > (still having only 1 byte for bool in c++). If I check m_string inside the u_odb::get function
> > of this instance I am getting for a bool (I set false) stuff like 0x7f6633f67a00 and for an int
> > (I set the int to 1000) 0x7f66000003e8. Since the size of BOOL is larger I am getting the
> > wrong value. I checked this also on openSUSE having the same behavior. |
1981
|
12 Aug 2020 |
Yan Liu | Suggestion | adding db_get_mode ti check access mode for keys | Hello,
I am wondering if there is a function that checks the access mode for a key? I
found the db_set_mode() function that allows me to set the access mode for a key,
but failed to find its counterpart get function.
Thanks in advance,
Yan |
1982
|
13 Aug 2020 |
Stefan Ritt | Suggestion | adding db_get_mode ti check access mode for keys | > Hello,
>
> I am wondering if there is a function that checks the access mode for a key? I
> found the db_set_mode() function that allows me to set the access mode for a key,
> but failed to find its counterpart get function.
>
> Thanks in advance,
> Yan
KEY k;
db_get_key(hDB, handle, &k);
std::cout << k.access_mode << std::endl;
/Stefan |
1983
|
13 Aug 2020 |
Yan Liu | Suggestion | adding db_get_mode ti check access mode for keys | Thank you!
Yan
> > Hello,
> >
> > I am wondering if there is a function that checks the access mode for a key? I
> > found the db_set_mode() function that allows me to set the access mode for a key,
> > but failed to find its counterpart get function.
> >
> > Thanks in advance,
> > Yan
>
>
> KEY k;
> db_get_key(hDB, handle, &k);
> std::cout << k.access_mode << std::endl;
>
> /Stefan |
2011
|
06 Nov 2020 |
Alexandr Kozlinskiy | Suggestion | cmake build fixes | hi,
there are several problems with current cmake build files in midas:
- not all systems have cuda libs in /usr/local/cuda
- not all cmake version like when redefining vars
(i.e. redefining ROOT_CXX_FLAGS)
- c++ standard not matching the one used to build ROOT
- ROOTSYS is not needed to find ROOT (it is enough to have root in PATH)
I have posted pull request 'https://bitbucket.org/tmidas/midas/pull-requests/17'
which tries to fix some of the problems.
Tests and comments are welcome. |
2021
|
24 Nov 2020 |
Amy Roberts | Suggestion | ODBSET wildcards with array keys in Sequencer files | I'm interested in using the matching feature for ODBSET explained on
https://midas.triumf.ca/MidasWiki/index.php/Sequencer for settings that are in an
array, like:
COMMENT "Ground the detectors"
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[?]" 0
Currently I get an error when I try to run this script. Is this expected? Would it
be possible to implement matching for array values?
Thanks! |
2022
|
25 Nov 2020 |
Marco Francesconi | Suggestion | ODBSET wildcards with array keys in Sequencer files | Hi,
I guess the issue is in the "[?]" part of the command, the indexing is handled differently from the odb path and does not
support "?".
Are you trying to set only the first 9 channels?
Could you try with "[*]" or "[0-9]" instead?
Marco
> I'm interested in using the matching feature for ODBSET explained on
> https://midas.triumf.ca/MidasWiki/index.php/Sequencer for settings that are in an
> array, like:
>
> COMMENT "Ground the detectors"
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[?]" 0
>
> Currently I get an error when I try to run this script. Is this expected? Would it
> be possible to implement matching for array values?
>
> Thanks! |
2023
|
25 Nov 2020 |
Amy Roberts | Suggestion | ODBSET wildcards with array keys in Sequencer files | The following all fail with "Cannot find ODB key "<key>""
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
> Hi,
> I guess the issue is in the "[?]" part of the command, the indexing is handled differently from the odb path and does not
> support "?".
> Are you trying to set only the first 9 channels?
> Could you try with "[*]" or "[0-9]" instead?
>
> Marco
>
> > I'm interested in using the matching feature for ODBSET explained on
> > https://midas.triumf.ca/MidasWiki/index.php/Sequencer for settings that are in an
> > array, like:
> >
> > COMMENT "Ground the detectors"
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[?]" 0
> >
> > Currently I get an error when I try to run this script. Is this expected? Would it
> > be possible to implement matching for array values?
