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Entry  06 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate 
Dear friends,

We have some questions on using midas.
We use a Caen digitizer V1751 to take waveforms.
When testing with caen provided programs, we roughly know it can work fine at 1000 Hz event rate, and 30 M/s data can be written to disk.
The test with Midas, however, is a little confusing. We use CAENDigitizer library with Midas. First, it works, data were taken, and there seems no error.
The only problem is we cannot go to a higher event rate, for example we can only work on a rate of 40 Hz, and only 3 M/s data recording. Otherwise it will crush.

We may miss something really simple. Would you please give some suggestions? for example, other people's discussions or documents?

Thank you very much.
    Reply  09 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate 
Dear friends,

I may add a little more information.
For polling event, we check the data-ready register for the status of the digitizer.
In the readout routine, we create a bank, readout the data and write it out.

We commented out or made some replacement for each part of the subroutines to figure our where exactly goes wrong.
for example, replace the readout from the digitizer with a random generation of some fake events.
By replacing the readout by a random generation, the program runs fine and reach a very high event rates.

Any suggestions or ideas from experts?

Thank you very much.

--
Best regards,
Zhe Wang


> Dear friends,
> 
> We have some questions on using midas.
> We use a Caen digitizer V1751 to take waveforms.
> When testing with caen provided programs, we roughly know it can work fine at 1000 Hz event rate, and 30 M/s data can be written to disk.
> The test with Midas, however, is a little confusing. We use CAENDigitizer library with Midas. First, it works, data were taken, and there seems no error.
> The only problem is we cannot go to a higher event rate, for example we can only work on a rate of 40 Hz, and only 3 M/s data recording. Otherwise it will crush.
> 
> We may miss something really simple. Would you please give some suggestions? for example, other people's discussions or documents?
> 
> Thank you very much.
       Reply  10 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate frontend.c
Dear friends,

In case anyone need the source code, it is attached. 
We use optic fiber to connect to a VME controler, which talks to V1751 via VME bus.

--
Zhe Wang

> Dear friends,
> 
> I may add a little more information.
> For polling event, we check the data-ready register for the status of the digitizer.
> In the readout routine, we create a bank, readout the data and write it out.
> 
> We commented out or made some replacement for each part of the subroutines to figure our where exactly goes wrong.
> for example, replace the readout from the digitizer with a random generation of some fake events.
> By replacing the readout by a random generation, the program runs fine and reach a very high event rates.
> 
> Any suggestions or ideas from experts?
> 
> Thank you very much.
> 
> --
> Best regards,
> Zhe Wang
> 
> 
> > Dear friends,
> > 
> > We have some questions on using midas.
> > We use a Caen digitizer V1751 to take waveforms.
> > When testing with caen provided programs, we roughly know it can work fine at 1000 Hz event rate, and 30 M/s data can be written to disk.
> > The test with Midas, however, is a little confusing. We use CAENDigitizer library with Midas. First, it works, data were taken, and there seems no error.
> > The only problem is we cannot go to a higher event rate, for example we can only work on a rate of 40 Hz, and only 3 M/s data recording. Otherwise it will crush.
> > 
> > We may miss something really simple. Would you please give some suggestions? for example, other people's discussions or documents?
> > 
> > Thank you very much.
          Reply  13 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate frontend.c
Somehow I don't understand why people's reply is only in my mail box.
So I pasted them here. I hope they don't mind and these information may be useful for others.

The following is some discussion.
==========================================================================================
> In read_trigger_event(), you creating a secondary bank with time in
> second. For your information, this time in second is already written in
> the event header. You can retrieve the time using macros from the
> midas.h   time = TIME_STAMP(pevent)

Removed.

>
> In frontend_init() you loop over NFADC (1) and call for each loop
> frontend_config() after opening the device on that card. In
> frontend_config() you redo a loop over NFADC, meaning that in case of
> more than one card you will find the second one not open on the first
> frontend_config (ok for one card though).
>

Corrected.

> In frontend_config() what is the return sCAEN from MallocReadoutBuffer()?
> What is the size of the requested allocated buffer?

The return size of allocated buffer is 134936.

>
> What is the value of the sCAEN from the ReadData() function in
> read_trigger_event()?

It is always 0 for success until it crashes.
However, even for the event it crashes, it also appears as 0.

>
> I didn't check all the config parameters!
>
> What is the value of count in the poll_event(). It is true if the test
> in poll_event() is too short, it cause timing corruption during
> calibration. 

Do you mean Midas timing calibration for poll_event() before all finally start up?
We havn't observed corruption at this stage.

> This never happen during CAMAC time... to be fixed!
> The alternative is to include a ss_sleep(1) instead of the prescale.
> a 1ms delay between every poll is short enough to ensure your 1KHz trigger.

We tried ss_sleep(1) in poll_event(), and it doesn't help.
We also tried add a ss_sleep(10) in the read_trigger_event().
This may work. But we can only reach 100 Hz and 1 MB/s rate. Still low.

>
> How long do you spend in the read_trigger_event()? To be measured.

We add some timers in this part of the program.
The time spent on CAEN_DGTZ_ReadData is about 100 us.
To sleep 1 ms in read_trigger_event may delay the crush, but just one minute.
To sleep 10 ms works.

>
> I still don't understand your setup as you mention using optic fiber to
> access the VME controller? do you have a A3818 or similar to the
> controller? If so why don't you connect directly the optic to the VX1751
> and prevent the use of the VME backplane?

Our connect is:
A2818 (PCI) - fiber - V2718 (Bridge) - VME - V1751
We probably need to configure other vme boards through VME at the same time,
however, these boards don't have a fiber connection.

We also tested direct fiber connect for V1751 today.
But it crashes with the same symptom.
==========================================================================================
          Reply  13 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate 
Suggestion from John and my reply.

> We have achieved very high rates, but only with some care.

> The biggest issue was to make sure when you compile the CAEN driver for the A3818 board that you turn on the MIDAS switch.  Without that problems occur with some 
> probability given by the number of bytes processed - which translates into very soon if you have a high rate.  (The underlying cause is that both MIDAS and the A3818
> use unix Alarm signals, but the CAEN folks have a compile option to turn this off.)

> We use as little as possible of the CAENDigitizerLibrary - instead we program the registers directly on the board.

> There is still some kind of memory leak which we have not yet tracked down, so every few hours we shut down the frontend then restart it. 

We use A2818 (PCI) - fiber - V2718 (Bridge) - VME - V1751.
I actually didn't find a MIDAS switch in the Makefile.
             Reply  13 Jul 2016, Zhe Wang, Suggestion, Frontend crush on high event rate 

More suggestions from John and my reply.

> we also don't use the VME back plane - it's just too slow - mixing VME commands to plain modules and digitizer modules is unreliable....

> We use CAEN fiberoptic version 2 to talk to the digitizers directly, we have upto 12 digitizers, and can use all channels for several hours, and can fill to about 75% 
of the A3818 bandwidth... 

So far we are limitted to 30 MB/s, if tested with CAEN examples, for example, the wavedump program by CAEN.
I think is kind of the limit by IDE hard drive.
Unfortunately we are still far from that limit, only ~ 1 MB/s now.  :(
                Reply  30 Sep 2016, Konstantin Olchanski, Suggestion, Frontend crush on high event rate 
> 
> More suggestions from John and my reply.
> 
> > we also don't use the VME back plane - it's just too slow - mixing VME commands to plain modules and digitizer modules is unreliable....
> 
> > We use CAEN fiberoptic version 2 to talk to the digitizers directly, we have upto 12 digitizers, and can use all channels for several hours, and can fill to about 75% 
> of the A3818 bandwidth... 
> 
> So far we are limitted to 30 MB/s, if tested with CAEN examples, for example, the wavedump program by CAEN.
> I think is kind of the limit by IDE hard drive.
> Unfortunately we are still far from that limit, only ~ 1 MB/s now.  :(
>

From writing MIDAS frontends for many years, I am starting to form an opinion that this type of problem is undebuggable
in the current midas frontend framework - it is impossible to separate problems in vendor-supplied libraries and linux kernel modules
from problems with midas (i.e. incorrectly created data banks, too-small event buffers getting full) from problems with
bad interaction (collision over the SIGALARM handlers).

I am pondering on a new scheme for midas frontend writing. Perhaps such a new scheme should have a "no midas" mode where you can
compile and link a midas frontend "without midas", leaving you to debug just your code and the vendor code and their interactions.

K.O.
Entry  23 Aug 2016, Andreas Suter, Forum, Alarm/Warning 
Midas has a nice alarm system. I am wondering whether it is easily possible to
get the Alarm/Warning banner also on top of custom pages?!
    Reply  23 Aug 2016, Stefan Ritt, Forum, Alarm/Warning 
> Midas has a nice alarm system. I am wondering whether it is easily possible to
> get the Alarm/Warning banner also on top of custom pages?!