> >
> > Thanks! |
2024
|
25 Nov 2020 |
Marco Francesconi | Suggestion | ODBSET wildcards with array keys in Sequencer files | I created some keys in my ODB to try to match yours.
The ODBSET commands you wrote are all working fine (of course with different results), except only for the "/Detectors/Det*/Settings/Charge/Bias (V)*" which I will have to
look into.
In any case the error message I'm getting is "could not match ay key" and not the one you are reporting.
Now I'm a bit puzzled:
Are you sure your ODB contains those keys?
Are you testing the ODBSET inside a more complex sequencer or on its own?
Maybe I can try to reproduce it using your ODB setup.
Could you send an ODB dump of the "/Detectors" folder using the "save" command of odbedit ("cd /Detectors" and then "save detector.odb")?
Best,
Marco
> The following all fail with "Cannot find ODB key "<key>""
>
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
>
>
> > Hi,
> > I guess the issue is in the "[?]" part of the command, the indexing is handled differently from the odb path and does not
> > support "?".
> > Are you trying to set only the first 9 channels?
> > Could you try with "[*]" or "[0-9]" instead?
> >
> > Marco
> >
> > > I'm interested in using the matching feature for ODBSET explained on
> > > https://midas.triumf.ca/MidasWiki/index.php/Sequencer for settings that are in an
> > > array, like:
> > >
> > > COMMENT "Ground the detectors"
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[?]" 0
> > >
> > > Currently I get an error when I try to run this script. Is this expected? Would it
> > > be possible to implement matching for array values?
> > >
> > > Thanks! |
2025
|
25 Nov 2020 |
Amy Roberts | Suggestion | ODBSET wildcards with array keys in Sequencer files | I think the issue may be the version of MIDAS I'm using. Mine is current as of February 4, 2020.
But since then there have been changes to the sequencer code, specifically parts that handle indexing.
I'll try this out with an updated version of MIDAS and report back if there are still any issues after updating.
> I created some keys in my ODB to try to match yours.
> The ODBSET commands you wrote are all working fine (of course with different results), except only for the "/Detectors/Det*/Settings/Charge/Bias (V)*" which I will have to
> look into.
> In any case the error message I'm getting is "could not match ay key" and not the one you are reporting.
>
> Now I'm a bit puzzled:
> Are you sure your ODB contains those keys?
> Are you testing the ODBSET inside a more complex sequencer or on its own?
>
> Maybe I can try to reproduce it using your ODB setup.
> Could you send an ODB dump of the "/Detectors" folder using the "save" command of odbedit ("cd /Detectors" and then "save detector.odb")?
>
> Best,
>
> Marco
>
>
> > The following all fail with "Cannot find ODB key "<key>""
> >
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
> >
> >
> > > Hi,
> > > I guess the issue is in the "[?]" part of the command, the indexing is handled differently from the odb path and does not
> > > support "?".
> > > Are you trying to set only the first 9 channels?
> > > Could you try with "[*]" or "[0-9]" instead?
> > >
> > > Marco
> > >
> > > > I'm interested in using the matching feature for ODBSET explained on
> > > > https://midas.triumf.ca/MidasWiki/index.php/Sequencer for settings that are in an
> > > > array, like:
> > > >
> > > > COMMENT "Ground the detectors"
> > > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[?]" 0
> > > >
> > > > Currently I get an error when I try to run this script. Is this expected? Would it
> > > > be possible to implement matching for array values?
> > > >
> > > > Thanks! |
2026
|
27 Nov 2020 |
Konstantin Olchanski | Suggestion | ODBSET wildcards with array keys in Sequencer files | > The following all fail with "Cannot find ODB key "<key>""
>
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
> ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
>
It would be cool if ODB pattern matching in the sequencer
were consistent with the ODB pattern matching in the json-rpc
interface for web pages:
https://midas.triumf.ca/MidasWiki/index.php/Mjsonrpc#Supported_array_index_syntax
K.O. |
2034
|
27 Nov 2020 |
Konstantin Olchanski | Suggestion | cmake build fixes |
Hi, Alexandr, thank you for making improvements to MIDAS. I have some question
about your suggestions:
> there are several problems with current cmake build files in midas:
> - not all systems have cuda libs in /usr/local/cuda
> - not all cmake version like when redefining vars
we do not see these problems with the normal cmake on our current linux systems,
centos-7 and -8, Ubuntu LTS 18.04, 20.04.
so you have something different? can you be a bit more specific,
which version of cmake and which OS you have so see these troubles?