K.O. made nice JavaScript routines to access the alarm status. The new alarm page is completely 
made dynamically from JavaScript code (mhttpd does not supply any HTML code any more, only 
functions to obtain ODB values etc). Part of this new dynamic page must be some code to display 
the alarm status. You just need to copy this to your custom page. K.O. can tell you details.

Stefan
       Reply  30 Sep 2016, Konstantin Olchanski, Forum, Alarm/Warning 
> > Midas has a nice alarm system. I am wondering whether it is easily possible to
> > get the Alarm/Warning banner also on top of custom pages?!
> 
> K.O. made nice JavaScript routines to access the alarm status. The new alarm page is completely 
> made dynamically from JavaScript code (mhttpd does not supply any HTML code any more, only 
> functions to obtain ODB values etc). Part of this new dynamic page must be some code to display 
> the alarm status. You just need to copy this to your custom page. K.O. can tell you details.
> 

Yes, please look at resources/alarm.html and the "get_alarms" JSON-RPC method. The "get_alarms" example in 
resources/example.html probably already does exactly what you need. Also note the presence of "al_reset_alarm" and 
"al_trigger_alarm" JSON_RPC methods.

K.O.
Entry  09 Sep 2016, Amy Roberts, Suggestion, AJAX jmsg "get messages since t" ability - add to docs? 
I recently needed to watch the Midas messages for a particular error - and 
thus needed a command to "get all the messages since a time t".

The documentation (https://midas.triumf.ca/MidasWiki/index.php/AJAX#jmsg) 
documents a way to "get the most recent n messages" - but when I dug into the 
code, I was delighted to find that the existing Midas code also supports the 
"get all messages since t" query.

For the "get all messages since t" query, the parameter t should be the unix 
timestamp in seconds, and the parameter n should be zero: curl -X GET 
"http://localhost:8081/?cmd=jmsg&n=0&t=1473437918".

Pretty useful!  Perhaps this should be added to the AJAX documentation?
    Reply  30 Sep 2016, Konstantin Olchanski, Suggestion, AJAX jmsg "get messages since t" ability - add to docs? 
> I recently needed to watch the Midas messages for a particular error - and 
> thus needed a command to "get all the messages since a time t".
> 
> The documentation (https://midas.triumf.ca/MidasWiki/index.php/AJAX#jmsg) 
> documents a way to "get the most recent n messages" - but when I dug into the 
> code, I was delighted to find that the existing Midas code also supports the 
> "get all messages since t" query.
> 
> For the "get all messages since t" query, the parameter t should be the unix 
> timestamp in seconds, and the parameter n should be zero: curl -X GET 
> "http://localhost:8081/?cmd=jmsg&n=0&t=1473437918".
> 
> Pretty useful!  Perhaps this should be added to the AJAX documentation?

The "jmsg" methods are obsolete - please use the JSON-RPC method "cm_msg_retrieve" as shown in resources/example.html. It takes all the same parameters as the midas.h 
cm_msg_retrieve() function, see the snipped from example.html below.

To see the full list of JSON-RPC methods, go to the "help" page and press the button for "json-rpc schema in text table format".

The entry for "cm_msg_retrieve" has this:

------------------------------------------------------------------------------------
cm_msg_retrieve?      | Retrieve midas messages using cm_msg_retrieve2()
                      | ------------------------------------------------------------
                      | params   | facility?           | string         | message facility, default is "midas"
                      |          | min_messages?       | integer        | get at least this many messages, default is 1
                      |          | time?               | number         | start from given timestamp, value 0 means give me newest messages, default is 0
                      | ------------------------------------------------------------
                      | result   | num_messages        | integer        | number of messages returned
                      |          | messages            | string         | messages separated by \n
                      |          | status              | integer        | return status of cm_msg_retrieve2()
------------------------------------------------------------------------------------

Snippet from resources/example.html: (to add "time" parameter, put "time":12345 next to "min_messages").

<input type=button value='Get last 10 midas messages'
          onClick='mjsonrpc_call("cm_msg_retrieve", { "min_messages": 10 })
                   .then(function(rpc) {
                   document.getElementById("cm_msg_retrieve_num_messages").innerHTML = JSON.stringify(rpc.result.num_messages);
                   document.getElementById("cm_msg_retrieve_messages").innerHTML = JSON.stringify(rpc.result.messages);
                   //mjsonrpc_debug_alert(rpc);
                   })
                   .catch(function(error) {
                   mjsonrpc_error_alert(error);
                   });'></input>
Entry  13 Jun 2016, Konstantin Olchanski, Info, mongoose v6.4 is ready for use 
latest version of mongoose web server library (v6.4) is now implemented in midas. To try it out, edit 
the Makefile, comment-out USE_MONGOOSE4, uncomment USE_MONGOOSE6, make clean, 
make.

After some more testing mongoose v6 will be made the default. (if you see problems, please report 
them here).

Main user-visible change is implementation of pipelined http requests, where the same socket 
connection is reused for many requests (instead of opening a new connection for each request). 
This is supposed to significantly speed up things like ajax requests over https (ssl handshake is 
done only once). (As a buglet, some midas web pages do not generated the "ContentLength" 
header, and force connection reset).

Special features: (implemented in mhttpd.cxx)

- https support (same as mongoose v4)
- https score A- at SSLlabs (if ignore whining about self-signed certificate)
- CORS support (same as v4) (cross-origin AJAX requests - web pages loaded from some other 
web server can make requests into midas)
- password protection (same as v4, uses http digest authentication)
- http-to-https redirect (same as v4)
- setuid-root mode for binding to port 80 (special request from PSI).

K.O.
    Reply  13 Sep 2016, Konstantin Olchanski, Info, mongoose v6.4 is ready for use 
> latest version of mongoose web server library (v6.4) is now implemented in midas.

A number of bugs were found in the mongoose v6 implementation of HTTP digest authentication:

- unusual URL in the form "https://blah:8443/?" (notice trailing "?") were rejected. These URLs are sometimes generated by 
MIDAS.
- URLs longer than 200 bytes were rejected
- a check for matching URIs between the HTTP request and in digest authentication was missing (required by specs)

If you are using mhttpd with mongoose v6 https, please update mhttpd.cxx to the latest version.

We continue to recommend that mhttpd be used behind a proper HTTPS proxy with password protection (i.e. apache httpd).

mongoose v4 does not seem to have the same bugs, old server does not support https so does not have these bugs.

K.O.
       Reply  26 Sep 2016, Wes Gohn, Info, mongoose v6.4 is ready for use 
Since updating to the most recent midas commit, we get the following error if we try running mhttpd without su privileges: 

>mhttpd -e CR --http 8081
mhttpd is running in setuid-root mode.
mhttpd is listening on port 80
Mongoose version 4 cannot listen to port 80 in setuid mode. Please use mongoose version 6. Sorry, bye!
[mhttpd,ERROR] [midas.c:1960:,ERROR] cm_disconnect_experiment not called at end of program

It works if we run it as root, but that creates other problems. Is there a flag to turn off setuid-root mode? Or some other fix?

Thanks,
Wes
          Reply  26 Sep 2016, Konstantin Olchanski, Info, mongoose v6.4 is ready for use 
> Since updating to the most recent midas commit, we get the following error if we try running mhttpd without su privileges: 
> 
> >mhttpd -e CR --http 8081
> mhttpd is running in setuid-root mode.
> mhttpd is listening on port 80
> Mongoose version 4 cannot listen to port 80 in setuid mode. Please use mongoose version 6. Sorry, bye!
> [mhttpd,ERROR] [midas.c:1960:,ERROR] cm_disconnect_experiment not called at end of program
> 
> It works if we run it as root, but that creates other problems. Is there a flag to turn off setuid-root mode? Or some other fix?
> 


From these messages, it looks like you really are using the setuid-root mode. And indeed it is not usable with the mongoose version 4 implementation in MIDAS.

I can suggest several fixes:

1) the setuid-root mode was only ever intended for use at PSI because of peculiar network configuration of the PSI corporate firewall. It is not intended for general 
use.
1a) I as an author of MIDAS recommend against using the setuid-root mode and against installing mhttpd as setuid-root because it is not secure. (normally you 
would run mhttpd behind an apache https proxy providing https encryption and password protection).
1b) if you follow the midas installation instructions at https://midas.triumf.a you will see that we do not login as root and run "make install" to install mhttpd as 
setuid-root.
1c) if you follow these instructions, or if you run mhttpd from the midas build directory ($MIDASSYS/linux/bin/mhttpd), the setuid-root mode will not activate and 
everything will work ok.

2) you can run in the "old server" mode, but this more does not implement the JSON-RPC methods, so the "programs" and "alarms" pages will not work.
3) you can build mhttpd with the mongoose version 6 implementation, it will work even with the setuid-root mode. To do this, edit the Makefile, comment-out 
"USE_MONGOOSE4=1" and uncomment "USE_MONGOOSE6=1", then make clean, make.

K.O.
Entry  10 Mar 2016, Thomas Lindner, Info, New rootana forum | rootana web display tools 
We have started a new elog for discussions of the ROOTANA MIDAS analyzer package
[1], which is used at TRIUMF and elsewhere for quick displays of MIDAS data. 
The forum is available here

https://midas.triumf.ca/elog/Rootana

I would note that we have recently finished implementing a system in rootana for
easy web displays of MIDAS data, using ROOT's THttpServer to post histograms. 
Details on this new scheme are here

https://midas.triumf.ca/elog/Rootana/1

and

https://midas.triumf.ca/MidasWiki/index.php/Rootana_javascript_displays

Please sign up for the forum if you are interested in getting ROOTANA-related
discussions.

Thomas

[1] https://midas.triumf.ca/MidasWiki/index.php/ROOTANA
    Reply  16 Sep 2016, Konstantin Olchanski, Info, New rootana forum | rootana web display tools 
> We have started a new elog for discussions of the ROOTANA MIDAS analyzer package

Posting there is almost like talking to oneself - barely anybody is subscribed, not even me.

Hence this reminder.

If you use ROOTANA, click the "config" link, then click the "rootana" checkbutton, then "save".

K.O.
Entry  08 Aug 2016, Konstantin Olchanski, Release, Merged - new pure html web pages: programs and alarms. 
The code for the new pure html and javascript web pages was merged into main midas.

In this release, the "programs" and "alarms" pages are implemented as html files, see 
resources/programs.html and alarms.html.

Eventually we hope to implement all midas web pages in html, so this is just a start.

If you see problems with the new html code, you can revert to the old mhttpd-generated web 
pages by removing the files programs.html and alarms.html.

The new code for starting and stopping runs (start.html and transition.html) is also merged, but not 
yet enabled, pending a few more tests.

K.O.
Entry  13 Jun 2016, Konstantin Olchanski, Bug Fix, example ssl certificate removed 
I removed the example ssl certificate from the midas git repository (ssl_cert.pem). Now every midas 
installation must generate their own certificate - because to have any security at all each encryption 
private key has to be unique (and it has to be secret).

The command for generating a self-signed certificate is printed by mhttpd on startup:

openssl req -new -nodes -newkey rsa:2048 -sha256 -out ssl_cert.csr -keyout ssl_cert.key; openssl 
x509 -req -days 365 -sha256 -in ssl_cert.csr -signkey ssl_cert.key -out ssl_cert.pem; cat 
ssl_cert.key >> ssl_cert.pem

K.O.
Entry  13 Jun 2016, Konstantin Olchanski, Info, running mhttpd on port 443 
mhttpd running as non-root cannot bind to standard https port 443. By default, mhttpd uses port 
8443 and it works just fine, but some applications such as the SSLlabs https tester insist on using 
port 443.

To connect mhttpd with port 443, I use the tcpproxy package from
git://git.spreadspace.org/tcpproxy.git

./tcpproxy -D -U -p 443 -r localhost4 -o 8443

(you can run this from rc.local)

(to remember, for best security one should run mhttpd behind an industry-standard https proxy)

K.O.
Entry  11 May 2016, Thomas Lindner, Info, MacOS 10.11 (El Capitan) openssl compilation errors 
I recently upgraded my macbook to MacOS 10.11.  The compilation of MIDAS failed after the upgrade, 
complaining about  

gcc  -c -g -O2 -Wall <snip> src/mongoose.c
src/mongoose.c:322:10: fatal error: 'openssl/ssl.h' file not found

It seems that MacOS has now fully removed openssl header files (they were deprecated for a while).  There 
seems to be some notes on that here

http://lists.apple.com/archives/macnetworkprog/2015/Jun/msg00025.html

Konstantin suggested installing open-source builds of openssl using MacPorts.  I did that and MIDAS 
compiled fine.  I documented the procedure here:

https://midas.triumf.ca/MidasWiki/index.php/Installation/Compilation_problems#MacOS_10.11_.28El_Capitan.2
9_openssl_errors
    Reply  12 May 2016, Stefan Ritt, Info, MacOS 10.11 (El Capitan) openssl compilation errors 
> I recently upgraded my macbook to MacOS 10.11.  The compilation of MIDAS failed after the upgrade, 
> complaining about  
> 
> gcc  -c -g -O2 -Wall <snip> src/mongoose.c
> src/mongoose.c:322:10: fatal error: 'openssl/ssl.h' file not found
> 
> It seems that MacOS has now fully removed openssl header files (they were deprecated for a while).  There 
> seems to be some notes on that here
> 
> http://lists.apple.com/archives/macnetworkprog/2015/Jun/msg00025.html
> 
> Konstantin suggested installing open-source builds of openssl using MacPorts.  I did that and MIDAS 
> compiled fine.  I documented the procedure here:
> 
> https://midas.triumf.ca/MidasWiki/index.php/Installation/Compilation_problems#MacOS_10.11_.28El_Capitan.2
> 9_openssl_errors

The MIDAS Wiki page points to https://guide.macports.org/  which covers OSX up to 10.9. Installers for 10.10 and the current 10.11 
(El Captain) can be found here: https://www.macports.org/install.php

Stefan
    Reply  17 May 2016, Konstantin Olchanski, Info, openssl situation, MacOS 10.11 (El Capitan) openssl compilation errors 
> I recently upgraded my macbook to MacOS 10.11. 
> [ and midas would not compile ]
> It seems that MacOS has now fully removed openssl ...

My read of tea leaves - the macos version of openssl was so old it was almost useless, did not support any of the modern HTTPS 
features. So to use mhttpd with https you pretty much had to install openssl from macports anyway. For macos 10.11 maybe they 
looked at upgrading to newer version, but since the openssl kerfuffle last year, there is several forks of openssl (the OpenBSD fork 
named libressl is the best, IMO), so rather than picking and choosing, they deleted the whole thing.

Now back to MIDAS.

We use the mongoose web server module and I have expected by now for them to make a move on improving HTTPS support, but no 
move happened.

Right now mongoose support OpenSSL only (I would expect the OpenBSD LibreSSL fork to work to of the box, too). Other then that, 
they have:
a) their own mickey-mouse https library (krypton) which does not support any modern cryptography (RC4 only - when RC4 is known to 
be useless).
b) an adapter library (polar) for interfacing with PolarSSL (mbedtls)

At this point I would rather abandon the implicit dependency on the system-provided openssl and have an explicit dependancy on a 
modern https crypto library.

Option (b) would work for us - 
1) add "git clone mbedtls; cd mbedtls; make" to midas build instructions
2) add polarssl_compat.c to midas git (from cessanta/polar repo)
3) retest mhttpd against ssllabs https scanner, retest against all web browsers.

The downside of this route is loss of automatic nightly updates to the https crypto library (for better or for worse).

K.O.

P.S. Because on MacOS use of openssl from macports is pretty much required, it should be moved from the "tricks" page to the 
standard midas installation instructions ("install required packages").
Entry  22 Apr 2016, Wes Gohn, Bug Report, Calling external script from sequencer 
Can the MIDAS Sequencer call an external script? It seems that it should be able to. I have a simple 
test script to do so. It claims to execute, but the bash script never appears to be executed. Any 
suggestions?

1 COMMENT "This is a MSL test file"
  2 RUNDESCRIPTION "Test run"
  3 
  4 LOOP setting, 1,2, 3
  5      SCRIPT test_wheel.sh ,$setting 
  6      TRANSITION START
  7      WAIT Seconds 10
  8      TRANSITION STOP
  9 ENDLOOP

I've also tried using an xml script with <Script params="1">test_wheel.sh</Script>, but with the same 
result.

Thanks!
    Reply  22 Apr 2016, Wes Gohn, Bug Report, Calling external script from sequencer 
Nevermind. I just had to give it a path to my script. Now it's fine. 

> Can the MIDAS Sequencer call an external script? It seems that it should be able to. I have a simple 
> test script to do so. It claims to execute, but the bash script never appears to be executed. Any 
> suggestions?
> 
> 1 COMMENT "This is a MSL test file"
>   2 RUNDESCRIPTION "Test run"
>   3 
>   4 LOOP setting, 1,2, 3
>   5      SCRIPT test_wheel.sh ,$setting 
>   6      TRANSITION START
>   7      WAIT Seconds 10
>   8      TRANSITION STOP
>   9 ENDLOOP
> 
> I've also tried using an xml script with <Script params="1">test_wheel.sh</Script>, but with the same 
> result.
> 
> Thanks!
Entry  22 Mar 2016, Konstantin Olchanski, Info, emacs web-mode.el 
For those who use emacs to edit web pages - the built-in CSS and Javascript modes seem to work 
just fine for editing files.css and files.js, but the built-in html modes fall flat on modern web pages
which contain a mix of html, javascript inside <script> tags and javascript inside button "onclick" 
attributes.