> - c++ standard not matching the one used to build ROOT
> - ROOTSYS is not needed to find ROOT (it is enough to have root in PATH)
Again ROOT tangles with the build of MIDAS.
MIDAS does not use ROOT. As a convenience to the users, we have a "ROOT output" driver
in mlogger and we build a special executable rmlogger with ROOT. Only this special
executable should be linked with ROOT and compiled with ROOT-specific flags.
The rest of the MIDAS build should not be affected by presence or absence of ROOT.
One would have to read old messages on this forum to understand this situation.
>
> I have posted pull request 'https://bitbucket.org/tmidas/midas/pull-requests/17'
> which tries to fix some of the problems.
> Tests and comments are welcome.
>
I look at the diffs:
- CUDA detection is changed to "find_package(CUDA)". This code was added by Joseph and Ben, and there
must be a reason why they did not use find_package(CUDA). They will have to sign-off on this change.
- ROOT related logic assumes that all of MIDAS will be built "the ROOT way". CFLAGS are changed, the C++
standard is changed, etc. this assumption is wrong. only rmlogger and rmana should be built "with ROOT".
If you want to follow through on this, I suggest that you split the pull request into two,
one pull request for the CUDA changes and one pull request for the ROOT changes. Also rework
your ROOT changes as I explained above (but also read all ROOT-related messages on this forum).
K.O. |
2038
|
30 Nov 2020 |
Marco Francesconi | Suggestion | ODBSET wildcards with array keys in Sequencer files | I totally agree that we should have a consistent formatting for array index expansion.
I had a look to the mjsonrpc code and I found the function parse_array_index_list(...) which does this job.
I have a similar function (adapted form previous code) in odb.cxx called strarrayindex(...) that is designed for the same "consistency" purposes between odbedit and sequencer.
Let me put few points that I noticed:
- mjsonrpc has a very different way to write the full array (no indexes given) while currently sequencer requires "[*]" to do the same (otherwise it only changes the first value of the array)
- currently the sequencer and the underlying ODB calls use two indexes (that are the same if you want to write only one key) so we will need a serious rewriting to allow something like "ODBSET array[1,3,5]"
- if I correctly understood the code, mjsonrpc instead generates a list of indices and then calls an ODB write on each of them. That's not always a good thing, for example if you are writing an array of n parameters on a DAQ
board you will call the hotlink on that key n times
- in addition to that the sequencer will also have to cope with variable-based indexes like "ODBSET array[$val]", but then how it should parse something like "[$a,1]" or "[$a*]"?
For the very first point I do not see a clean way to do this without breaking the compatibility of existing sequencers or having a difference between the two implementations.
For the others I guess we can find a way out, however that's a major modification so I will put it on my todo list when I can find some free time.
In any case I would propose to merge the two functions, so we have only to maintain a single implementation of the parsing.
I guess it's a good moment to brainstorm about that, let me know what you think
Marco
> > The following all fail with "Cannot find ODB key "<key>""
> >
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
> > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
> >
>
> It would be cool if ODB pattern matching in the sequencer
> were consistent with the ODB pattern matching in the json-rpc
> interface for web pages:
>
> https://midas.triumf.ca/MidasWiki/index.php/Mjsonrpc#Supported_array_index_syntax
>
> K.O. |
2040
|
30 Nov 2020 |
Stefan Ritt | Suggestion | ODBSET wildcards with array keys in Sequencer files | Hi Konstantin,
we are considering to make the range selection uniform among json, sequencer and
odbedit "set" command. Having multiple ranges like [1,4-5] will be quite some work, so
my question is did you just implement it on the json side because it was easy, or are
there experiments who really need it? Wouldn't it be enough to have
[*]
[n]
[n-m]
This way we always have only one db_set_data() value behind that. Any set of indices
we have to split into several db_set_data(), which especially for the front-end
configuration can cause trouble by triggering a hot link on each access.