So I looked at several emacs "html5 modes" and web-mode.el works well for me - html is indented 
correctly (default indent level is easy to change), javascript inside <script> tags is indented 
correctly (default indent level is easy to change), javascript inside "onclick" attributes has to be 
indented manually.

web-mode code repository and instructions are here, the author is very responsive and fixed my 
one request (permit manual intentation of javascript inside html attributes):
https://github.com/fxbois/web-mode

I now edit the html files in the MIDAS repository using these emacs settings:

8s-macbook-pro:web-mode 8ss$ more ~/.emacs
(setq-default indent-tabs-mode nil)
(setq-default tab-width 3)
(add-to-list 'load-path "~/git/web-mode")
(require 'web-mode)
(add-to-list 'auto-mode-alist '("\\.html\\'" . web-mode))
(setq web-mode-markup-indent-offset 2)
(setq web-mode-css-indent-offset 2)
(setq web-mode-code-indent-offset 3)
(setq web-mode-script-padding 0)
(setq web-mode-attr-indent-offset 2)
8s-macbook-pro:web-mode 8ss$ 

K.O.
Entry  18 Mar 2016, William Page, Bug Report, incomplete copy using odbedit copy 
Hi,

Attempting to copy a subtree to a new location in the ODB using odbedit with "copy <src> <dest>" is 
occasionally not copying the entire <src> subtree.

I am experiencing this issue consistently when trying to copy subtrees from the "/Equipment" ODB tree to 
a new location.  The first 2-3 variables/directories of the <src> subtree will be copied to <dest> but the 
full subtree will not be copied over.
    Reply  22 Mar 2016, Stefan Ritt, Bug Report, incomplete copy using odbedit copy 
> Hi,
> 
> Attempting to copy a subtree to a new location in the ODB using odbedit with "copy <src> <dest>" is 
> occasionally not copying the entire <src> subtree.
> 
> I am experiencing this issue consistently when trying to copy subtrees from the "/Equipment" ODB tree to 
> a new location.  The first 2-3 variables/directories of the <src> subtree will be copied to <dest> but the 
> full subtree will not be copied over.

I just tried myself and could successfully copy of even large trees in the /Equipment subtree. Need to reproduce the problem to fix 
it. Maybe close-to-full ODB?

Stefan
Entry  09 Mar 2016, Konstantin Olchanski, Info, /Experiment/Edit on start/Edit Run number 
The MIDAS documentation here:
  https://midas.triumf.ca/MidasWiki/index.php/Edit-on-start_Parameters
is missing informaiton about this ODB entry:
  /Experiment/Edit on start/Edit Run number (TID_BOOL)

This is what it does in mhttpd:
a) if it exists and is of type TID_BOOL and set to "n", run number is not editable
b) "Edit run number" itself is hidden, will not show up on the web page

This is what it does in odbedit:
a) it is hidden, will not show up in the list of run parameters
b) it's value has no effect, run number is always editable.

K.O.
Entry  22 Feb 2016, ZiyiGuo, Forum, Problem with BLTRead 
Dear all,

I'm using MIDAS system and CAEN V1721 to digitize the waveform from photomultipliers ( 
and the link bridge to PC is V2718 ). I use BLTRead to read data of the digitizer, but 
I found that if the event counting rate is high ( about 100KB/s ), the communication 
of V1721 and PC would be suspended randomly, and I get an error code of -2. Could you 
give me some suggestion? Thanks a lot.
    Reply  23 Feb 2016, Pierre-Andre Amaudruz, Forum, Problem with BLTRead 
> Dear all,
> 
> I'm using MIDAS system and CAEN V1721 to digitize the waveform from photomultipliers ( 
> and the link bridge to PC is V2718 ). I use BLTRead to read data of the digitizer, but 
> I found that if the event counting rate is high ( about 100KB/s ), the communication 
> of V1721 and PC would be suspended randomly, and I get an error code of -2. Could you 
> give me some suggestion? Thanks a lot.

Hi, 

Can you provide the BLTread call fragment code and the PC /var/log/messages at the time of 
the hang up.
What is needed to restart the daq?

PAA
       Reply  02 Mar 2016, ZiyiGuo, Forum, Problem with BLTRead 
> > Dear all,
> >
> > I'm using MIDAS system and CAEN V1721 to digitize the waveform from photomultipliers (
> > and the link bridge to PC is V2718 ). I use BLTRead to read data of the digitizer, but
> > I found that if the event counting rate is high ( about 100KB/s ), the communication
> > of V1721 and PC would be suspended randomly, and I get an error code of -2. Could you
> > give me some suggestion? Thanks a lot.
>
> Hi,
>
> Can you provide the BLTread call fragment code and the PC /var/log/messages at the time of
> the hang up.
> What is needed to restart the daq?
>
> PAA

Hi Pierre-Andre,

Sorry for my late reply, because the data acquisition system now is running other experiment.
Here is my code. Is there something wrong? Thanks!




/* Read FADC data */
int NByteOfOneEvent = HeadSize + SampSize * NChannel;
int NDWordOfOneEvent = NByteOfOneEvent/4;


/* 1. Create FADC bank. One bank for one branch of a tree or one array branch with length. */
bk_create(pevent, "FADC", TID_DWORD, (void**)&pdata);

uint32_t size_remaining_dwords;
int dwords_read;

/* 2. Read out the event and assign them to pdata (bank buffer) */
//read size of event to be read
sCAEN = CAENComm_Read32(hFADC[card], V1721_EVENT_SIZE, &size_remaining_dwords);

if( size_remaining_dwords < NDWordOfOneEvent ) {
printf("\r\nSize of available data is less than the required size of one event.\r\n");
}

/* Read */
DWORD *pFadcData;
sCAEN = CAENComm_BLTRead(hFADC[card], V1721_EVENT_READOUT_BUFFER, pdata, NDWordOfOneEvent, &dwords_read);

// These code in "if" is for restart communication and save the time information if the communication was suspended

if(sCAEN != 0)
{
//printf("sCAEN =%d \n", sCAEN);
time_t t = time(0);
char tmp[64];
strftime(tmp,sizeof(tmp),"%Y/%m/%d %X %Z",localtime(&t));
fprintf(logfile,tmp);
fprintf(logfile,"\n Here met communication error \n");
printf(" Here met communication error \n");

//re-establish communication
sCAEN = CAENComm_CloseDevice(hFADC[card]);
fprintf(logfile,"sCAEN =%d, device closed **********\n", sCAEN);

ss_sleep(2000);

sCAEN = CAENComm_OpenDevice(CAENComm_PCIE_OpticalLink, l, d, FADCBA[card], &(hFADC[card]));

if (sCAEN == CAENComm_Success) {
fprintf(logfile,"re-establish communication, handle:%d, sCAEN=%d \n", hFADC[card], sCAEN);
}
else {
sCAEN = CAENComm_OpenDevice(CAENComm_PCIE_OpticalLink, l, d, FADCBA[card], &(hFADC[card]));
fprintf(logfile,"try open device again sCAEN= %d\n", sCAEN); }

//pause ongoing reading process
sCAEN = ov1721_AcqCtl(hFADC[card], V1721_RUN_STOP);
sCAEN = CAENComm_Read32(hFADC[card], V1721_EVENT_STORED, &eStored);

//discard FADC buffer
sCAEN = CAENComm_Write32(hFADC[card], V1721_SW_CLEAR, 0);
fprintf(logfile," number of %d events discarded \n\n", eStored);
sCAEN = ov1721_AcqCtl(hFADC[card], V1721_RUN_START);
}

//dwords_read: Number of the words that actually read from the device.
if( dwords_read != NDWordOfOneEvent ) {
printf("\r\nSize of data read out doesn't equal to the required size of one event. \r\n");
}

EvtCounterFadc[card] = *(pdata+2) & 0x00ffffff;

/* 3. Update bank pointer position */
pdata += dwords_read;

/* 4. Finish one bank */
bk_close(pevent, pdata);
Entry  10 Dec 2015, Amy Roberts, Suggestion, script command limited to 256 characters; remove limit? 
Both the /Script and /CustomScript trees in the ODB allow users to trigger a 
script via Midas - which silently truncates command strings longer than 
256 characters.

I'd prefer that Midas place no limit on string length.  Failing that, it would be
helpful to have character limits called out in the documentation 
(https://midas.triumf.ca/MidasWiki/index.php//Script_ODB_tree#.3Cscript-name.3E_key_or_subtree,
https://midas.triumf.ca/MidasWiki/index.php//Customscript_ODB_tree).

As far as I can tell, odb.c allows arbitrarily large strings in the ODB data.  
(Although key *names* are restricted to 256 characters.)  I've submitted one 
possible version of an arbitrary-length exec_script() as a pull request 
(https://bitbucket.org/tmidas/midas/pull-requests/).

Am I misunderstanding any critical pieces?  Does Midas intentionally treat 
strings in the ODB as limited to 256 characters?
    Reply  28 Jan 2016, Konstantin Olchanski, Suggestion, script command limited to 256 characters; remove limit? 
Thank you for reporting this problem:

a) ODB key *names* are restricted to 31 characters (32 bytes, last byte is a NUL), not 256 characters.
b) ODB string length is unlimited (32-bit length field)
c) ODB C API "db_get_value" & co require fixed length buffer and most users of this API provide a 256-byte fixed buffer for strings, some of them also do not 
check the status code, resulting in silent truncation. (I think the ODB functions themselves report truncation to midas.log, so not completely silent).

We try to fix this where we must - but it is cumbersome with the current ODB API - as in your fix on has to:
- get the ODB key, extract size
- allocate buffer
- call db_get_value() & co
- use the data
- remember to free the buffer on each and every return path

The first three steps could become one if we had an ODB "get_data" function that automatically allocated the data buffer.

But the main source of bugs will be the last step - remember to free the buffer, always.

P.S.

We are not alone in pondering how to do this best. If you want to see it "done right",
read the fresh-off-the-presses book "Go Programming Language" by Alan Donovan and Brian Kernighan,
http://www.gopl.io/

Brian Kernighan is the "K" in K&R "C programming language", still around and kicking, now at Google.
Sadly the "R" passed away in 2011 - http://www.nytimes.com/2011/10/14/technology/dennis-ritchie-programming-trailblazer-dies-at-70.html

K.O.

> Both the /Script and /CustomScript trees in the ODB allow users to trigger a 
> script via Midas - which silently truncates command strings longer than 
> 256 characters.
> 
> I'd prefer that Midas place no limit on string length.  Failing that, it would be
> helpful to have character limits called out in the documentation 
> (https://midas.triumf.ca/MidasWiki/index.php//Script_ODB_tree#.3Cscript-name.3E_key_or_subtree,
> https://midas.triumf.ca/MidasWiki/index.php//Customscript_ODB_tree).
> 
> As far as I can tell, odb.c allows arbitrarily large strings in the ODB data.  
> (Although key *names* are restricted to 256 characters.)  I've submitted one 
> possible version of an arbitrary-length exec_script() as a pull request 
> (https://bitbucket.org/tmidas/midas/pull-requests/).
> 
> Am I misunderstanding any critical pieces?  Does Midas intentionally treat 
> strings in the ODB as limited to 256 characters?
       Reply  28 Jan 2016, Amy Roberts, Suggestion, script command limited to 256 characters; remove limit? 
Using low-level memory allocation routines in higher-level programs like mhttpd makes me nervous.

We could use vector arrays to allow variable-sized allocation, and use the data() member function to access the char* needed for functions like strlcat,
db_get_data, and db_sprintf.

This conforms to the c++ standard, but doesn't require explicit freeing by the user - at least, not when you're allocating std::vector<char>.

Amy

> Thank you for reporting this problem:
> 
> a) ODB key *names* are restricted to 31 characters (32 bytes, last byte is a NUL), not 256 characters.
> b) ODB string length is unlimited (32-bit length field)
> c) ODB C API "db_get_value" & co require fixed length buffer and most users of this API provide a 256-byte fixed buffer for strings, some of them also do not 
> check the status code, resulting in silent truncation. (I think the ODB functions themselves report truncation to midas.log, so not completely silent).
> 
> We try to fix this where we must - but it is cumbersome with the current ODB API - as in your fix on has to:
> - get the ODB key, extract size
> - allocate buffer
> - call db_get_value() & co
> - use the data
> - remember to free the buffer on each and every return path
> 
> The first three steps could become one if we had an ODB "get_data" function that automatically allocated the data buffer.
> 
> But the main source of bugs will be the last step - remember to free the buffer, always.
> 
> P.S.
> 
> We are not alone in pondering how to do this best. If you want to see it "done right",
> read the fresh-off-the-presses book "Go Programming Language" by Alan Donovan and Brian Kernighan,
> http://www.gopl.io/
> 
> Brian Kernighan is the "K" in K&R "C programming language", still around and kicking, now at Google.
> Sadly the "R" passed away in 2011 - http://www.nytimes.com/2011/10/14/technology/dennis-ritchie-programming-trailblazer-dies-at-70.html
> 
> K.O.
> 
> > Both the /Script and /CustomScript trees in the ODB allow users to trigger a 
> > script via Midas - which silently truncates command strings longer than 
> > 256 characters.
> > 
> > I'd prefer that Midas place no limit on string length.  Failing that, it would be
> > helpful to have character limits called out in the documentation 
> > (https://midas.triumf.ca/MidasWiki/index.php//Script_ODB_tree#.3Cscript-name.3E_key_or_subtree,
> > https://midas.triumf.ca/MidasWiki/index.php//Customscript_ODB_tree).
> > 
> > As far as I can tell, odb.c allows arbitrarily large strings in the ODB data.  
> > (Although key *names* are restricted to 256 characters.)  I've submitted one 
> > possible version of an arbitrary-length exec_script() as a pull request 
> > (https://bitbucket.org/tmidas/midas/pull-requests/).
> > 
> > Am I misunderstanding any critical pieces?  Does Midas intentionally treat 
> > strings in the ODB as limited to 256 characters?
          Reply  26 Feb 2016, Konstantin Olchanski, Suggestion, script command limited to 256 characters; remove limit? 
> Using low-level memory allocation routines in higher-level programs like mhttpd makes me nervous.

It should not, people have used malloc() for decades now without much injury to themselves. (Thomas corrects me: some people had big injury to their pride, me included).

> We could use vector arrays to allow variable-sized allocation, and use the data() member function to access the char* needed for functions like strlcat,
> db_get_data, and db_sprintf.

I thought auto_ptr was the correct tool to allocate "I just need a few bytes for a few minutes" arrays, but there is some discrepancy
between delete and delete[] (with brackets) and auto_ptr p(new char[i]) is verboten (even though it compiles just fine).

I ended up writing a custom replacement for auto_ptr called auto_string - now in mhttpd.cxx available for use in other places like this.

Still I think a db_get_data() that returns allocated memory is the correct solution. But this memory still needs to be released and lacking auto_ptr it opens the door for memory leaks.

> This conforms to the c++ standard, but doesn't require explicit freeing by the user - at least, not when you're allocating std::vector<char>

I do not think std::vector<char> can be cast into "char*" and used as replacement of "char str[100]" or "char* str = malloc(i);"

In other new, the limit on the command length is now removed.

K.O.

> 
> Amy
> 
> > Thank you for reporting this problem:
> > 
> > a) ODB key *names* are restricted to 31 characters (32 bytes, last byte is a NUL), not 256 characters.
> > b) ODB string length is unlimited (32-bit length field)
> > c) ODB C API "db_get_value" & co require fixed length buffer and most users of this API provide a 256-byte fixed buffer for strings, some of them also do not 
> > check the status code, resulting in silent truncation. (I think the ODB functions themselves report truncation to midas.log, so not completely silent).
> > 
> > We try to fix this where we must - but it is cumbersome with the current ODB API - as in your fix on has to:
> > - get the ODB key, extract size
> > - allocate buffer
> > - call db_get_value() & co
> > - use the data
> > - remember to free the buffer on each and every return path
> > 
> > The first three steps could become one if we had an ODB "get_data" function that automatically allocated the data buffer.
> > 
> > But the main source of bugs will be the last step - remember to free the buffer, always.
> > 
> > P.S.
> > 
> > We are not alone in pondering how to do this best. If you want to see it "done right",
> > read the fresh-off-the-presses book "Go Programming Language" by Alan Donovan and Brian Kernighan,
> > http://www.gopl.io/
> > 
> > Brian Kernighan is the "K" in K&R "C programming language", still around and kicking, now at Google.
> > Sadly the "R" passed away in 2011 - http://www.nytimes.com/2011/10/14/technology/dennis-ritchie-programming-trailblazer-dies-at-70.html
> > 
> > K.O.
> > 
> > > Both the /Script and /CustomScript trees in the ODB allow users to trigger a 
> > > script via Midas - which silently truncates command strings longer than 
> > > 256 characters.
> > > 
> > > I'd prefer that Midas place no limit on string length.  Failing that, it would be
> > > helpful to have character limits called out in the documentation 
> > > (https://midas.triumf.ca/MidasWiki/index.php//Script_ODB_tree#.3Cscript-name.3E_key_or_subtree,
> > > https://midas.triumf.ca/MidasWiki/index.php//Customscript_ODB_tree).
> > > 
> > > As far as I can tell, odb.c allows arbitrarily large strings in the ODB data.  
> > > (Although key *names* are restricted to 256 characters.)  I've submitted one 
> > > possible version of an arbitrary-length exec_script() as a pull request 
> > > (https://bitbucket.org/tmidas/midas/pull-requests/).
> > > 
> > > Am I misunderstanding any critical pieces?  Does Midas intentionally treat 
> > > strings in the ODB as limited to 256 characters?
Entry  05 Feb 2016, Thomas Lindner, Suggestion, reducing sleep time in mhttpd main loop (for sequencer) 
There were some complaints that the MIDAS sequencer was slow.  Specifically, the
complaint was that even lines in the sequence that didn't do any (like COMMENT
commands) tooks > 100ms to execute.  These slow sequencer steps could be a
little annoying if a script had to change a large number of ODB variables before
starting.