Stefan |
2043
|
30 Nov 2020 |
Konstantin Olchanski | Suggestion | ODBSET wildcards with array keys in Sequencer files | > I totally agree that we should have a consistent formatting for array index expansion.
> I had a look to the mjsonrpc code and I found the function parse_array_index_list(...) which does this job.
Yes, it is good to review this stuff. I think the json-rpc call should accept more array index patterns:
a[*] - whole array (even though it is unnatural use in javascript, we do not say "let a[*] = b[*]", we say "let a = b".
a[5-] - from 5th element to the end (in the case we do not know the length)
a[-10] - from first element to element 10 (this is same as a[0-10], but needed for consistency with previous case).
K.O.
> I have a similar function (adapted form previous code) in odb.cxx called strarrayindex(...) that is designed for the same "consistency" purposes between odbedit and sequencer.
>
> Let me put few points that I noticed:
> - mjsonrpc has a very different way to write the full array (no indexes given) while currently sequencer requires "[*]" to do the same (otherwise it only changes the first value of the array)
> - currently the sequencer and the underlying ODB calls use two indexes (that are the same if you want to write only one key) so we will need a serious rewriting to allow something like "ODBSET array[1,3,5]"
> - if I correctly understood the code, mjsonrpc instead generates a list of indices and then calls an ODB write on each of them. That's not always a good thing, for example if you are writing an array of n parameters on a DAQ
> board you will call the hotlink on that key n times
> - in addition to that the sequencer will also have to cope with variable-based indexes like "ODBSET array[$val]", but then how it should parse something like "[$a,1]" or "[$a*]"?
>
> For the very first point I do not see a clean way to do this without breaking the compatibility of existing sequencers or having a difference between the two implementations.
> For the others I guess we can find a way out, however that's a major modification so I will put it on my todo list when I can find some free time.
> In any case I would propose to merge the two functions, so we have only to maintain a single implementation of the parsing.
>
> I guess it's a good moment to brainstorm about that, let me know what you think
>
> Marco
>
>
> > > The following all fail with "Cannot find ODB key "<key>""
> > >
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[*]" 0
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[0-9]" 0
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)[1]" 0
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)*" 0
> > > ODBSET "/Detectors/Det*/Settings/Charge/Bias (V)" 0
> > >
> >
> > It would be cool if ODB pattern matching in the sequencer
> > were consistent with the ODB pattern matching in the json-rpc
> > interface for web pages:
> >
> > https://midas.triumf.ca/MidasWiki/index.php/Mjsonrpc#Supported_array_index_syntax
> >
> > K.O. |
2044
|
30 Nov 2020 |
Konstantin Olchanski | Suggestion | ODBSET wildcards with array keys in Sequencer files | >
> we are considering to make the range selection uniform among json, sequencer and
> odbedit "set" command. Having multiple ranges like [1,4-5] will be quite some work, so
> my question is did you just implement it on the json side because it was easy, or are
> there experiments who really need it? Wouldn't it be enough to have
>
> [*]
> [n]
> [n-m]
>
It has been a long time, but most likely I designed the interface to work this
way to permit maximum flexibility for writing into an array using just one
rpc operation.
The generalized form is:
[range,range,range...]
where range is:
array index or
index1-index2 or
index2-index1 (write in reverse order)
This is all documented here:
https://midas.triumf.ca/MidasWiki/index.php/Mjsonrpc#Supported_array_index_syntax
I think it is too late to change it.
>
> This way we always have only one db_set_data() value behind that. Any set of indices
> we have to split into several db_set_data()
>
Sounds good. I think it is easy to have a common implementation:
One would need following functions:
parse range selection from string into std::vector<int> of array indices (we already have it)
call db_set_data_range() (this is easy to add).
>
> trouble by triggering a hot link on each access.
>
There is no escaping this trouble. Half the experiments want notification
"per array", the other half, "per array element". We cannot choose one or the other for them,
we have to provide a way for the user to say how they want it.
P.S. With existing ODB calls, you cannot do [n-m] ranges. You can do whole array or you
can do one-element-at-a-time.
K.O. |
|