I tested this a little using a trivial sequence; note that I did all tests using
mhttpd with mongoose enabled on a newer macbook pro.  I found that with the
mongoose server each line in a sequencer script was taking ~100ms.  This is
consistent with the loop in the main thread, which is only doing a cm_yield and
a sleep:

   while (!_abort) {
      status = ss_mutex_wait_for(request_mutex, 0);
      status = cm_yield(0);
      if (status == RPC_SHUTDOWN)
         break;
      sequencer();
      status = ss_mutex_release(request_mutex);
      ss_sleep(100);
   }

I tested reducing the sleep to 20ms.  As expected, this made the sequencer more
zippy, able to execute ~50 commands per second.

I tried to think what would be downsides to making this change.  I think that
the main web communication should not be affected, because that communication is
all handled by the separate mongoose thread.

I checked how much extra CPU was used if the sleep was reduced from 100ms to
20ms.  I found that when a sequence was not running the CPU increased from 0% to
0.2% with my change.  When a sequence was running the CPU increased from 0.8% to
4% with my change.  4% is a little high, though I'd say still reasonable.  I
found that most of the CPU usage was occuring because every call to
'sequencer()' resulted in a call to db_set_record("/Sequencer/State"...).  I
guess that making that call 50 times causes the somewhat heavy CPU usage.

I would argue that it would still be worth making that change, so that the
sequencer can be more zippy.
    Reply  05 Feb 2016, Thomas Lindner, Suggestion, reducing sleep time in mhttpd main loop (for sequencer) 
> There were some complaints that the MIDAS sequencer was slow.  Specifically, the
> complaint was that even lines in the sequence that didn't do any (like COMMENT
> commands) tooks > 100ms to execute.  These slow sequencer steps could be a
> little annoying if a script had to change a large number of ODB variables before
> starting.
> ...
> I checked how much extra CPU was used if the sleep was reduced from 100ms to
> 20ms.  I found that when a sequence was not running the CPU increased from 0% to
> 0.2% with my change.  When a sequence was running the CPU increased from 0.8% to
> 4% with my change.  4% is a little high, though I'd say still reasonable.  I
> found that most of the CPU usage was occuring because every call to
> 'sequencer()' resulted in a call to db_set_record("/Sequencer/State"...).  I
> guess that making that call 50 times causes the somewhat heavy CPU usage.

One additional point: I think that it would be reasonably simple to reduce this CPU
usage even while a sequence was going on.  I would guess that for many sequences a
lot of time was spent in a 'WAIT SECONDS' command, since you would presumably want
to wait while data was being taken or conditions stabilizing.  I think that if you
are in a 'WAIT SECONDS' command that hasn't been satisfied then there probably isn't
any reason to do the db_set_record at the end of the sequencer() method.
    Reply  06 Feb 2016, Stefan Ritt, Suggestion, reducing sleep time in mhttpd main loop (for sequencer) 
> There were some complaints that the MIDAS sequencer was slow.  Specifically, the
> complaint was that even lines in the sequence that didn't do any (like COMMENT
> commands) tooks > 100ms to execute.  These slow sequencer steps could be a
> little annoying if a script had to change a large number of ODB variables before
> starting.
> 
> I tested this a little using a trivial sequence; note that I did all tests using
> mhttpd with mongoose enabled on a newer macbook pro.  I found that with the
> mongoose server each line in a sequencer script was taking ~100ms.  This is
> consistent with the loop in the main thread, which is only doing a cm_yield and
> a sleep:
> 
>    while (!_abort) {
>       status = ss_mutex_wait_for(request_mutex, 0);
>       status = cm_yield(0);
>       if (status == RPC_SHUTDOWN)
>          break;
>       sequencer();
>       status = ss_mutex_release(request_mutex);
>       ss_sleep(100);
>    }
> 
> I tested reducing the sleep to 20ms.  As expected, this made the sequencer more
> zippy, able to execute ~50 commands per second.
> 
> I tried to think what would be downsides to making this change.  I think that
> the main web communication should not be affected, because that communication is
> all handled by the separate mongoose thread.
> 
> I checked how much extra CPU was used if the sleep was reduced from 100ms to
> 20ms.  I found that when a sequence was not running the CPU increased from 0% to
> 0.2% with my change.  When a sequence was running the CPU increased from 0.8% to
> 4% with my change.  4% is a little high, though I'd say still reasonable.  I
> found that most of the CPU usage was occuring because every call to
> 'sequencer()' resulted in a call to db_set_record("/Sequencer/State"...).  I
> guess that making that call 50 times causes the somewhat heavy CPU usage.
> 
> I would argue that it would still be worth making that change, so that the
> sequencer can be more zippy.

The minimal time slice on most systems is 10 ms, and nothing prevents us from switching to
that. The original 100 ms was more for the fact that you can see the sequencer statements
executed one after the other (with the color bar). But this is more a "debugging" feature which 
we not really need. 

To do it "right" the sequencer would have to _return_ a sleep time. Like if it is in a wait loop (as
most of the time), the sleep time could be close to 1 second, to correctly update the wait
progress bar. If the sequencer executes ODB set statements, the wait time could be zero, so
thousands of statements can be executed in one second. The problem we will then have of course
that the sequencer will block the "request_mutex" almost always, which would prevent the
mongoose server from serving anything. So this should be carefully tested. It could be (on most OS)
that releasing the mutex by the main loop immediately switches to the mongoose thread, which would
make the web server still quite responsive, but I'm not sure about that. So as a first change making
the sleep time 10ms should be fine.

Stefan
       Reply  15 Feb 2016, Thomas Lindner, Suggestion, reducing sleep time in mhttpd main loop (for sequencer) 
> > I checked how much extra CPU was used if the sleep was reduced from 100ms to
> > 20ms.  I found that when a sequence was not running the CPU increased from 0% to
> > 0.2% with my change.  When a sequence was running the CPU increased from 0.8% to
> > 4% with my change.  4% is a little high, though I'd say still reasonable.  I
> > found that most of the CPU usage was occuring because every call to
> > 'sequencer()' resulted in a call to db_set_record("/Sequencer/State"...).  I
> > guess that making that call 50 times causes the somewhat heavy CPU usage.
> > 
> > I would argue that it would still be worth making that change, so that the
> > sequencer can be more zippy.
> 
> The minimal time slice on most systems is 10 ms, and nothing prevents us from switching to
> that. The original 100 ms was more for the fact that you can see the sequencer statements
> executed one after the other (with the color bar). But this is more a "debugging" feature which 
> we not really need. 

OK, I made this change; sleep is now 10ms on main thread.  Seems to work fine on SL6 and MacOS.

> To do it "right" the sequencer would have to _return_ a sleep time. Like if it is in a wait loop (as
> most of the time), the sleep time could be close to 1 second, to correctly update the wait
> progress bar. If the sequencer executes ODB set statements, the wait time could be zero, so
> thousands of statements can be executed in one second. The problem we will then have of course
> that the sequencer will block the "request_mutex" almost always, which would prevent the
> mongoose server from serving anything. So this should be carefully tested. It could be (on most OS)
> that releasing the mutex by the main loop immediately switches to the mongoose thread, which would
> make the web server still quite responsive, but I'm not sure about that. So as a first change making
> the sleep time 10ms should be fine.

Hmm, yeah, I'm not sure about how to handle reducing the wait time to zero after ODB set commands.

But it does seem like it would be straight-forward to increase the sleep time for waits; I'll look into
a clean way of doing that.
          Reply  15 Feb 2016, Stefan Ritt, Suggestion, reducing sleep time in mhttpd main loop (for sequencer) 
> Hmm, yeah, I'm not sure about how to handle reducing the wait time to zero after ODB set commands.
> 
> But it does seem like it would be straight-forward to increase the sleep time for waits; I'll look into
> a clean way of doing that.

Let's see how your 10 ms work in real life. If we need variable wait times, I can implement this for your without much effort.

Stefan
Entry  30 Nov 2015, Konstantin Olchanski, Release, Final MIDAS JSON-RPC API 
The final bits of the JSON-RPC API to MIDAS are committed. The API uses the Javascript Promise mechanism (supported on all 
supported platforms - MacOS, Windows, Linux Ubuntu, el5, el6, el7).

Simple example for pasting the current run number into an html element:

mjsonrpc_db_get_values(["/runinfo/run number"]).then(function(rpc) {
   document.getElementById("run_number").innerHTML = rpc.response.data[0];
}).catch(function(error) {
   mjsonrpc_error_alert(error);
});

The documentation for the JSON-RPC API, including special quirks in JSON encoding of ODB data is here:
https://midas.triumf.ca/MidasWiki/index.php/Mjsonrpc

Documentation (with examples) for the related Javascript functions in mhttpd.js is here (via Doxygen):
https://daq.triumf.ca/~daqweb/doc/midas-devel/html/group__mjsonrpc__js.html

Examples of using all mhttpd.js functions is in .../examples/javascript1/example.html

The experimental git branch feature/mhttpd_js implements the MIDAS "programs" page purely in html and javascript,
go there to see all this new JSON and RPC stuff in action. See .../resources/programs.html.

K.O.
    Reply  02 Dec 2015, Konstantin Olchanski, Release, Final MIDAS JSON-RPC API 
> The final bits of the JSON-RPC API to MIDAS are committed.

Here is example conversion of the function "generate midas message" from old-style AJAX to JSON-RPC:

before (mhttpd.cxx):

   /* process "jgenmsg" command */
   if (equal_ustring(getparam("cmd"), "jgenmsg")) {

      if (getparam("facility") && *getparam("facility"))
         strlcpy(facility, getparam("facility"), sizeof(facility));
      else
         strlcpy(facility, "midas", sizeof(facility));
      
      if (getparam("user") && *getparam("user"))
         strlcpy(user, getparam("user"), sizeof(user));
      else
         strlcpy(user, "javascript_commands", sizeof(user));
      
      if (getparam("type") && *getparam("type"))
         type = atoi(getparam("type"));
      else
         type = MT_INFO;

      if (getparam("msg") && *getparam("msg")) {
         cm_msg1(type, __FILE__, __LINE__, facility, user, "%s", getparam("msg"));
      }

      show_text_header();
      rsputs("Message successfully created\n");
      return;
   }

after: (mjsonrpc.cxx)

static MJsonNode* js_cm_msg1(const MJsonNode* params)
{
   if (!params) {
      MJSO *doc = MJSO::I();
      doc->D("Generate a midas message using cm_msg1()");
      doc->P("facility?", MJSON_STRING, "message facility, default is \"midas\"");
      doc->P("user?", MJSON_STRING, "message user, default is \"javascript_commands\"");
      doc->P("type?", MJSON_INT, "message type, MT_xxx from midas.h, default is MT_INFO");
      doc->P("message", MJSON_STRING, "message text");
      doc->R("status", MJSON_INT, "return status of cm_msg1()");
      return doc;
   }

   MJsonNode* error = NULL;

   const char* facility = mjsonrpc_get_param(params, "facility", &error)->GetString().c_str();
   const char* user = mjsonrpc_get_param(params, "user", &error)->GetString().c_str();
   int type = mjsonrpc_get_param(params, "type", &error)->GetInt();
   const char* message = mjsonrpc_get_param(params, "message", &error)->GetString().c_str(); if (error) return error;

   if (strlen(facility)<1)
      facility = "midas";
   if (strlen(user)<1)
      user = "javascript_commands";
   if (type == 0)
      type = MT_INFO;

   int status = cm_msg1(type, __FILE__, __LINE__, facility, user, "%s", message);

   return mjsonrpc_make_result("status", MJsonNode::MakeInt(status));
}

With the corresponding javascript-side stabs:

before:

function ODBGenerateMsg(type,facility,user,msg)
{
   var request = XMLHttpRequestGeneric();

   var url = ODBUrlBase + '?cmd=jgenmsg';
   url += '&type='+type;
   url += '&facility='+facility;
   url += '&user='+user;
   url += '&msg=' + encodeURIComponent(msg);
   request.open('GET', url, false);
   request.send(null);
   return request.responseText;
}

after:

function mjsonrpc_cm_msg(message, type, id) {
   /// \ingroup mjsonrpc_js
   /// Get values of ODB variables
   ///
   /// RPC method: "cm_msg1"
   ///
   /// \code
   /// mjsonrpc_cm_msg("this is a new message").then(function(rpc) {
   ///    var req    = rpc.request; // reference to the rpc request
   ///    var id     = rpc.id;      // rpc response id (should be same as req.id)
   ///    var status = rpc.result.status;  // return status of MIDAS cm_msg1()
   ///    ...
   /// }).catch(function(error) {
   ///    mjsonrpc_error_alert(error);
   /// });
   /// \endcode
   /// @param[in] message Text of midas message (string)
   /// @param[in] type optional message type, one of MT_xxx. Default is MT_INFO (integer)
   /// @param[in] id optional request id (see JSON-RPC specs) (object)
   /// @returns new Promise
   ///
   var req = new Object();
   req.message = message;
   if (type)
      req.type = type;
   return mjsonrpc_call("cm_msg1", req, id);
}

K.O
       Reply  28 Jan 2016, Konstantin Olchanski, Release, Final MIDAS JSON-RPC API 
> > The final bits of the JSON-RPC API to MIDAS are committed.

JSON-RPC methods are now provided for all old ODBxxx() javascript functions, except ODBGetMsg().

The currently present RPC methods are sufficient to write the MIDAS "programs" and "alarms" pages
purely in HTML+Javascript (see the git branch feature/mhttpd_js). These pages can be served i.e. by apache httpd
with midas mhttpd only required to service the RPC requests.

Please see .../examples/javascript1/example.html on how to use the new RPC methods.

K.O.

P.S. Note how many examples use the generic mjsonrpc_call() because I did not write the corresponding
javascript functions - I wore out the cut-and-paste button on my keyboard. All are welcome to contribute
the missing functions, post them here or email them to me, I will commit them to midas git.
Entry  05 Jan 2016, Tom Stuttard, Suggestion, 64 bit bank type 
I've seen that a similar question has been asked in 2011 but I'll ask again in 
case there are any updates. Is there any way to write 64-bit data words to MIDAS 
banks (other than breaking them up in to two 32-bit words, such as 2 DWORDs) 
currently? And if not, is there any plan to introduce this feature in the future?

Many thanks,
Tom
    Reply  05 Jan 2016, Konstantin Olchanski, Suggestion, 64 bit bank type 
> I've seen that a similar question has been asked in 2011 but I'll ask again in 
> case there are any updates. Is there any way to write 64-bit data words to MIDAS 
> banks (other than breaking them up in to two 32-bit words, such as 2 DWORDs) 
> currently? And if not, is there any plan to introduce this feature in the future?

There is no "breaking them up" as such, you can treat a midas bank as a char* array
and store arbitrary data inside. In this sense, "there is no need" for a special 64-bit bank type.

For endian-ness conversion (if such things still matter, big-endian PPC CPUs still exist), single 64-bit 
word converts the same as two 32-bit words, so here also "there is no need", once can use banks of 
DWORD with equal effect.

The above applies equally to 64-bit integers and 64-bit double-precision IEEE-754 floating point 
numbers.

But specifically for 64-bit values, such as float64, there is a big gotcha.

The MIDAS banks structure goes to great lengths to make sure each data type is correctly aligned,
and gets it exactly wrong for 64-bit quantities - all because the bank header is three 32-bit words.

bankhheader1
bh2
bh3
bankdata1 <--- misaligned
...
bankdataN
bh1
bh2
bh3
banddata1 <--- aligned
... etc

So we could introduce QWORD banks today, but inside the midas file, they will be misaligned defeating 
the only purpose of adding them.

I guess the misalignement could be cured by adding dummy words, dummy banks, dummy bank 
headers, etc.

I figure this problem dates all the way bank where alignement to 16-bits was just getting important. 
Today, in the VME word, I have to align things on 128-bit boundaries (for 2eSST 2x2 DWORD transfers).

So back to your question, what advantage do you see in using a QWORD bank instead of putting the 
same data in a DWORD bank?

K.O.
       Reply  19 Jan 2016, Tom Stuttard, Suggestion, 64 bit bank type 
> > I've seen that a similar question has been asked in 2011 but I'll ask again in 
> > case there are any updates. Is there any way to write 64-bit data words to MIDAS 
> > banks (other than breaking them up in to two 32-bit words, such as 2 DWORDs) 
> > currently? And if not, is there any plan to introduce this feature in the future?
> 
> There is no "breaking them up" as such, you can treat a midas bank as a char* array
> and store arbitrary data inside. In this sense, "there is no need" for a special 64-bit bank type.
> 
> For endian-ness conversion (if such things still matter, big-endian PPC CPUs still exist), single 64-bit 
> word converts the same as two 32-bit words, so here also "there is no need", once can use banks of 
> DWORD with equal effect.
> 
> The above applies equally to 64-bit integers and 64-bit double-precision IEEE-754 floating point 
> numbers.
> 
> But specifically for 64-bit values, such as float64, there is a big gotcha.
> 
> The MIDAS banks structure goes to great lengths to make sure each data type is correctly aligned,
> and gets it exactly wrong for 64-bit quantities - all because the bank header is three 32-bit words.
> 
> bankhheader1
> bh2
> bh3
> bankdata1 <--- misaligned
> ...
> bankdataN
> bh1
> bh2
> bh3
> banddata1 <--- aligned
> ... etc
> 
> So we could introduce QWORD banks today, but inside the midas file, they will be misaligned defeating 
> the only purpose of adding them.
> 
> I guess the misalignement could be cured by adding dummy words, dummy banks, dummy bank 
> headers, etc.
> 
> I figure this problem dates all the way bank where alignement to 16-bits was just getting important. 
> Today, in the VME word, I have to align things on 128-bit boundaries (for 2eSST 2x2 DWORD transfers).
> 
> So back to your question, what advantage do you see in using a QWORD bank instead of putting the 
> same data in a DWORD bank?
> 
> K.O.


Thanks very much for your reply. I have implemented your suggestion of treating the 64-bit array as a 32-bit 
array for the bank write/read and this solution is working for me.

Thanks again for your help.
Entry  10 Dec 2015, Stefan Ritt, Info, Small change in loading .odb files 
A small change in loading .odb files has been implemented. When you load an array from a .odb file, the indices in each line were not evaluated, only the complete array was loaded. In our experiment we need however to load only a few values, like some HV values for some channels but leaving the other values as they are. I changed slightly the code of db_paste() to correctly evaluate the index in each line of the .odb file. This way one can write for example following .odb file:

[/Equipment/HV/Variables]
Demand = FLOAT[256] :
[10] 100.1
[11] 100.2
[12] 100.3
[13] 100.4
[14] 100.5
[15] 100.6

then load it in odbedit via the "load" command, and then only change channels 10-15.

Stefan
Entry  27 Nov 2015, Konstantin Olchanski, Info, updated: note on midas history 
(update: resolve all FIXMEs, document the breakup of "structured banks")

This note documents the workings of the midas history.

There is 2 separate history sections: equipment history and links history.

* is equipment history enabled?

For each equipment, history is controlled by the value of /eq/xxx/common/period:

0 = history disabled
1 = history is enabled
>1 = history is enabled, throttled down

The throttling is implemented in log_history()/watch_history() by this algorithm:
the very first history event is recorded, then all changed to the data are ignored until
"period" seconds has elapsed. Then the next history event will be recorded, and following
changes will be ignored until "period" second elapses, and so forth. Period value "1" has
special meaning - there is no throttling, all history events are logged.

If equipment history is enabled, history events are created by parsing the content of /eq/xxx/variables.

* what is history events?

A "history event" is a history atomic unit of data. Associated with each history event is a timestamp (unix time),
a name (limited to NAME_LENGTH in the old history) and a list of history tags that describe the individual data
values inside the history event.

When making history plots in mhttpd, for each curve on the plot, one selects a history event (from the list
of currently active events, recently active events or the list of all events that ever existed), then from the list of tags
inside the history event one selects the particular variable that will be plotted.

In the old MIDAS history, all history events are written into one history file (.hst file + optional .def and .idx event definition and time index files
which can be/are regenerated automatically from the .hst file). History events are identified by 16-bit history event IDs, the persistent mapping
from history event names and the 16-bit history event IDs is stored in ODB /History/Events. In addition the list of all known history event tags is
stored in ODB /History/Tags. For per-equipment history, the 16-bit history event ID is the value of ODB "/eq/xxx/common/event id".

In the SQL history (MySQL, SQLITE, etc), each history event is an SQL table. The history event tags are the SQL table columns.

In the new FILE history, each history event is written into a separate file, tag definition are recorded in text formal in the file header, history event
data is appended to the file in binary format (fixed record size). If the history event definition is changed, a new file will be started.

* how are history events constructed?

The mlogger creates history events in open_history() by parsing ODB /eq/xxx/variables. Each ODB entry under "variables" is referred to as a "variable".

Each variable can be a single ODB value, an array of ODB values, or a subdirectory (corresponding to TID_STRUCT structured data banks). As each variable
is processed, one or more tags are created to describe it. Single ODB values will generally produce a single tag, while arrays can produce
one single tag - describing the whole array - or multiple tags - one per array element - depending whether the array is "named" or not.

The code can generate two types of history:
- "per-equipment" history will have the tags for all variables concatenated together into one single history event
- "per-variable" history will have one history event defined for each variable. Inside could be one tag - for single odb values and unnamed arrays - or multiple tags - for named arrays and structured data 
banks.

Per-equipment history is the original MIDAS history implementation.

Per-variable history was added to permit efficient data storage in SQL tables. It's initial implementation used 1 ODB hotlink for each variable and it was easy to exceed the maximum permitted number of 
ODB hotlinks (db_open_record()).

To reduce consumption of hotlinks, db_watch() has been implemented and now per-variable history only uses 1 ODB hotlink per equipment.

With db_watch, per-equipment history is no longer available. per-variable history is the new default (and the only option).

* how are the history event tags constructed?

(quirk - single odb values are treated as arrays of length "1")

FIXME: single odb values should be treated as such, /eq/xxx/settings/names should not be applied

(quirk - "string" ODB entries are not permitted)

FIXME - single odb values of type TID_STRING should be possible with SQL, FILE and MIDAS history. arrays of strings is impossible "struct TAG" does not have a data field for string length - only n_data and 
item length implied through it's TID.

History event tags are constructed in the mlogger add_equipment().

For variables of type TID_KEY (subdirectories, corresponding to TID_STRUCT structured banks), one tag is generated for each subdirectory entry. Tag names for /eq/xxx/var/aaa/bbb will be "aaa_bbb". 
(with an underscore).

FIXME: subdirectory entries of type TID_KEY and TID_LINK should be explicitly forbidden.
FIXME: TID_KEY could be supported by replacing db_get_data() with db_get_record() in watch_history().
FIXME: TID_LINK could be supported by adding db_watch() on the link target.

For named arrays, individual tags are generated for each array element. Tag names are taken from the names array. For empty tag names (empty names array), tags are "aaa_0", "aaa_1", etc (for 
/eq/xxx/var/aaa). For "single names" arrays, tag names have the variable name appended (with a space), for /eq/xxx/var/aaa and an empty names array, tags will be "aaa_0 aaa", "aaa_1 aaa", etc. For 
populated names array, the tags will be "name0 aaa", "name1 aaa", etc.

For unnamed arrays and single odb variables (in ODB, single odb variables are arrays of length 1), a single tag is generated.

For TID_LINK variables what happens? FIXME!

FIXME: support TID_LINK variables by correctly parsing the link target and setting a db_watch() on the link target.

Named arrays have a "Names" entry in /eq/xxx/settings. For example, to add names to /eq/xxx/var/aaa, create a string array "/eq/xxx/settings/names aaa". The names array should be at least as long as 
the corresponding data array. Individual entries in the names array can be left blank (tag names will be "aaa_0", "aaa_1", etc). Duplicate tag names are not permitted.

A single "Names" entry can be created to name all arrays in variables with the same names ("single names"). Create /eq/xxx/settings/names" and arrays /eq/xxx/var/aaa and /eq/xxx/var/bbb will have 
history tags "name0 aaa", "name1 aaa", "name0 bbb", "name1 bbb", etc. If "names" are left blank, tag names will be "aaa_0 aaa", "aaa_1 aaa", "bbb_0 bbb", "bbb_1 bbb", etc.

In the mhttpd variables viewer, "single name" arrays are displayed in a 2D table.

* /history/links history

History events are created for each entry under /history/links.

Two types of links are permitted:

/history/links/aaa is a link to a subdirectory: db_watch() is setup to watch this subdirectory, tags are created for each subdirectory entry (1 tag per entry). There is no possibility for naming array elements, so 1 tag per array, regardless of the number of elements.

/history/links/bbb is a subdirectory with links to odb values: db_watch is setup to watch each link target, tags are created for each link (1 tag per link). tag name is the link name (NOT the target name). There is no possibility for naming array elements.

FIXME: Mixing links and subdirectories is not permitted, but could be done - additional db_watch() will need to be done on any links.

Update period history events created for /history/links is controlled by entries in "/history/links periods". Numeric values of periods are same as for equipment histories. Numeric value 0 disables the history for a particular event.

K.O.
    Reply  24 Aug 2015, Konstantin Olchanski, Info, note on midas history 
> 
> *
    Reply  01 Sep 2015, Konstantin Olchanski, Info, note on midas history 
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